Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1131_(gltA1)_1256137_1257318
DateWed Jul 31 22:05:21 BST 2019
Unique Job IDa2de23e4edafb24a
SequenceMTGPLAAARS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:61.172 Y:65.585 Z:72.680
Model (left) based on template c3hwkE_
Top template information
PDB header:transferase
Chain: E: PDB Molecule:methylcitrate synthase;
PDBTitle: crystal structure of methylcitrate synthase from mycobacterium2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 93%
367 residues ( 93% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3hwkE_



100.0 100
PDB header:transferase
Chain: E: PDB Molecule:methylcitrate synthase;
PDBTitle: crystal structure of methylcitrate synthase from mycobacterium2 tuberculosis
2c2h12C_



100.0 32
PDB header:transferase
Chain: C: PDB Molecule:citrate synthase;
PDBTitle: structure of acetobacter aceti citrate synthase complexed with2 oxaloacetate and carboxymethyldethia coenzyme a (cmx)
3c3msuA_



100.0 30
PDB header:transferase
Chain: A: PDB Molecule:citrate synthase;
PDBTitle: crystal structure of citrate synthase from francisella tularensis
4d1a59a_



100.0 59
Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
5d1k3pa_



100.0 28
Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
6d1ioma_



100.0 41
Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
7d1aj8a_



100.0 40
Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
8c1vgpA_



100.0 37
PDB header:transferase
Chain: A: PDB Molecule:373aa long hypothetical citrate synthase;
PDBTitle: crystal structure of an isozyme of citrate synthase from sulfolbus2 tokodaii strain7
9c2ibpB_



100.0 38
PDB header:transferase
Chain: B: PDB Molecule:citrate synthase;
PDBTitle: crystal structure of citrate synthase from pyrobaculum aerophilum
10c6abxA_



100.0 38
PDB header:transferase
Chain: A: PDB Molecule:citrate synthase;
PDBTitle: crystal structure of citrate synthase (msed_1522) from metallosphaera2 sedula in complex with citrate
11c1vgmB_



100.0 35
PDB header:transferase
Chain: B: PDB Molecule:378aa long hypothetical citrate synthase;
PDBTitle: crystal structure of an isozyme of citrate synthase from sulfolbus2 tokodaii strain7
12c2c6xA_



100.0 37
PDB header:transferase
Chain: A: PDB Molecule:citrate synthase 1;
PDBTitle: structure of bacillus subtilis citrate synthase
13d1csha_



100.0 23
Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
14c2r26C_



100.0 31
PDB header:transferase
Chain: C: PDB Molecule:citrate synthase;
PDBTitle: the structure of the ternary complex of carboxymethyl2 coenzyme a and oxalateacetate with citrate synthase from3 the thermophilic archaeonthermoplasma acidophilum
15d1o7xa_



100.0 35
Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
16d2ctsa_



100.0 23
Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
17d1csca_



100.0 24
Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
18c3tqgA_



100.0 39
PDB header:transferase
Chain: A: PDB Molecule:2-methylcitrate synthase;
PDBTitle: structure of the 2-methylcitrate synthase (prpc) from coxiella2 burnetii
19c3o8jH_



100.0 38
PDB header:transferase
Chain: H: PDB Molecule:2-methylcitrate synthase;
PDBTitle: crystal structure of 2-methylcitrate synthase (prpc) from salmonella2 typhimurium
20c2p2wA_



100.0 39
PDB header:transferase
Chain: A: PDB Molecule:citrate synthase;
PDBTitle: crystal structure of citrate synthase from thermotoga maritima msb8
21c4tvmA_



not modelled 100.0 33
PDB header:transferase
Chain: A: PDB Molecule:citrate synthase;
PDBTitle: structure of citrate synthase from mycobacterium tuberculosis
22c5uqqD_



not modelled 100.0 21
PDB header:transferase
Chain: D: PDB Molecule:2-methylcitrate synthase, mitochondrial;
PDBTitle: crystal structure of 2-methylcitrate synthase from aspergillus2 fumigatus
23c4xghA_



not modelled 100.0 31
PDB header:transferase
Chain: A: PDB Molecule:citrate synthase;
PDBTitle: x-ray crystal structure of citrate synthase from burkholderia2 thailandensis
24c6hxpA_



not modelled 100.0 25
PDB header:lyase
Chain: A: PDB Molecule:citryl-coa lyase;
PDBTitle: structure of citryl-coa lyase from hydrogenobacter thermophilus
25c6hxjB_



not modelled 100.0 23
PDB header:lyase
Chain: B: PDB Molecule:atp-citrate lyase alpha-subunit;
PDBTitle: structure of atp citrate lyase from chlorobium limicola in complex2 with citrate and coenzyme a.
26c6hxiD_



not modelled 100.0 17
PDB header:lyase
Chain: D: PDB Molecule:succinyl-coa ligase (adp-forming) subunit alpha;
PDBTitle: structure of atp citrate lyase from methanothrix soehngenii in complex2 with citrate and coenzyme a
27c6hxoH_



not modelled 100.0 21
PDB header:lyase
Chain: H: PDB Molecule:atp-citrate lyase alpha-subunit;
PDBTitle: structure of the citryl-coa lyase core module of chlorobium limicola2 atp citrate lyase (space group p21)
28c6hxlD_



not modelled 100.0 22
PDB header:lyase
Chain: D: PDB Molecule:atp-citrate synthase;
PDBTitle: structure of the citryl-coa lyase core module of human atp citrate2 lyase in complex with citrate and coash (space group p21)
29c6qfbB_



not modelled 100.0 25
PDB header:lyase
Chain: B: PDB Molecule:atp-citrate synthase;
PDBTitle: structure of the human atp citrate lyase holoenzyme in complex with2 citrate, coenzyme a and mg.adp
30c6hxoE_



not modelled 100.0 19
PDB header:lyase
Chain: E: PDB Molecule:atp-citrate lyase alpha-subunit;
PDBTitle: structure of the citryl-coa lyase core module of chlorobium limicola2 atp citrate lyase (space group p21)
31c3zeyI_



not modelled 55.9 33
PDB header:ribosome
Chain: I: PDB Molecule:40s ribosomal protein s15, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
32c3j38P_



not modelled 52.6 29
PDB header:ribosome
Chain: P: PDB Molecule:40s ribosomal protein s15, isoform a;
PDBTitle: structure of the d. melanogaster 40s ribosomal proteins
33c2xzmS_



not modelled 49.7 27
PDB header:ribosome
Chain: S: PDB Molecule:rps15e;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
34c3j20T_



not modelled 46.8 43
PDB header:ribosome
Chain: T: PDB Molecule:30s ribosomal protein s19p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
35c5xyiP_



not modelled 38.9 38
PDB header:ribosome
Chain: P: PDB Molecule:ribosomal protein s19, putative;
PDBTitle: small subunit of trichomonas vaginalis ribosome
36c3if8B_



not modelled 34.8 15
PDB header:cell cycle
Chain: B: PDB Molecule:protein zwilch homolog;
PDBTitle: crystal structure of zwilch, a member of the rzz kinetochore complex
37c5xxuP_



not modelled 32.6 29
PDB header:ribosome
Chain: P: PDB Molecule:ribosomal protein us19;
PDBTitle: small subunit of toxoplasma gondii ribosome
38c4ay8B_



not modelled 30.0 11
PDB header:transferase
Chain: B: PDB Molecule:methylcobalamin\: coenzyme m methyltransferase;
PDBTitle: semet-derivative of a methyltransferase from m. mazei
39c1jpkA_



not modelled 23.8 17
PDB header:lyase
Chain: A: PDB Molecule:uroporphyrinogen decarboxylase;
PDBTitle: gly156asp mutant of human urod, human uroporphyrinogen iii2 decarboxylase
40d1poib_



not modelled 23.8 18
Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:CoA transferase beta subunit-like
41c2ly8A_



not modelled 22.3 20
PDB header:chaperone
Chain: A: PDB Molecule:budding yeast chaperone scm3;
PDBTitle: the budding yeast chaperone scm3 recognizes the partially unfolded2 dimer of the centromere-specific cse4/h4 histone variant
42d1r3sa_



not modelled 19.3 17
Fold:TIM beta/alpha-barrel
Superfamily:UROD/MetE-like
Family:Uroporphyrinogen decarboxylase, UROD
43c5n02B_



not modelled 18.6 16
PDB header:lyase
Chain: B: PDB Molecule:glutaconate coa-transferase family, subunit b;
PDBTitle: crystal structure of the decarboxylase aiba/aibb c56s variant
44d2huec1



not modelled 18.1 14
Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
45c3cyvA_



not modelled 14.9 19
PDB header:lyase
Chain: A: PDB Molecule:uroporphyrinogen decarboxylase;
PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism
46c1rr2A_



not modelled 14.7 16
PDB header:transferase
Chain: A: PDB Molecule:transcarboxylase 5s subunit;
PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid
47c6co6B_



not modelled 14.7 17
PDB header:hydrolase
Chain: B: PDB Molecule:probable coa-transferase beta subunit;
PDBTitle: crystal structure of rhodococcus jostii rha1 ipdab
48d1kx5b_



not modelled 14.7 14
Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
49c2nx9B_



not modelled 13.7 12
PDB header:lyase
Chain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha;
PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae
50d1mtyb_



not modelled 13.3 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
51c4y0cB_



not modelled 12.2 10
PDB header:protein binding
Chain: B: PDB Molecule:clp protease-related protein at4g12060, chloroplastic;
PDBTitle: the structure of arabidopsis clpt2
52d1id3b_



not modelled 12.1 12
Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
53c2infB_



not modelled 11.1 11
PDB header:lyase
Chain: B: PDB Molecule:uroporphyrinogen decarboxylase;
PDBTitle: crystal structure of uroporphyrinogen decarboxylase from bacillus2 subtilis
54c3j20S_



not modelled 10.7 16
PDB header:ribosome
Chain: S: PDB Molecule:30s ribosomal protein s17e;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
55c5xxuR_



not modelled 10.6 24
PDB header:ribosome
Chain: R: PDB Molecule:ribosomal protein es17;
PDBTitle: small subunit of toxoplasma gondii ribosome
56c3o30I_



not modelled 10.3 33
PDB header:ribosome
Chain: I: PDB Molecule:40s ribosomal protein s15;
PDBTitle: yeast 80s ribosome. this entry consists of the 40s subunit of the2 second 80s in the asymmetric unit.
57d1khda2



not modelled 10.2 26
Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
58c2l5aA_



not modelled 10.0 20
PDB header:nuclear protein
Chain: A: PDB Molecule:histone h3-like centromeric protein cse4, protein scm3,
PDBTitle: structural basis for recognition of centromere specific histone h32 variant by nonhistone scm3
59c2l0cA_



not modelled 9.5 30
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative membrane protein;
PDBTitle: solution nmr structure of protein sty4237 (residues 36-120) from2 salmonella enterica, northeast structural genomics consortium target3 slr115
60c1j9zB_



not modelled 9.1 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:nadph-cytochrome p450 reductase;
PDBTitle: cypor-w677g
61c5t59D_



not modelled 8.6 17
PDB header:cell cycle
Chain: D: PDB Molecule:klla0f02343p;
PDBTitle: structure of the mind complex shows a regulatory focus of yeast2 kinetochore assembly
62d1mhyb_



not modelled 8.1 21
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
63c3ajvD_



not modelled 7.9 29
PDB header:hydrolase
Chain: D: PDB Molecule:trna-splicing endonuclease;
PDBTitle: splicing endonuclease from aeropyrum pernix
64d1hiod_



not modelled 7.8 25
Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
65c5foeA_



not modelled 7.7 24
PDB header:transferase
Chain: A: PDB Molecule:gdp-fucose protein o-fucosyltransferase 2,thrombospondin-1;
PDBTitle: crystal structure of the c. elegans protein o-fucosyltransferase 22 (cepofut2) double mutant (r298k-r299k) in complex with gdp and the3 human tsr1 from thrombospondin 1
66c3j3aR_



not modelled 7.4 24
PDB header:ribosome
Chain: R: PDB Molecule:40s ribosomal protein s17;
PDBTitle: structure of the human 40s ribosomal proteins
67c5dizB_



not modelled 7.2 15
PDB header:hydrolase
Chain: B: PDB Molecule:proteinaceous rnase p 2;
PDBTitle: crystal structure of nuclear proteinaceous rnase p 2 (prorp2) from a.2 thaliana
68c3t5qA_



not modelled 6.9 17
PDB header:viral protein/rna
Chain: A: PDB Molecule:nucleoprotein;
PDBTitle: 3a structure of lassa virus nucleoprotein in complex with ssrna
69d1mula_



not modelled 6.7 16
Fold:IHF-like DNA-binding proteins
Superfamily:IHF-like DNA-binding proteins
Family:Prokaryotic DNA-bending protein
70c1fctA_



not modelled 6.5 100
PDB header:transit peptide
Chain: A: PDB Molecule:ferredoxin chloroplastic transit peptide
PDBTitle: nmr structures of ferredoxin chloroplastic transit peptide2 from chlamydomonas reinhardtii promoted by3 trifluoroethanol in aqueous solution
71d1orna_



not modelled 6.5 11
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Endonuclease III
72c6efvA_



not modelled 6.5 17
PDB header:flavoprotein
Chain: A: PDB Molecule:sulfite reductase [nadph] flavoprotein alpha-component;
PDBTitle: the nadph-dependent sulfite reductase flavoprotein adopts an extended2 conformation that is unique to this diflavin reductase
73c3dzoA_



not modelled 6.4 23
PDB header:transferase
Chain: A: PDB Molecule:rhoptry kinase domain;
PDBTitle: crystal structure of a rhoptry kinase from toxoplasma gondii
74c4gyxA_



not modelled 6.4 56
PDB header:structural protein, blood clotting
Chain: A: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
75c4gyxB_



not modelled 6.4 56
PDB header:structural protein, blood clotting
Chain: B: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
76c4e2i3_



not modelled 6.4 21
PDB header:hydrolase/dna binding protein
Chain: 3: PDB Molecule:dna polymerase alpha subunit b;
PDBTitle: the complex structure of the sv40 helicase large t antigen and p682 subunit of dna polymerase alpha-primase
77c2kebA_



not modelled 6.4 21
PDB header:dna binding protein
Chain: A: PDB Molecule:dna polymerase subunit alpha b;
PDBTitle: nmr solution structure of the n-terminal domain of the dna polymerase2 alpha p68 subunit
78c3tkaA_



not modelled 6.4 16
PDB header:transferase
Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase h;
PDBTitle: crystal structure and solution saxs of methyltransferase rsmh from2 e.coli
79d1b8za_



not modelled 6.3 38
Fold:IHF-like DNA-binding proteins
Superfamily:IHF-like DNA-binding proteins
Family:Prokaryotic DNA-bending protein
80d2nx2a1



not modelled 6.3 18
Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:YpsA-like
81c5f4tA_



not modelled 6.2 16
PDB header:cell adhesion
Chain: A: PDB Molecule:izumo sperm-egg fusion protein 1;
PDBTitle: crystal structure of the human sperm izumo1 residues 22-254
82c6nmiE_



not modelled 6.2 16
PDB header:transcription
Chain: E: PDB Molecule:general transcription factor iih subunit 2, p44;
PDBTitle: cryo-em structure of the human tfiih core complex
83c4gyxC_



not modelled 6.1 56
PDB header:structural protein, blood clotting
Chain: C: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
84d1uoua2



not modelled 6.0 15
Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
85d1e29a_



not modelled 5.9 11
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:monodomain cytochrome c
86c4dmtC_



not modelled 5.9 56
PDB header:structural protein
Chain: C: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
87c4dmtB_



not modelled 5.9 56
PDB header:structural protein
Chain: B: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
88c4dmtA_



not modelled 5.9 56
PDB header:structural protein
Chain: A: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
89c6hemA_



not modelled 5.9 15
PDB header:hydrolase
Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 25;
PDBTitle: structure of the c-terminal domain of usp25 (748-1048)
90c4ga5H_



not modelled 5.8 11
PDB header:transferase
Chain: H: PDB Molecule:putative thymidine phosphorylase;
PDBTitle: crystal structure of amp phosphorylase c-terminal deletion mutant in2 the apo-form
91d1fhea1



not modelled 5.8 10
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
92c6conF_



not modelled 5.7 27
PDB header:hydrolase
Chain: F: PDB Molecule:coa-transferase subunit beta;
PDBTitle: crystal structure of mycobacterium tuberculosis ipdab
93d2csba3



not modelled 5.7 22
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Topoisomerase V repeat domain
94c2v53D_



not modelled 5.7 56
PDB header:cell adhesion
Chain: D: PDB Molecule:collagen alpha-1(iii) chain;
PDBTitle: crystal structure of a sparc-collagen complex
95c2v53B_



not modelled 5.7 56
PDB header:cell adhesion
Chain: B: PDB Molecule:collagen alpha-1(iii) chain;
PDBTitle: crystal structure of a sparc-collagen complex
96c2v53C_



not modelled 5.7 56
PDB header:cell adhesion
Chain: C: PDB Molecule:collagen alpha-1(iii) chain;
PDBTitle: crystal structure of a sparc-collagen complex
97c4exqA_



not modelled 5.7 19
PDB header:biosynthetic protein
Chain: A: PDB Molecule:uroporphyrinogen decarboxylase;
PDBTitle: crystal structure of uroporphyrinogen decarboxylase (upd) from2 burkholderia thailandensis e264
98d2pbla1



not modelled 5.7 13
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Carboxylesterase
99c1tllA_



not modelled 5.7 28
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitric-oxide synthase, brain;
PDBTitle: crystal structure of rat neuronal nitric-oxide synthase2 reductase module at 2.3 a resolution.

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