Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1085c_(-)_1209761_1210489
DateWed Jul 31 22:05:16 BST 2019
Unique Job ID50c4648a5c3e4e5c
SequenceMSGQADTATT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:36.487 Y:52.163 Z:42.068
Model (left) based on template c3wxvA_
Top template information
PDB header:membrane protein/immune system
Chain: A: PDB Molecule:adiponectin receptor protein 1;
PDBTitle: crystal structure of the human adiponectin receptor 1
Confidence and coverage
Confidence:100.0% Coverage: 86%
207 residues ( 86% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3wxvA_



100.0 20
PDB header:membrane protein/immune system
Chain: A: PDB Molecule:adiponectin receptor protein 1;
PDBTitle: crystal structure of the human adiponectin receptor 1
2c6g7oA_



98.0 15
PDB header:membrane protein
Chain: A: PDB Molecule:alkaline ceramidase 3,soluble cytochrome b562;
PDBTitle: crystal structure of human alkaline ceramidase 3 (acer3) at 2.72 angstrom resolution
3c4ymkA_



45.3 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:acyl-coa desaturase 1;
PDBTitle: crystal structure of stearoyl-coenzyme a desaturase 1
4d1xl3c1



26.4 25
Fold:Type III secretion system domain
Superfamily:Type III secretion system domain
Family:TyeA-like
5c6adqP_



25.5 10
PDB header:electron transport
Chain: P: PDB Molecule:prokaryotic respiratory supercomplex associate factor 1
PDBTitle: respiratory complex ciii2civ2sod2 from mycobacterium smegmatis
6c4pguA_



20.3 7
PDB header:membrance protein
Chain: A: PDB Molecule:uncharacterized protein yetj;
PDBTitle: crystal structure of yetj from bacillus subtilis at ph 7 by soaking
7c2khsB_



17.8 15
PDB header:hydrolase
Chain: B: PDB Molecule:nuclease;
PDBTitle: solution structure of snase121:snase(111-143) complex
8c5ajaC_



17.3 25
PDB header:viral protein
Chain: C: PDB Molecule:sam domain and hd domain-containing protein;
PDBTitle: crystal structure of mandrill samhd1 (amino acid residues 1-114)2 bound to vpx isolated from mandrill and human dcaf1 (amino3 acid residues 1058-1396)
9d1dxsa_



17.2 15
Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
10d2e74g1



14.7 38
Fold:Single transmembrane helix
Superfamily:PetG subunit of the cytochrome b6f complex
Family:PetG subunit of the cytochrome b6f complex
11c1vf5G_



14.5 38
PDB header:photosynthesis
Chain: G: PDB Molecule:protein pet g;
PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus
12d1vf5g_



14.5 38
Fold:Single transmembrane helix
Superfamily:PetG subunit of the cytochrome b6f complex
Family:PetG subunit of the cytochrome b6f complex
13c6bwdC_



12.3 12
PDB header:membrane protein
Chain: C: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: 3.7 angstrom cryoem structure of truncated mouse trpm7
14c6bwdD_



12.3 12
PDB header:membrane protein
Chain: D: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: 3.7 angstrom cryoem structure of truncated mouse trpm7
15c6bwdA_



12.3 12
PDB header:membrane protein
Chain: A: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: 3.7 angstrom cryoem structure of truncated mouse trpm7
16c6bwdB_



12.3 12
PDB header:membrane protein
Chain: B: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: 3.7 angstrom cryoem structure of truncated mouse trpm7
17c6bwfA_



11.7 14
PDB header:membrane protein
Chain: A: PDB Molecule:trpm7;
PDBTitle: 4.1 angstrom mg2+-unbound structure of mouse trpm7
18c6bwfD_



11.7 14
PDB header:membrane protein
Chain: D: PDB Molecule:trpm7;
PDBTitle: 4.1 angstrom mg2+-unbound structure of mouse trpm7
19c6bwfB_



11.7 14
PDB header:membrane protein
Chain: B: PDB Molecule:trpm7;
PDBTitle: 4.1 angstrom mg2+-unbound structure of mouse trpm7
20c6bwfC_



11.7 14
PDB header:membrane protein
Chain: C: PDB Molecule:trpm7;
PDBTitle: 4.1 angstrom mg2+-unbound structure of mouse trpm7
21c1yq3C_



not modelled 10.9 9
PDB header:oxidoreductase
Chain: C: PDB Molecule:succinate dehydrogenase cytochrome b, large subunit;
PDBTitle: avian respiratory complex ii with oxaloacetate and ubiquinone
22c5zx5D_



not modelled 9.7 14
PDB header:transferase
Chain: D: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: 3.3 angstrom structure of mouse trpm7 with edta
23c2e76G_



not modelled 9.7 35
PDB header:photosynthesis
Chain: G: PDB Molecule:cytochrome b6-f complex subunit 5;
PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus
24c4lmoB_



not modelled 9.5 19
PDB header:rna binding protein
Chain: B: PDB Molecule:telomerase reverse transcriptase;
PDBTitle: structure of a vertebrate rna binding domain of telomerase (trbd)
25c4h9kA_



not modelled 9.0 19
PDB header:hydrolase
Chain: A: PDB Molecule:hog cholera virus;
PDBTitle: crystal structure of cleavage site mutant of npro of classical swine2 fever virus.
26c3ahrA_



not modelled 8.2 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:ero1-like protein alpha;
PDBTitle: inactive human ero1
27c1rue4_



not modelled 8.0 25
PDB header:virus
Chain: 4: PDB Molecule:rhinovirus 14;
PDBTitle: rhinovirus 14 site directed mutant n1219a complexed with2 antiviral compound win 52035
28c3u5gh_



not modelled 7.5 15
PDB header:ribosome
Chain: H: PDB Molecule:40s ribosomal protein s7-a;
PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution. this2 entry contains proteins of the 40s subunit, ribosome b
29d1rp4a_



not modelled 7.4 12
Fold:ERO1-like
Superfamily:ERO1-like
Family:ERO1-like
30c2koeA_



not modelled 7.4 13
PDB header:membrane protein, signaling protein
Chain: A: PDB Molecule:human cannabinoid receptor 1 - helix 7/8 peptide;
PDBTitle: human cannabinoid receptor 1 - helix 7/8 peptide
31c6p25A_



not modelled 7.1 10
PDB header:transferase
Chain: A: PDB Molecule:dolichyl-phosphate-mannose--protein mannosyltransferase 1;
PDBTitle: structure of s. cerevisiae protein o-mannosyltransferase pmt1-pmt22 complex bound to the sugar donor and a peptide acceptor
32c5o6vE_



not modelled 7.0 15
PDB header:virus
Chain: E: PDB Molecule:small envelope protein m;
PDBTitle: the cryo-em structure of tick-borne encephalitis virus complexed with2 fab fragment of neutralizing antibody 19/1786
33d1jjga_



not modelled 6.5 6
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
34c3t98A_



not modelled 6.3 30
PDB header:protein transport
Chain: A: PDB Molecule:nuclear pore complex protein nup54;
PDBTitle: molecular architecture of the transport channel of the nuclear pore2 complex: nup54/nup58
35d2v4ja2



not modelled 6.3 19
Fold:Ferredoxin-like
Superfamily:Nitrite/Sulfite reductase N-terminal domain-like
Family:DsrA/DsrB N-terminal-domain-like
36c6aksD_



not modelled 6.1 11
PDB header:virus
Chain: D: PDB Molecule:vp4;
PDBTitle: cryo-em structure of cva10 mature virus
37c1dgi4_



not modelled 5.9 24
PDB header:virus/viral protein, receptor
Chain: 4: PDB Molecule:vp4;
PDB Fragment:poliovirus fragments vp1,vp2,vp3,vp4; PDBTitle:
38c2r4gA_



not modelled 5.8 4
PDB header:transferase
Chain: A: PDB Molecule:telomerase reverse transcriptase;
PDBTitle: the high resolution structure of the rna-binding domain of telomerase
39c6iuaB_



not modelled 5.7 29
PDB header:transport protein/protein binding
Chain: B: PDB Molecule:peptide from tp53-binding protein 1;
PDBTitle: crystal structure of importin-alpha1 bound to the 53bp1 nuclear2 localization signal (s1678d)
40c4bz4D_



not modelled 5.7 18
PDB header:copper-binding protein
Chain: D: PDB Molecule:copper-repressible polypeptide;
PDBTitle: cora is a surface-associated copper-binding protein2 important in methylomicrobium album bg8 copper acquisition
41c5o6vF_



not modelled 5.6 19
PDB header:virus
Chain: F: PDB Molecule:small envelope protein m;
PDBTitle: the cryo-em structure of tick-borne encephalitis virus complexed with2 fab fragment of neutralizing antibody 19/1786
42c2k9pA_



not modelled 5.4 12
PDB header:membrane protein
Chain: A: PDB Molecule:pheromone alpha factor receptor;
PDBTitle: structure of tm1_tm2 in lppg micelles
43c3vbhD_



not modelled 5.3 11
PDB header:virus
Chain: D: PDB Molecule:genome polyprotein, capsid protein vp4;
PDBTitle: crystal structure of formaldehyde treated human enterovirus 71 (space2 group r32)

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below