Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1139c_(-)_1266490_1266990
DateWed Jul 31 22:05:22 BST 2019
Unique Job IDf8c71828c767fe83
SequenceVYYLLILAVV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:42.309 Y:31.736 Z:62.243
Model (left) based on template c5v7pA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:protein-s-isoprenylcysteine o-methyltransferase;
PDBTitle: atomic structure of the eukaryotic intramembrane ras methyltransferase2 icmt (isoprenylcysteine carboxyl methyltransferase), in complex with3 a monobody
Confidence and coverage
Confidence:100.0% Coverage: 96%
160 residues ( 96% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5v7pA_



100.0 22
PDB header:transferase
Chain: A: PDB Molecule:protein-s-isoprenylcysteine o-methyltransferase;
PDBTitle: atomic structure of the eukaryotic intramembrane ras methyltransferase2 icmt (isoprenylcysteine carboxyl methyltransferase), in complex with3 a monobody
2c4a2nB_



99.9 18
PDB header:transferase
Chain: B: PDB Molecule:isoprenylcysteine carboxyl methyltransferase;
PDBTitle: crystal structure of ma-icmt
3c4quvB_



99.6 14
PDB header:oxidoreductase, membrane protein
Chain: B: PDB Molecule:delta(14)-sterol reductase;
PDBTitle: structure of an integral membrane delta(14)-sterol reductase
4d1s7ia_



33.2 17
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:DGPF domain (Pfam 04946)
5c1p58F_



28.3 31
PDB header:virus
Chain: F: PDB Molecule:envelope protein m;
PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction
6c1p58E_



27.3 19
PDB header:virus
Chain: E: PDB Molecule:envelope protein m;
PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction
7c3j2pD_



18.8 27
PDB header:viral protein
Chain: D: PDB Molecule:small envelope protein m;
PDBTitle: cryoem structure of dengue virus envelope protein heterotetramer
8c5wsnD_



14.8 29
PDB header:virus
Chain: D: PDB Molecule:m protein;
PDBTitle: structure of japanese encephalitis virus
9c5ht7A_



12.4 37
PDB header:metal binding protein
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a transition-metal-ion-binding betagamma-2 crystallin from methanosaeta thermophila
10c4b03D_



11.4 19
PDB header:virus
Chain: D: PDB Molecule:dengue virus 1 prm protein;
PDBTitle: 6a electron cryomicroscopy structure of immature dengue virus serotype2 1
11c4cbfB_



10.7 13
PDB header:virus
Chain: B: PDB Molecule:m protein;
PDBTitle: near-atomic resolution cryo-em structure of dengue serotype 4 virus
12c5ireD_



10.7 20
PDB header:virus
Chain: D: PDB Molecule:m protein;
PDBTitle: the cryo-em structure of zika virus
13c6epzA_



10.5 26
PDB header:transport protein
Chain: A: PDB Molecule:periplasmic alpha-galactoside-binding protein;
PDBTitle: structure of the periplasmic binding protein melb (atu4661) in complex2 with melibiose from agrobacterium fabrum c58
14d1e7la1



8.4 50
Fold:LEM/SAP HeH motif
Superfamily:Recombination endonuclease VII, C-terminal and dimerization domains
Family:Recombination endonuclease VII, C-terminal and dimerization domains
15c2wokA_



8.0 35
PDB header:peptide binding protein/peptide
Chain: A: PDB Molecule:clavulanic acid biosynthesis oligopeptide binding protein
PDBTitle: clavulanic acid biosynthesis oligopeptide binding protein 2 complexed2 with bradykinin
16c2kncA_



7.4 9
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
17d1rgoa2



7.0 67
Fold:CCCH zinc finger
Superfamily:CCCH zinc finger
Family:CCCH zinc finger
18d1hsta_



6.5 33
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Linker histone H1/H5
19c2rqpA_



6.3 23
PDB header:gene regulation
Chain: A: PDB Molecule:heterochromatin protein 1-binding protein 3;
PDBTitle: the solution structure of heterochromatin protein 1-binding2 protein 74 histone h1 like domain
20c4fajA_



6.3 15
PDB header:peptide binding protein
Chain: A: PDB Molecule:prgz;
PDBTitle: structure and mode of peptide binding of pheromone receptor prgz
21c2d5wA_



not modelled 5.8 39
PDB header:peptide binding protein
Chain: A: PDB Molecule:peptide abc transporter, peptide-binding protein;
PDBTitle: the crystal structure of oligopeptide binding protein from thermus2 thermophilus hb8 complexed with pentapeptide
22c3j00Z_



not modelled 5.5 15
PDB header:ribosome/ribosomal protein
Chain: Z: PDB Molecule:cell division protein ftsq;
PDBTitle: structure of the ribosome-secye complex in the membrane environment
23d1yqaa1



not modelled 5.5 8
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Linker histone H1/H5
24c2kb1A_



not modelled 5.3 12
PDB header:membrane protein
Chain: A: PDB Molecule:wsk3;
PDBTitle: nmr studies of a channel protein without membrane:2 structure and dynamics of water-solubilized kcsa
25c2xp1A_



not modelled 5.3 38
PDB header:transcription
Chain: A: PDB Molecule:spt6;
PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below