1 d2r6gf1
56.9
15
Fold: MalF N-terminal region-likeSuperfamily: MalF N-terminal region-likeFamily: MalF N-terminal region-like
2 c3hi2C_
38.8
33
PDB header: dna binding protein/toxinChain: C: PDB Molecule: hth-type transcriptional regulator mqsa(ygit);
PDBTitle: structure of the n-terminal domain of the e. coli antitoxin mqsa2 (ygit/b3021) in complex with the e. coli toxin mqsr (ygiu/b3022)
3 d1fo1a2
37.6
35
Fold: Ferredoxin-likeSuperfamily: RNA-binding domain, RBDFamily: Non-canonical RBD domain
4 c4gvsA_
34.6
21
PDB header: hydrolaseChain: A: PDB Molecule: methenyltetrahydromethanopterin cyclohydrolase;
PDBTitle: x-ray structure of the archaeoglobus fulgidus methenyl-2 tetrahydromethanopterin cyclohydrolase in complex with n5-formyl-3 tetrahydromethanopterin
5 d1qlma_
33.8
21
Fold: Methenyltetrahydromethanopterin cyclohydrolaseSuperfamily: Methenyltetrahydromethanopterin cyclohydrolaseFamily: Methenyltetrahydromethanopterin cyclohydrolase
6 c2hjjA_
32.8
38
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: hypothetical protein ykff;
PDBTitle: solution nmr structure of protein ykff from escherichia coli.2 northeast structural genomics target er397.
7 d2hjja1
32.8
38
Fold: dsRBD-likeSuperfamily: YcfA/nrd intein domainFamily: YkfF-like
8 d1b4ra_
26.8
83
Fold: Immunoglobulin-like beta-sandwichSuperfamily: PKD domainFamily: PKD domain
9 c4fioA_
25.5
16
PDB header: hydrolaseChain: A: PDB Molecule: methenyltetrahydromethanopterin cyclohydrolase;
PDBTitle: crystal structure of methenyltetrahydromethanopterin cyclohydrolase2 from methanobrevibacter ruminantium
10 d1vkwa_
24.9
33
Fold: FMN-dependent nitroreductase-likeSuperfamily: FMN-dependent nitroreductase-likeFamily: Putative nitroreductase TM1586
11 c3iacA_
24.8
23
PDB header: isomeraseChain: A: PDB Molecule: glucuronate isomerase;
PDBTitle: 2.2 angstrom crystal structure of glucuronate isomerase from2 salmonella typhimurium.
12 c2l6pA_
21.7
22
PDB header: structure genomics, unknown functionChain: A: PDB Molecule: phac1, phac2 and phad genes;
PDBTitle: nmr solution structure of the protein np_253742.1
13 d1j2jb_
20.1
28
Fold: Spectrin repeat-likeSuperfamily: GAT-like domainFamily: GAT domain
14 d1wgoa_
19.7
50
Fold: Immunoglobulin-like beta-sandwichSuperfamily: PKD domainFamily: PKD domain
15 c5jpqi_
19.2
36
PDB header: ribosomeChain: I: PDB Molecule: u3 small nucleolar rna-associated protein 21;
PDBTitle: cryo-em structure of the 90s pre-ribosome
16 c6rdf7_
18.3
31
PDB header: proton transportChain: 7: PDB Molecule: mitochondrial atp synthase associated protein asa7;
PDBTitle: cryoem structure of polytomella f-atp synthase, primary rotary state2 3, monomer-masked refinement
17 c2zpaB_
18.0
36
PDB header: transferaseChain: B: PDB Molecule: uncharacterized protein ypfi;
PDBTitle: crystal structure of trna(met) cytidine acetyltransferase
18 c1x27F_
17.7
23
PDB header: signaling proteinChain: F: PDB Molecule: proto-oncogene tyrosine-protein kinase lck;
PDBTitle: crystal structure of lck sh2-sh3 with sh2 binding site of2 p130cas
19 c2l6nA_
17.6
35
PDB header: structure genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein yp_001092504.1;
PDBTitle: nmr solution structure of the protein yp_001092504.1
20 c4yubB_
17.3
15
PDB header: ligaseChain: B: PDB Molecule: nicotinate phosphoribosyltransferase;
PDBTitle: crystal structure of human nicotinic acid phosphoribosyltransferase
21 c4umoB_
not modelled
17.1
21
PDB header: signaling proteinChain: B: PDB Molecule: potassium voltage-gated channel subfamily kqt member 1;
PDBTitle: crystal structure of the kv7.1 proximal c-terminal domain in complex2 with calmodulin
22 c3iynR_
not modelled
16.5
56
PDB header: virusChain: R: PDB Molecule: hexon-associated protein;
PDBTitle: 3.6-angstrom cryoem structure of human adenovirus type 5
23 c5n4cF_
not modelled
16.0
47
PDB header: hydrolaseChain: F: PDB Molecule: alpha-amanitin proprotein;
PDBTitle: prolyl oligopeptidase b from galerina marginata bound to 35mer2 hydrolysis and macrocyclization substrate - s577a mutant
24 d1kpta_
not modelled
15.4
17
Fold: Yeast killer toxinsSuperfamily: Yeast killer toxinsFamily: Virally encoded KP4 toxin
25 d1c0pa1
not modelled
15.3
11
Fold: Nucleotide-binding domainSuperfamily: Nucleotide-binding domainFamily: D-aminoacid oxidase, N-terminal domain
26 c3iynQ_
not modelled
14.9
56
PDB header: virusChain: Q: PDB Molecule: hexon-associated protein;
PDBTitle: 3.6-angstrom cryoem structure of human adenovirus type 5
27 c4xedA_
not modelled
14.7
50
PDB header: protein bindingChain: A: PDB Molecule: peptidase m14, carboxypeptidase a;
PDBTitle: pkd domain of m14-like peptidase from thermoplasmatales archaeon scgc2 ab-540-f20
28 c4ep5A_
not modelled
14.7
17
PDB header: hydrolaseChain: A: PDB Molecule: crossover junction endodeoxyribonuclease ruvc;
PDBTitle: thermus thermophilus ruvc structure
29 c3chxE_
not modelled
14.7
14
PDB header: membrane proteinChain: E: PDB Molecule: pmob;
PDBTitle: crystal structure of methylosinus trichosporium ob3b particulate2 methane monooxygenase (pmmo)
30 c1nafA_
not modelled
13.8
28
PDB header: signaling protein, membrane proteinChain: A: PDB Molecule: adp-ribosylation factor binding protein gga1;
PDBTitle: crystal structure of the human gga1 gat domain
31 c4l9dB_
not modelled
13.4
67
PDB header: cell adhesionChain: B: PDB Molecule: protease;
PDBTitle: crystal structure of the pkd1 domain from vibrio cholerae2 metalloprotease prtv
32 d1l0qa1
not modelled
13.3
83
Fold: Immunoglobulin-like beta-sandwichSuperfamily: PKD domainFamily: PKD domain
33 d1oxza_
not modelled
12.9
28
Fold: Spectrin repeat-likeSuperfamily: GAT-like domainFamily: GAT domain
34 c1oxzA_
not modelled
12.9
28
PDB header: membrane proteinChain: A: PDB Molecule: adp-ribosylation factor binding protein gga1;
PDBTitle: crystal structure of the human gga1 gat domain
35 c5ubdB_
not modelled
12.8
67
PDB header: dna binding proteinChain: B: PDB Molecule: rctb replication initiator protein;
PDBTitle: crystal structure of the n-terminal domain (domain 1) of rctb, rctb-1-2 124-l48m
36 d1c3ha_
not modelled
11.7
10
Fold: TNF-likeSuperfamily: TNF-likeFamily: TNF-like
37 c1avoA_
not modelled
11.6
54
PDB header: proteasome activatorChain: A: PDB Molecule: 11s regulator;
PDBTitle: proteasome activator reg(alpha)
38 c5hbaA_
not modelled
11.5
14
PDB header: immune systemChain: A: PDB Molecule: uncharacterized protein;
PDBTitle: globular domain of zebrafish complement 1qa protein
39 c5tvfF_
not modelled
11.4
29
PDB header: lyaseChain: F: PDB Molecule: s-adenosylmethionine decarboxylase proenzyme-like,
PDBTitle: crystal structure of trypanosoma brucei adometdc/prozyme heterodimer2 in complex with inhibitor cgp 40215
40 c4z9nB_
not modelled
11.3
12
PDB header: transport proteinChain: B: PDB Molecule: amino acid abc transporter, periplasmic amino acid-binding
PDBTitle: abc transporter / periplasmic binding protein from brucella ovis with2 glutathione bound
41 d1ttja_
not modelled
11.3
14
Fold: TIM beta/alpha-barrelSuperfamily: Triosephosphate isomerase (TIM)Family: Triosephosphate isomerase (TIM)
42 c3luuA_
not modelled
11.1
30
PDB header: biosynthetic proteinChain: A: PDB Molecule: uncharacterized protein;
PDBTitle: crystal structure of protein with unknown function which belongs to2 pfam duf971 family (afe_2189) from acidithiobacillus ferrooxidans3 atcc 23270 at 1.93 a resolution
43 d1oz9a_
not modelled
10.9
24
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Predicted metal-dependent hydrolase
44 c6aemB_
not modelled
10.6
67
PDB header: unknown functionChain: B: PDB Molecule: pkd domain;
PDBTitle: crystal structure of the pkd1 domain of vibrio anguillarum epp
45 c3nhnA_
not modelled
10.6
26
PDB header: transferaseChain: A: PDB Molecule: tyrosine-protein kinase hck;
PDBTitle: crystal structure of the src-family kinase hck sh3-sh2-linker2 regulatory region
46 c3oakD_
not modelled
10.6
100
PDB header: transcriptionChain: D: PDB Molecule: transcription elongation factor spt6;
PDBTitle: crystal structure of a spn1 (iws1)-spt6 complex
47 d1r2ra_
not modelled
10.6
14
Fold: TIM beta/alpha-barrelSuperfamily: Triosephosphate isomerase (TIM)Family: Triosephosphate isomerase (TIM)
48 d1pk6c_
not modelled
10.4
10
Fold: TNF-likeSuperfamily: TNF-likeFamily: TNF-like
49 c4ohqB_
not modelled
10.3
11
PDB header: isomeraseChain: B: PDB Molecule: triosephosphate isomerase, chloroplastic;
PDBTitle: crystal structure of chloroplast triose phosphate isomerase from2 arabidopsis thaliana
50 c3oakC_
not modelled
10.2
100
PDB header: transcriptionChain: C: PDB Molecule: transcription elongation factor spt6;
PDBTitle: crystal structure of a spn1 (iws1)-spt6 complex
51 c3gzrA_
not modelled
10.2
25
PDB header: unknown functionChain: A: PDB Molecule: uncharacterized protein with a ntf2-like fold;
PDBTitle: crystal structure of an uncharacterized protein with a cystatin-like2 fold (cc_2572) from caulobacter vibrioides at 1.40 a resolution
52 d1rgoa2
not modelled
10.0
33
Fold: CCCH zinc fingerSuperfamily: CCCH zinc fingerFamily: CCCH zinc finger
53 c4mknA_
not modelled
9.8
11
PDB header: isomeraseChain: A: PDB Molecule: triosephosphate isomerase;
PDBTitle: crystal structure of chloroplastic triosephosphate isomerase from2 chlamydomonas reinhardtii at 1.1 a of resolution
54 c5xywD_
not modelled
9.8
57
PDB header: protein bindingChain: D: PDB Molecule: gd21652;
PDBTitle: crystal structure of drosophila simulans rhino chromoshadow domain in2 complex with n-terminal domain
55 c4whnB_
not modelled
9.7
21
PDB header: transferaseChain: B: PDB Molecule: apxc;
PDBTitle: structure of toxin-activating acyltransferase (taat)
56 c2q3vB_
not modelled
9.5
24
PDB header: structural genomics, unknown functionChain: B: PDB Molecule: protein at2g34160;
PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at2g34160
57 c3m9yB_
not modelled
9.5
8
PDB header: isomeraseChain: B: PDB Molecule: triosephosphate isomerase;
PDBTitle: crystal structure of triosephosphate isomerase from methicillin2 resistant staphylococcus aureus at 1.9 angstrom resolution
58 c5kc5A_
not modelled
9.5
24
PDB header: signaling proteinChain: A: PDB Molecule: cerebellin-1;
PDBTitle: crystal structure of the cbln1 c1q domain trimer
59 d1mo0a_
not modelled
9.2
14
Fold: TIM beta/alpha-barrelSuperfamily: Triosephosphate isomerase (TIM)Family: Triosephosphate isomerase (TIM)
60 d1b9ba_
not modelled
9.1
14
Fold: TIM beta/alpha-barrelSuperfamily: Triosephosphate isomerase (TIM)Family: Triosephosphate isomerase (TIM)
61 c4y9aB_
not modelled
9.1
14
PDB header: isomeraseChain: B: PDB Molecule: triosephosphate isomerase;
PDBTitle: crystal structure of triosephosphate isomerase from streptomyces2 coelicolor
62 c4oumA_
not modelled
9.0
24
PDB header: signaling proteinChain: A: PDB Molecule: caprin-2;
PDBTitle: crystal structure of human caprin-2 c1q domain
63 d1suxa_
not modelled
9.0
14
Fold: TIM beta/alpha-barrelSuperfamily: Triosephosphate isomerase (TIM)Family: Triosephosphate isomerase (TIM)
64 c2wltA_
not modelled
9.0
19
PDB header: hydrolaseChain: A: PDB Molecule: l-asparaginase;
PDBTitle: the crystal structure of helicobacter pylori l-asparaginase at 1.4 a2 resolution
65 c2mc3A_
not modelled
8.5
17
PDB header: hydrolaseChain: A: PDB Molecule: mus81 endonuclease homolog (yeast), isoform cra_b;
PDBTitle: nmr solution structure of the winged-helix domain from mus812 structure-specific endonuclease
66 c4d7yA_
not modelled
8.4
10
PDB header: signaling proteinChain: A: PDB Molecule: c1q-related factor;
PDBTitle: crystal structure of mouse c1ql1 globular domain
67 d1sw3a_
not modelled
8.3
14
Fold: TIM beta/alpha-barrelSuperfamily: Triosephosphate isomerase (TIM)Family: Triosephosphate isomerase (TIM)
68 c2ka3C_
not modelled
8.3
19
PDB header: structural proteinChain: C: PDB Molecule: emilin-1;
PDBTitle: structure of emilin-1 c1q-like domain
69 c4i19A_
not modelled
8.2
26
PDB header: hydrolaseChain: A: PDB Molecule: epoxide hydrolase;
PDBTitle: the crystal structure of an epoxide hydrolase from streptomyces2 carzinostaticus subsp. neocarzinostaticus.
70 c4obtA_
not modelled
8.0
14
PDB header: isomeraseChain: A: PDB Molecule: triosephosphate isomerase, cytosolic;
PDBTitle: crystal structure of arabidopsis thaliana cytosolic triose phosphate2 isomerase
71 d1b5ea_
not modelled
7.9
12
Fold: Thymidylate synthase/dCMP hydroxymethylaseSuperfamily: Thymidylate synthase/dCMP hydroxymethylaseFamily: Thymidylate synthase/dCMP hydroxymethylase
72 d2p02a3
not modelled
7.9
20
Fold: S-adenosylmethionine synthetaseSuperfamily: S-adenosylmethionine synthetaseFamily: S-adenosylmethionine synthetase
73 d1n55a_
not modelled
7.8
14
Fold: TIM beta/alpha-barrelSuperfamily: Triosephosphate isomerase (TIM)Family: Triosephosphate isomerase (TIM)
74 d1qm4a3
not modelled
7.8
16
Fold: S-adenosylmethionine synthetaseSuperfamily: S-adenosylmethionine synthetaseFamily: S-adenosylmethionine synthetase
75 c5zg5B_
not modelled
7.8
11
PDB header: isomeraseChain: B: PDB Molecule: triosephosphate isomerase;
PDBTitle: crystal structure of triosephosphate isomerase sadsubaaa mutant from2 opisthorchis viverrini
76 c3j3bG_
not modelled
7.7
44
PDB header: ribosomeChain: G: PDB Molecule: 60s ribosomal protein l7a;
PDBTitle: structure of the human 60s ribosomal proteins
77 c2m3dA_
not modelled
7.7
10
PDB header: hydrolaseChain: A: PDB Molecule: nucleolar rna helicase 2;
PDBTitle: nmr structure of the guct domain from human dead box polypeptide 21
78 c3qstA_
not modelled
7.6
17
PDB header: isomeraseChain: A: PDB Molecule: triosephosphate isomerase, putative;
PDBTitle: crystal structure of trichomonas vaginalis triosephosphate isomerase2 tvag_096350 gene (val-45 variant)
79 d1m6ja_
not modelled
7.6
11
Fold: TIM beta/alpha-barrelSuperfamily: Triosephosphate isomerase (TIM)Family: Triosephosphate isomerase (TIM)
80 c4f3jA_
not modelled
7.6
9
PDB header: signaling proteinChain: A: PDB Molecule: complement c1q tumor necrosis factor-related protein 5;
PDBTitle: crystal structure of trimeric gc1q domain of human c1qtnf5 associated2 with late-onset retinal macular degeneration
81 d1fngb2
not modelled
7.5
33
Fold: MHC antigen-recognition domainSuperfamily: MHC antigen-recognition domainFamily: MHC antigen-recognition domain
82 d1kfia4
not modelled
7.5
25
Fold: TBP-likeSuperfamily: Phosphoglucomutase, C-terminal domainFamily: Phosphoglucomutase, C-terminal domain
83 d1pk6a_
not modelled
7.5
14
Fold: TNF-likeSuperfamily: TNF-likeFamily: TNF-like
84 c4ediC_
not modelled
7.5
16
PDB header: transport proteinChain: C: PDB Molecule: ethanolamine utilization protein;
PDBTitle: disulfide bonded eutl from clostridium perfringens
85 c4esjA_
not modelled
7.5
38
PDB header: hydrolase/dnaChain: A: PDB Molecule: type-2 restriction enzyme dpni;
PDBTitle: restriction endonuclease dpni in complex with target dna
86 d2btma_
not modelled
7.4
14
Fold: TIM beta/alpha-barrelSuperfamily: Triosephosphate isomerase (TIM)Family: Triosephosphate isomerase (TIM)
87 c4a1eF_
not modelled
7.4
39
PDB header: ribosomeChain: F: PDB Molecule: rpl7a;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna, 5.8s rrna3 and proteins of molecule 1
88 c2kzwA_
not modelled
7.4
83
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;
PDBTitle: solution nmr structure of q8psa4 from methanosarcina mazei, northeast2 structural genomics consortium target mar143a
89 c2q74B_
not modelled
7.4
24
PDB header: hydrolaseChain: B: PDB Molecule: inositol-1-monophosphatase;
PDBTitle: mycobacterium tuberculosis suhb
90 d1u5la_
not modelled
7.4
36
Fold: Prion-likeSuperfamily: Prion-likeFamily: Prion-like
91 c3x0uB_
not modelled
7.4
20
PDB header: toxinChain: B: PDB Molecule: uncharacterized protein;
PDBTitle: crystal structure of pirb
92 c2yt6A_
not modelled
7.4
19
PDB header: cell cycleChain: A: PDB Molecule: adult male urinary bladder cdna, riken full-
PDBTitle: solution structure of the sh3_1 domain of yamaguchi sarcoma2 viral (v-yes) oncogene homolog 1
93 d1mxaa3
not modelled
7.3
25
Fold: S-adenosylmethionine synthetaseSuperfamily: S-adenosylmethionine synthetaseFamily: S-adenosylmethionine synthetase
94 d1kv5a_
not modelled
7.3
14
Fold: TIM beta/alpha-barrelSuperfamily: Triosephosphate isomerase (TIM)Family: Triosephosphate isomerase (TIM)
95 d1q1va_
not modelled
7.2
24
Fold: Another 3-helical bundleSuperfamily: DEK C-terminal domainFamily: DEK C-terminal domain
96 c1l0qC_
not modelled
7.2
83
PDB header: protein bindingChain: C: PDB Molecule: surface layer protein;
PDBTitle: tandem yvtn beta-propeller and pkd domains from an archaeal surface2 layer protein
97 d1pk6b_
not modelled
7.2
14
Fold: TNF-likeSuperfamily: TNF-likeFamily: TNF-like
98 c2x3mA_
not modelled
7.1
19
PDB header: unknown functionChain: A: PDB Molecule: hypothetical protein orf239;
PDBTitle: crystal structure of hypothetical protein orf239 from pyrobaculum2 spherical virus
99 c1qeyD_
not modelled
7.1
19
PDB header: gene regulationChain: D: PDB Molecule: protein (regulatory protein mnt);
PDBTitle: nmr structure determination of the tetramerization domain2 of the mnt repressor: an asymmetric a-helical assembly in3 slow exchange