Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1087_(PE_PGRS21)_1211565_1213868
DateWed Jul 31 22:05:16 BST 2019
Unique Job ID3ef483fac507703d
SequenceMSFVVVAPEV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:52.792 Y:50.198 Z:2971.889
Model (left) based on template c1ygvA_
Top template information
PDB header:structural protein/contractile protein
Chain: A: PDB Molecule:collagen i alpha 1;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule: rigid refinment
Confidence and coverage
Confidence:100.0% Coverage:100%
766 residues (100% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Warning: 90% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1ygvA_
100.0 25
PDB header:structural protein/contractile protein
Chain: A: PDB Molecule:collagen i alpha 1;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule: rigid refinment
2c3hqvB_
100.0 26
PDB header:structural protein, contractile protein
Chain: B: PDB Molecule:collagen alpha-2(i) chain;
PDBTitle: low resolution, molecular envelope structure of type i2 collagen in situ determined by fiber diffraction. single3 type i collagen molecule, rigid body refinement
3c1y0fB_
100.0 25
PDB header:structural protein/contractile protein
Chain: B: PDB Molecule:collagen i alpha 2;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule
4c5xfsA_
99.2 50
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
5d2g38a1
99.1 30
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PE
6c2g38A_
99.1 30
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
7c3bogB_
98.2 37
PDB header:antifreeze protein
Chain: B: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein quasi-racemate
8c3bogA_
98.2 37
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein quasi-racemate
9c2pneA_
98.0 29
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: crystal structure of the snow flea antifreeze protein
10c3boiB_
98.0 29
PDB header:antifreeze protein
Chain: B: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein racemate
11c3boiA_
98.0 29
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein racemate
12c1nayC_
96.6 22
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: gpp-foldon:x-ray structure
13c5ctdB_
96.5 25
PDB header:structural protein
Chain: B: PDB Molecule:collagen alpha-2(i) chain,collagen alpha-2(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen
14c5ctiC_
96.4 25
PDB header:structural protein
Chain: C: PDB Molecule:collagen alpha-1(i) chain,collagen alpha-3(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen (native form)
15c5ctdA_
96.3 25
PDB header:structural protein
Chain: A: PDB Molecule:collagen alpha-1(i) chain,collagen alpha-1(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen
16c2klwA_
87.0 23
PDB header:de novo protein
Chain: A: PDB Molecule:(pkg)10;
PDBTitle: solution structure of an abc collagen heterotrimer reveals a2 single-register helix stabilized by electrostatic3 interactions
17c1k6fF_
65.0 28
PDB header:structural protein
Chain: F: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
18c1k6fB_
65.0 28
PDB header:structural protein
Chain: B: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
19c1k6fA_
65.0 28
PDB header:structural protein
Chain: A: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
20c1k6fD_
65.0 28
PDB header:structural protein
Chain: D: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
21c1k6fE_
not modelled 65.0 28
PDB header:structural protein
Chain: E: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
22c1k6fC_
not modelled 65.0 28
PDB header:structural protein
Chain: C: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
23c2cuoC_
not modelled 59.6 33
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
24c2cuoF_
not modelled 59.6 33
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
25c2cuoD_
not modelled 37.0 31
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
26c2cuoB_
not modelled 37.0 31
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
27c2cuoA_
not modelled 37.0 31
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
28c2cuoE_
not modelled 37.0 31
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
29c3ah9F_
not modelled 35.6 31
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
30c3ah9D_
not modelled 34.0 30
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
31c3ah9C_
not modelled 31.6 32
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
32c3ah9B_
not modelled 31.6 32
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
33c3ah9E_
not modelled 31.6 32
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
34c3ah9A_
not modelled 30.1 33
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
35c3a0mF_
not modelled 28.2 31
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
36d2imha1
not modelled 15.1 29
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:SPO2555-like
37c3a19B_
not modelled 14.1 41
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
38c2d3hA_
not modelled 14.1 41
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
39c2d3hB_
not modelled 14.1 41
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
40c2d3hC_
not modelled 12.4 41
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
41c3a19A_
not modelled 12.4 41
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
42c3a19C_
not modelled 10.9 41
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
43c3a19E_
not modelled 10.9 41
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
44c3a08C_
not modelled 8.7 40
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
45c2d3hE_
not modelled 8.3 38
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
46c3a19D_
not modelled 7.8 38
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
47c3a08E_
not modelled 7.7 40
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
48c3a19F_
not modelled 7.3 40
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
49c3a08D_
not modelled 7.3 40
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
50c2d3hD_
not modelled 7.3 40
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
51c3a0mE_
not modelled 6.9 45
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
52c3a08A_
not modelled 6.2 38
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
53c3a08B_
not modelled 6.2 38
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
54c3a0mA_
not modelled 6.2 45
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
55c4auoH_
not modelled 5.1 45
PDB header:hydrolase/peptide
Chain: H: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide

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