Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1117_(-)_1241638_1241961
DateWed Jul 31 22:05:20 BST 2019
Unique Job IDf61134800b0c6eaa
SequenceMIFIVVKFET ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:34.302 Y:32.917 Z:40.523
Model (left) based on template c3bm7A_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein of unknown function with ferredoxin-like fold;
PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (cc_2132) from caulobacter crescentus cb15 at 1.35 a resolution
Confidence and coverage
Confidence: 99.9% Coverage: 87%
93 residues ( 87% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3bm7A_



99.9 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein of unknown function with ferredoxin-like fold;
PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (cc_2132) from caulobacter crescentus cb15 at 1.35 a resolution
2c4dpoA_



99.9 26
PDB header:unknown function
Chain: A: PDB Molecule:conserved protein;
PDBTitle: crystal structure of a conserved protein mm_1583 from methanosarcina2 mazei go1
3d2pd1a1



99.9 22
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
4c2omoC_



99.9 21
PDB header:oxidoreductase
Chain: C: PDB Molecule:duf176;
PDBTitle: putative antibiotic biosynthesis monooxygenase from nitrosomonas2 europaea
5c3e8oB_



99.9 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:uncharacterized protein with ferredoxin-like fold;
PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (dr_2100) from deinococcus radiodurans at 1.40 a resolution
6c3mcsB_



99.9 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative monooxygenase;
PDBTitle: crystal structure of putative monooxygenase (fn1347) from2 fusobacterium nucleatum subsp. nucleatum atcc 25586 at 2.55 a3 resolution
7c2bbeA_



99.9 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein so0527;
PDBTitle: crystal structure of protein so0527 from shewanella oneidensis
8d2omoa1



99.9 22
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
9d1tuva_



99.9 15
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
10c4zosA_



99.9 25
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein ye0340 from yersinia enterocolitica subsp.
PDBTitle: 2.20 angstrom resolution crystal structure of protein ye0340 of2 unidentified function from yersinia enterocolitica subsp.3 enterocolitica 8081]
11c4dn9B_



99.9 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of putative antibiotic biosynthesis monooxygenase2 from chloroflexus aurantiacus j-10-fl
12c2gffB_



99.9 19
PDB header:sugar binding protein
Chain: B: PDB Molecule:lsrg protein;
PDBTitle: crystal structure of yersinia pestis lsrg
13c3gz7B_



99.9 16
PDB header:biosynthetic protein
Chain: B: PDB Molecule:putative antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of putative antibiotic biosynthesis monooxygenase2 (np_888398.1) from bordetella bronchiseptica at 2.15 a resolution
14c2fb0A_



99.9 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical protein;
PDBTitle: crystal structure of conserved protein of unknown function from2 bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution, possible3 oxidoreductase
15c4hl9B_



99.9 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of antibiotic biosynthesis monooxygenase
16d1y0ha_



99.9 21
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
17c3fgvB_



99.9 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:uncharacterized protein with ferredoxin-like fold;
PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (spo2313) from silicibacter pomeroyi dss-3 at 1.30 a resolution
18d1x7va_



99.9 23
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
19c3kkfA_



99.8 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of putative antibiotic biosynthesis monooxygenase2 (np_810307.1) from bacteriodes thetaiotaomicron vpi-5482 at 1.30 a3 resolution
20c3f44A_



99.8 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative monooxygenase;
PDBTitle: crystal structure of putative monooxygenase (yp_193413.1) from2 lactobacillus acidophilus ncfm at 1.55 a resolution
21d1iuja_



not modelled 99.8 13
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
22c3kngA_



not modelled 99.8 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:snoab;
PDBTitle: crystal structure of snoab, a cofactor-independent oxygenase2 from streptomyces nogalater, determined to 1.9 resolution
23d1q8ba_



not modelled 99.8 15
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Hypothetical protein YjcS
24c3hx9B_



not modelled 99.7 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:protein rv3592;
PDBTitle: structure of heme-degrader, mhud (rv3592), from2 mycobacterium tuberculosis with two hemes bound in its3 active site
25d2zdpa1



not modelled 99.5 13
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
26c6fxdB_



not modelled 99.5 18
PDB header:biosynthetic protein
Chain: B: PDB Molecule:mupz;
PDBTitle: crystal structure of mupz from pseudomonas fluorescens
27c3tvzA_



not modelled 99.4 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative uncharacterized protein yhgc;
PDBTitle: structure of bacillus subtilis hmob
28c5f9pA_



not modelled 99.4 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:anthrone oxidase-like protein;
PDBTitle: crystal structure study of anthrone oxidase-like protein
29c3fj2A_



not modelled 99.3 6
PDB header:unknown function
Chain: A: PDB Molecule:monooxygenase-like protein;
PDBTitle: crystal structure of a monooxygenase-like protein (lin2316) from2 listeria innocua at 1.85 a resolution
30c2rilA_



not modelled 99.3 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of a putative monooxygenase (yp_001095275.1) from2 shewanella loihica pv-4 at 1.26 a resolution
31d1xbwa_



not modelled 99.1 12
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
32d1tz0a_



not modelled 99.1 13
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
33c4ae5C_



not modelled 99.1 15
PDB header:signaling protein
Chain: C: PDB Molecule:signal transduction protein trap;
PDBTitle: structure of a major regulator of staphylococcal pathogenesis
34d1lq9a_



not modelled 98.8 21
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Actinorhodin biosynthesis monooxygenase ActVa-Orf6
35c5ixuA_



not modelled 98.3 7
PDB header:structural genomics/unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized nipsnap domain protein from2 burkholderia xenovorans
36c3bn7A_



not modelled 98.0 11
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein (cc_2267) from2 caulobacter crescentus cb15 at 1.64 a resolution
37c5y02D_



not modelled 98.0 12
PDB header:lyase
Chain: D: PDB Molecule:hydroxynitrile lyase;
PDBTitle: c-terminal peptide depleted mutant of hydroxynitrile lyase from2 passiflora edulis (pehnl) bound with (r)-mandelonitrile
38d1tr0a_



not modelled 98.0 13
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
39c5k9fA_



not modelled 97.9 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:nipsnap domain protein;
PDBTitle: crystal structure of a nipsnap domain protein from burkholderia2 xenovorans
40d1vqsa_



not modelled 97.7 11
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:NIPSNAP
41c2qycA_



not modelled 97.7 11
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein (bb1511) from2 bordetella bronchiseptica rb50 at 1.90 a resolution
42d1vqya1



not modelled 97.7 15
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:NIPSNAP
43c3hfkB_



not modelled 97.7 18
PDB header:isomerase
Chain: B: PDB Molecule:4-methylmuconolactone methylisomerase;
PDBTitle: crystal structure of 4-methylmuconolactone methylisomerase (h52a) in2 complex with 4-methylmuconolactone
44c3bdeA_



not modelled 97.6 16
PDB header:unknown function
Chain: A: PDB Molecule:mll5499 protein;
PDBTitle: crystal structure of a dabb family protein with a ferredoxin-like fold2 (mll5499) from mesorhizobium loti maff303099 at 1.79 a resolution
45d1q4ra_



not modelled 97.6 14
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
46d2cb2a1



not modelled 97.5 20
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:SOR-like
47c3bguA_



not modelled 97.5 14
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein of unknown function;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein of unknown2 function (tfu_0763) from thermobifida fusca yx at 1.50 a resolution
48c5kakE_



not modelled 97.5 13
PDB header:unknown function
Chain: E: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized nipsnap-like domain protein2 from burkholderia xenovorans
49d1rjja_



not modelled 97.3 7
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
50c3bb5B_



not modelled 97.2 14
PDB header:unknown function
Chain: B: PDB Molecule:stress responsive alpha-beta protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein of unknown2 function (jann_3925) from jannaschia sp. ccs1 at 2.30 a resolution
51d1x8da1



not modelled 97.2 13
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:YiiL-like
52c3fmbA_



not modelled 97.2 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:dimeric protein of unknown function and ferredoxin-like
PDBTitle: crystal structure of dimeric protein of unknown function and2 ferredoxin-like fold (yp_212648.1) from bacteroides fragilis nctc3 9343 at 1.85 a resolution
53c5b0aA_



not modelled 96.7 9
PDB header:lyase
Chain: A: PDB Molecule:olivetolic acid cyclase;
PDBTitle: polyketide cyclase oac from cannabis sativa, h5q mutant
54d2ftra1



not modelled 96.5 11
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:EthD-like
55c2qlwA_



not modelled 96.3 6
PDB header:isomerase
Chain: A: PDB Molecule:rhau;
PDBTitle: crystal structure of rhamnose mutarotase rhau of rhizobium2 leguminosarum
56c2qlxA_



not modelled 96.3 6
PDB header:isomerase
Chain: A: PDB Molecule:l-rhamnose mutarotase;
PDBTitle: crystal structure of rhamnose mutarotase rhau of rhizobium2 leguminosarum in complex with l-rhamnose
57d2go8a1



not modelled 96.0 13
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
58c2jdjB_



not modelled 94.7 14
PDB header:biosynthetic protein
Chain: B: PDB Molecule:redy-like protein;
PDBTitle: crystal structure of hapk from hahella chejuensis
59c3bf4B_



not modelled 91.9 10
PDB header:unknown function
Chain: B: PDB Molecule:ethyl tert-butyl ether degradation ethd protein;
PDBTitle: crystal structure of an ethd-like protein (reut_b5694) from ralstonia2 eutropha jmp134 at 2.10 a resolution
60c3a16C_



not modelled 90.4 8
PDB header:lyase
Chain: C: PDB Molecule:aldoxime dehydratase;
PDBTitle: crystal structure of aldoxime dehydratase (oxdre) in complex2 with propionaldoxime
61c6hhnA_



not modelled 89.3 6
PDB header:isomerase
Chain: A: PDB Molecule:l-rhamnose mutarotase;
PDBTitle: crystal structure of l-rhamnose mutarotase fa22100 from formosa2 agariphila
62d2fiua1



not modelled 87.3 15
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Atu0297-like
63c3lo3E_



not modelled 87.1 14
PDB header:structure genomics, unknown function
Chain: E: PDB Molecule:uncharacterized conserved protein;
PDBTitle: the crystal structure of a conserved functionally unknown protein from2 colwellia psychrerythraea 34h.
64c3dcaC_



not modelled 83.3 13
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:rpa0582;
PDBTitle: crystal structure of the rpa0582- protein of unknown2 function from rhodopseudomonas palustris- a structural3 genomics target
65d2hiqa1



not modelled 83.2 16
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Hypothetical protein YdhR
66c2e1aD_



not modelled 78.1 7
PDB header:transcription
Chain: D: PDB Molecule:75aa long hypothetical regulatory protein asnc;
PDBTitle: crystal structure of ffrp-dm1
67c3gn6B_



not modelled 76.9 13
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ct0912, orfan protein with a ferredoxin-like domain repeat;
PDBTitle: crystal structure of ct0912, orfan protein from chlorobium tepidum2 with a ferredoxin-like domain repeat (np_661805.1) from chlorobium3 tepidum tls at 1.80 a resolution
68c2djwF_



not modelled 71.7 14
PDB header:unknown function
Chain: F: PDB Molecule:probable transcriptional regulator, asnc family;
PDBTitle: crystal structure of ttha0845 from thermus thermophilus hb8
69c2kl8A_



not modelled 69.0 9
PDB header:de novo protein
Chain: A: PDB Molecule:or15;
PDBTitle: solution nmr structure of de novo designed ferredoxin-like fold2 protein, northeast structural genomics consortium target or15
70c1wd6B_



not modelled 63.0 14
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein ydhr;
PDBTitle: crystal structure of jw1657 from escherichia coli
71c4ky3A_



not modelled 56.4 10
PDB header:de novo protein
Chain: A: PDB Molecule:designed protein or327;
PDBTitle: three-dimensional structure of the orthorhombic crystal of2 computationally designed insertion domain , northeast structural3 genomics consortium (nesg) target or327
72c4hhuA_



not modelled 42.0 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:or280;
PDBTitle: crystal structure of engineered protein. northeast structural genomics2 consortium target or280.
73c5cw9A_



not modelled 32.1 8
PDB header:de novo protein
Chain: A: PDB Molecule:de novo designed ferredoxin-ferredoxin domain insertion
PDBTitle: crystal structure of de novo designed ferredoxin-ferredoxin domain2 insertion protein
74d2cs4a1



not modelled 30.8 38
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
75d2cfxa2



not modelled 28.7 16
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
76c1zr9A_



not modelled 19.1 19
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 593;
PDBTitle: solution structure of a human c2h2-type zinc finger protein
77d1zr9a1



not modelled 19.1 19
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:HkH motif-containing C2H2 finger
78d2ifxa1



not modelled 18.0 13
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:MmlI-like
79c2w2iC_



not modelled 16.0 20
PDB header:oxidoreductase
Chain: C: PDB Molecule:2-oxoglutarate oxygenase;
PDBTitle: crystal structure of the human 2-oxoglutarate oxygenase2 loc390245
80d1i1ga2



not modelled 13.3 16
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
81c3or8A_



not modelled 10.0 10
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt6;
PDBTitle: a tandem sh2 domain in transcription elongation factor spt6
82c3opwA_



not modelled 8.3 4
PDB header:oxidoreductase
Chain: A: PDB Molecule:dna damage-responsive transcriptional repressor rph1;
PDBTitle: crystal structure of the rph1 catalytic core
83d2pbza2



not modelled 8.2 10
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:PurP ATP-binding domain-like
84c4jcuC_



not modelled 7.7 11
PDB header:isomerase
Chain: C: PDB Molecule:5-carboxymethyl-2-hydroxymuconate isomerase;
PDBTitle: crystal structure of a 5-carboxymethyl-2-hydroxymuconate isomerase2 from deinococcus radiodurans r1
85d2cyya2



not modelled 7.7 7
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
86c1bmxA_



not modelled 7.3 28
PDB header:viral protein
Chain: A: PDB Molecule:human immunodeficiency virus type 1 capsid;
PDBTitle: hiv-1 capsid protein major homology region peptide analog,2 nmr, 8 structures
87d1fo8a_



not modelled 7.1 13
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:N-acetylglucosaminyltransferase I
88c2dcjA_



not modelled 6.7 20
PDB header:hydrolase
Chain: A: PDB Molecule:xylanase j;
PDBTitle: a two-domain structure of alkaliphilic xynj from bacillus sp. 41m-1
89c5yknA_



not modelled 6.6 9
PDB header:gene regulation
Chain: A: PDB Molecule:probable lysine-specific demethylase jmj14;
PDBTitle: crystal structure of arabidopsis thaliana jmj14 catalytic domain
90c2os2A_



not modelled 6.4 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:jmjc domain-containing histone demethylation protein 3a;
PDBTitle: crystal structure of jmjd2a complexed with histone h3 peptide2 trimethylated at lys36
91c4lbhA_



not modelled 6.4 14
PDB header:lyase
Chain: A: PDB Molecule:5-chloro-2-hydroxyhydroquinone dehydrochlorinase (tftg);
PDBTitle: 5-chloro-2-hydroxyhydroquinone dehydrochlorinase (tftg) from2 burkholderia phenoliruptrix ac1100: apo-form
92c4igpA_



not modelled 6.2 13
PDB header:structural protein
Chain: A: PDB Molecule:os05g0196500 protein;
PDBTitle: histone h3 lysine 4 demethylating rice jmj703 apo enzyme
93c3bpjD_



not modelled 5.9 8
PDB header:translation
Chain: D: PDB Molecule:eukaryotic translation initiation factor 3 subunit j;
PDBTitle: crystal structure of human translation initiation factor 3, subunit 12 alpha
94c2zbcH_



not modelled 5.7 9
PDB header:transcription
Chain: H: PDB Molecule:83aa long hypothetical transcriptional regulator asnc;
PDBTitle: crystal structure of sts042, a stand-alone ram module protein, from2 hyperthermophilic archaeon sulfolobus tokodaii strain7.
95c4npbA_



not modelled 5.6 11
PDB header:isomerase
Chain: A: PDB Molecule:protein disulfide isomerase ii;
PDBTitle: the crystal structure of thiol:disulfide interchange protein dsbc from2 yersinia pestis co92
96c2uwqA_



not modelled 5.5 17
PDB header:apoptosis
Chain: A: PDB Molecule:apoptosis-stimulating of p53 protein 2;
PDBTitle: solution structure of aspp2 n-terminus
97d1f5ja_



not modelled 5.4 26
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Xylanase/endoglucanase 11/12

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