Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1088_(PE9)_1214518_1214952
DateWed Jul 31 22:05:16 BST 2019
Unique Job ID5eacfc8443444a31
SequenceMSYMIATPAA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:40.717 Y:35.740 Z:53.063
Model (left) based on template c5xfsA_
Top template information
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 54%
78 residues ( 54% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsA_



100.0 42
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2d2g38a1



100.0 30
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PE
3c2g38A_



100.0 30
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
4c3gvmA_



79.6 13
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
5c4iogD_



75.4 13
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
6c4wj2A_



67.9 9
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
7c2vs0B_



66.5 7
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
8d1wa8a1



63.1 11
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
9c3zbhC_



47.1 15
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
10c2y0mB_



32.3 41
PDB header:transcription
Chain: B: PDB Molecule:male-specific lethal 1 homolog;
PDBTitle: crystal structure of the complex between dosage2 compensation factors msl1 and mof
11d1lghb_



26.3 20
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
12c3lphD_



21.5 27
PDB header:viral protein
Chain: D: PDB Molecule:protein rev;
PDBTitle: crystal structure of the hiv-1 rev dimer
13d1bg1a1



19.4 47
Fold:STAT-like
Superfamily:STAT
Family:STAT
14c1wrgA_



16.9 14
PDB header:membrane protein
Chain: A: PDB Molecule:light-harvesting protein b-880, beta chain;
PDBTitle: light-harvesting complex 1 beta subunit from wild-type2 rhodospirillum rubrum
15c4lwsA_



16.6 17
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
16c1g70B_



14.7 64
PDB header:viral protein/rna
Chain: B: PDB Molecule:rsg-1.2 peptide;
PDBTitle: complex of hiv-1 rre-iib rna with rsg-1.2 peptide
17c4lwsB_



14.1 11
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
18c2x7lP_



13.9 29
PDB header:immune system
Chain: P: PDB Molecule:protein rev;
PDBTitle: implications of the hiv-1 rev dimer structure at 3.2a resolution for2 multimeric binding to the rev response element
19c3onjA_



13.6 13
PDB header:protein transport
Chain: A: PDB Molecule:t-snare vti1;
PDBTitle: crystal structure of yeast vti1p_habc domain
20d1bf5a1



12.2 47
Fold:STAT-like
Superfamily:STAT
Family:STAT
21c3zs9C_



not modelled 11.1 50
PDB header:hydrolase/transport protein
Chain: C: PDB Molecule:golgi to er traffic protein 2;
PDBTitle: s. cerevisiae get3-adp-alf4- complex with a cytosolic get2 fragment
22c6et5u_



not modelled 11.1 21
PDB header:photosynthesis
Chain: U: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
23c4rglA_



not modelled 10.7 18
PDB header:dna binding protein
Chain: A: PDB Molecule:filamentation induced by camp protein fic;
PDBTitle: crystal structure of a fic family protein (dde_2494) from2 desulfovibrio desulfuricans g20 at 2.70 a resolution
24c4qlbG_



not modelled 9.2 13
PDB header:transferase
Chain: G: PDB Molecule:protein gyg-1, isoform b;
PDBTitle: structural basis for the recruitment of glycogen synthase by2 glycogenin
25c3sjdE_



not modelled 9.0 50
PDB header:hydrolase/transport protein
Chain: E: PDB Molecule:golgi to er traffic protein 2;
PDBTitle: crystal structure of s. cerevisiae get3 with bound adp-mg2+ in complex2 with get2 cytosolic domain
26c3sjdD_



not modelled 9.0 50
PDB header:hydrolase/transport protein
Chain: D: PDB Molecule:golgi to er traffic protein 2;
PDBTitle: crystal structure of s. cerevisiae get3 with bound adp-mg2+ in complex2 with get2 cytosolic domain
27d1f0la3



not modelled 8.8 35
Fold:Toxins' membrane translocation domains
Superfamily:Diphtheria toxin, middle domain
Family:Diphtheria toxin, middle domain
28c5y88S_



not modelled 8.3 54
PDB header:splicing
Chain: S: PDB Molecule:pre-mrna-processing factor 17;
PDBTitle: cryo-em structure of the intron-lariat spliceosome ready for2 disassembly from s.cerevisiae at 3.5 angstrom
29c4jo8B_



not modelled 8.3 50
PDB header:immune system/viral protein
Chain: B: PDB Molecule:killer cell lectin-like receptor 8;
PDBTitle: crystal structure of the activating ly49h receptor in complex with2 m157 (g1f strain)
30c2w0cR_



not modelled 7.5 17
PDB header:virus
Chain: R: PDB Molecule:protein p3;
PDBTitle: x-ray structure of the entire lipid-containing bacteriophage pm2
31d2ga1a1



not modelled 7.5 45
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Alr1493-like
32c4hg6A_



not modelled 7.0 27
PDB header:transferase
Chain: A: PDB Molecule:cellulose synthase subunit a;
PDBTitle: structure of a cellulose synthase - cellulose translocation2 intermediate
33c3ukzC_



not modelled 6.7 63
PDB header:protein transport/protein binding
Chain: C: PDB Molecule:nuclear cap-binding protein subunit 1;
PDBTitle: mouse importin alpha: mouse cbp80 cnls complex
34c3ul0C_



not modelled 6.6 63
PDB header:protein transport/protein binding
Chain: C: PDB Molecule:nuclear cap-binding protein subunit 1;
PDBTitle: mouse importin alpha: mouse cbp80y8d cnls complex
35c1qfqB_



not modelled 6.2 30
PDB header:transcription/rna
Chain: B: PDB Molecule:36-mer n-terminal peptide of the n protein;
PDBTitle: bacteriophage lambda n-protein-nutboxb-rna complex
36c5firH_



not modelled 6.1 44
PDB header:hydrolase
Chain: H: PDB Molecule:paxt-1;
PDBTitle: crystal structure of c. elegans xrn2 in complex with the2 xrn2-binding domain of paxt-1
37c4qlbH_



not modelled 6.0 20
PDB header:transferase
Chain: H: PDB Molecule:protein gyg-1, isoform b;
PDBTitle: structural basis for the recruitment of glycogen synthase by2 glycogenin
38c2m1aA_



not modelled 5.8 67
PDB header:viral protein
Chain: A: PDB Molecule:hiv-1 rev arginine-rich motif (arm);
PDBTitle: hiv-1 rev arm peptide (residues t34-r50)
39c3zmnA_



not modelled 5.7 78
PDB header:viral protein
Chain: A: PDB Molecule:vp17;
PDBTitle: vp17, a capsid protein of bacteriophage p23-77
40c1etfB_



not modelled 5.5 67
PDB header:viral protein/rna
Chain: B: PDB Molecule:rev peptide;
PDBTitle: rev response element (rre) rna complexed with rev peptide,2 nmr, minimized average structure
41c1etgB_



not modelled 5.5 67
PDB header:viral protein/rna
Chain: B: PDB Molecule:rev peptide;
PDBTitle: rev response element (rre) rna complexed with rev peptide,2 nmr, 19 structures
42c2gqcA_



not modelled 5.3 56
PDB header:hydrolase
Chain: A: PDB Molecule:rhomboid intramembrane protease;
PDBTitle: solution structure of the n-terminal domain of rhomboid intramembrane2 protease from p. aeruginosa
43c2npiC_



not modelled 5.2 33
PDB header:transcription
Chain: C: PDB Molecule:protein pcf11;
PDBTitle: clp1-atp-pcf11 complex

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