Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1140_(-)_1267352_1268200
DateWed Jul 31 22:05:22 BST 2019
Unique Job ID85737805d952de7e
SequenceMPRDYTAPRW ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:57.299 Y:41.304 Z:57.353
Model (left) based on template c4cadF_
Top template information
PDB header:protein binding
Chain: F: PDB Molecule:ras and a-factor converting enzyme 1, rce1;
PDBTitle: mechanism of farnesylated caax protein processing by the integral2 membrane protease rce1
Confidence and coverage
Confidence: 99.7% Coverage: 70%
196 residues ( 70% of your sequence) have been modelled with 99.7% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4cadF_



99.7 16
PDB header:protein binding
Chain: F: PDB Molecule:ras and a-factor converting enzyme 1, rce1;
PDBTitle: mechanism of farnesylated caax protein processing by the integral2 membrane protease rce1
2c4cadC_



99.7 14
PDB header:protein binding
Chain: C: PDB Molecule:ras and a-factor converting enzyme 1, rce1;
PDBTitle: mechanism of farnesylated caax protein processing by the integral2 membrane protease rce1
3c2mx4A_



30.3 50
PDB header:translation,protein binding
Chain: A: PDB Molecule:eukaryotic translation initiation factor 4e-binding protein
PDBTitle: nmr structure of phosphorylated 4e-bp2
4c4a1sE_



22.5 83
PDB header:cell cycle
Chain: E: PDB Molecule:re60102p;
PDBTitle: crystallographic structure of the pins:insc complex
5c2m0qA_



22.1 19
PDB header:membrane protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e member 2;
PDBTitle: solution nmr analysis of intact kcne2 in detergent micelles2 demonstrate a straight transmembrane helix
6c2l1nA_



18.3 38
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of the protein yp_399305.1
7c2jpwA_



14.7 86
PDB header:contractile protein
Chain: A: PDB Molecule:troponin i, cardiac muscle;
PDBTitle: solution structure of the bisphosphorylated cardiac2 specific n-extension of cardiac troponin i
8c4luqB_



13.4 50
PDB header:protein binding/toxin inhibitor
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of virulence effector tse3 in complex with2 neutralizer tsi3
9c2l35A_



12.6 14
PDB header:protein binding
Chain: A: PDB Molecule:dap12-nkg2c_tm;
PDBTitle: structure of the dap12-nkg2c transmembrane heterotrimer
10d2veaa2



11.3 32
Fold:Profilin-like
Superfamily:GAF domain-like
Family:Phytochrome-specific domain
11c3dh4A_



10.8 18
PDB header:transport protein
Chain: A: PDB Molecule:sodium/glucose cotransporter;
PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus
12c4huqS_



10.6 16
PDB header:hydrolase
Chain: S: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a transporter
13c6ht4A_



9.5 41
PDB header:unknown function
Chain: A: PDB Molecule:ns5a;
PDBTitle: nmr structure of ns5a-d2 (jfh1) peptide (304-323)
14c2k21A_



8.3 15
PDB header:membrane protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e
PDBTitle: nmr structure of human kcne1 in lmpg micelles at ph 6.0 and2 40 degree c
15c3tdsC_



8.1 16
PDB header:membrane protein
Chain: C: PDB Molecule:formate/nitrite transporter;
PDBTitle: crystal structure of hsc f194i
16d1cmca_



7.3 26
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:Met repressor, MetJ (MetR)
17c2xq2A_



7.2 17
PDB header:transport protein
Chain: A: PDB Molecule:sodium/glucose cotransporter;
PDBTitle: structure of the k294a mutant of vsglt
18d3c2wa2



7.1 38
Fold:Profilin-like
Superfamily:GAF domain-like
Family:Phytochrome-specific domain
19c2e6xD_



6.8 33
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein ttha1281;
PDBTitle: x-ray structure of tt1592 from thermus thermophilus hb8
20c5zvtM_



6.7 13
PDB header:virus
Chain: M: PDB Molecule:n-terminus of outer capsid protein vp5;
PDBTitle: structure of rna polymerase complex and genome within a dsrna virus2 provides insights into the mechanisms of transcription and assembly
21c2ndjA_



not modelled 6.3 19
PDB header:membrane protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e member 3;
PDBTitle: structural basis for kcne3 and estrogen modulation of the kcnq12 channel
22c6hqeq_



not modelled 6.3 43
PDB header:protein fibril
Chain: Q: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
23c6hqep_



not modelled 6.3 43
PDB header:protein fibril
Chain: P: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
24c6hqeT_



not modelled 6.3 43
PDB header:protein fibril
Chain: T: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
25c6hqej_



not modelled 6.3 43
PDB header:protein fibril
Chain: J: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
26c6hqeB_



not modelled 6.3 43
PDB header:protein fibril
Chain: B: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
27c6hqeu_



not modelled 6.3 43
PDB header:protein fibril
Chain: U: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
28c6hqeP_



not modelled 6.3 43
PDB header:protein fibril
Chain: P: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
29c6hqeh_



not modelled 6.3 43
PDB header:protein fibril
Chain: H: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
30c6hqeg_



not modelled 6.3 43
PDB header:protein fibril
Chain: G: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
31c6hqed_



not modelled 6.3 43
PDB header:protein fibril
Chain: D: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
32c6hqex_



not modelled 6.3 43
PDB header:protein fibril
Chain: X: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
33c6hqeQ_



not modelled 6.3 43
PDB header:protein fibril
Chain: Q: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
34c6hqen_



not modelled 6.3 43
PDB header:protein fibril
Chain: N: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
35c6hqeE_



not modelled 6.3 43
PDB header:protein fibril
Chain: E: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
36c6hqeZ_



not modelled 6.3 43
PDB header:protein fibril
Chain: Z: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
37c6hqeL_



not modelled 6.3 43
PDB header:protein fibril
Chain: L: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
38c6hqeX_



not modelled 6.3 43
PDB header:protein fibril
Chain: X: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
39c6hqeH_



not modelled 6.3 43
PDB header:protein fibril
Chain: H: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
40c6hqes_



not modelled 6.3 43
PDB header:protein fibril
Chain: S: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
41c6hqek_



not modelled 6.3 43
PDB header:protein fibril
Chain: K: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
42c6hqeO_



not modelled 6.3 43
PDB header:protein fibril
Chain: O: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
43c6hqer_



not modelled 6.3 43
PDB header:protein fibril
Chain: R: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
44c6hqea_



not modelled 6.3 43
PDB header:protein fibril
Chain: A: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
45c6hqeb_



not modelled 6.3 43
PDB header:protein fibril
Chain: B: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
46c6hqeR_



not modelled 6.3 43
PDB header:protein fibril
Chain: R: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
47c6hqei_



not modelled 6.3 43
PDB header:protein fibril
Chain: I: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
48c6hqeJ_



not modelled 6.3 43
PDB header:protein fibril
Chain: J: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
49c6hqeM_



not modelled 6.3 43
PDB header:protein fibril
Chain: M: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
50c6hqew_



not modelled 6.3 43
PDB header:protein fibril
Chain: W: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
51c6hqeU_



not modelled 6.3 43
PDB header:protein fibril
Chain: U: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
52c6hqeY_



not modelled 6.3 43
PDB header:protein fibril
Chain: Y: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
53c6hqeo_



not modelled 6.3 43
PDB header:protein fibril
Chain: O: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
54c6hqez_



not modelled 6.3 43
PDB header:protein fibril
Chain: Z: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
55c6hqeG_



not modelled 6.3 43
PDB header:protein fibril
Chain: G: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
56c6hqev_



not modelled 6.3 43
PDB header:protein fibril
Chain: V: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
57c6hqeI_



not modelled 6.3 43
PDB header:protein fibril
Chain: I: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
58c6hqeC_



not modelled 6.3 43
PDB header:protein fibril
Chain: C: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
59c6hqeN_



not modelled 6.3 43
PDB header:protein fibril
Chain: N: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
60c6hqeF_



not modelled 6.3 43
PDB header:protein fibril
Chain: F: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
61c6hqeA_



not modelled 6.3 43
PDB header:protein fibril
Chain: A: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
62c6hqeD_



not modelled 6.3 43
PDB header:protein fibril
Chain: D: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
63c6hqeK_



not modelled 6.3 43
PDB header:protein fibril
Chain: K: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
64c6hqey_



not modelled 6.3 43
PDB header:protein fibril
Chain: Y: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
65c6hqem_



not modelled 6.3 43
PDB header:protein fibril
Chain: M: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
66c6hqeS_



not modelled 6.3 43
PDB header:protein fibril
Chain: S: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
67c6hqec_



not modelled 6.3 43
PDB header:protein fibril
Chain: C: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
68c6hqeV_



not modelled 6.3 43
PDB header:protein fibril
Chain: V: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
69c6hqee_



not modelled 6.3 43
PDB header:protein fibril
Chain: E: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
70c6hqet_



not modelled 6.3 43
PDB header:protein fibril
Chain: T: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
71c6hqel_



not modelled 6.3 43
PDB header:protein fibril
Chain: L: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
72c6hqeW_



not modelled 6.3 43
PDB header:protein fibril
Chain: W: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
73c6hqef_



not modelled 6.3 43
PDB header:protein fibril
Chain: F: PDB Molecule:peptide lrv_m3delta1;
PDBTitle: cryo-em of self-assembly peptide filament lrv_m3delta1
74c4b1vM_



not modelled 6.3 56
PDB header:structural protein
Chain: M: PDB Molecule:phosphatase and actin regulator 1;
PDBTitle: structure of the phactr1 rpel-n domain bound to g-actin
75c4b1vN_



not modelled 6.3 56
PDB header:structural protein
Chain: N: PDB Molecule:phosphatase and actin regulator 1;
PDBTitle: structure of the phactr1 rpel-n domain bound to g-actin
76c4z7fD_



not modelled 6.2 9
PDB header:transport protein
Chain: D: PDB Molecule:folate ecf transporter;
PDBTitle: crystal structure of folt bound with folic acid
77c5d7tC_



not modelled 6.2 10
PDB header:transport protein
Chain: C: PDB Molecule:s-component for folate;
PDBTitle: folate ecf transporter: apo state
78c3g1jA_



not modelled 6.1 29
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:integron cassette protein;
PDBTitle: structure from the mobile metagenome of vibrio cholerae.2 integron cassette protein vch_cass4.
79c3shpA_



not modelled 6.0 33
PDB header:transferase
Chain: A: PDB Molecule:putative acetyltransferase sthe_0691;
PDBTitle: crystal structure of putative acetyltransferase from sphaerobacter2 thermophilus dsm 20745
80c4b1uM_



not modelled 5.9 56
PDB header:structural protein
Chain: M: PDB Molecule:phosphatase and actin regulator 1;
PDBTitle: structure of the phactr1 rpel domain and rpel motif directed2 assemblies with g-actin reveal the molecular basis for actin binding3 cooperativity.
81c3o0rC_



not modelled 5.9 12
PDB header:immune system/oxidoreductase
Chain: C: PDB Molecule:nitric oxide reductase subunit c;
PDBTitle: crystal structure of nitric oxide reductase from pseudomonas2 aeruginosa in complex with antibody fragment
82c2l9uB_



not modelled 5.6 21
PDB header:membrane protein
Chain: B: PDB Molecule:receptor tyrosine-protein kinase erbb-3;
PDBTitle: spatial structure of dimeric erbb3 transmembrane domain
83c2l9uA_



not modelled 5.6 21
PDB header:membrane protein
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3;
PDBTitle: spatial structure of dimeric erbb3 transmembrane domain
84c3jqoF_



not modelled 5.6 45
PDB header:transport protein
Chain: F: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
85c3jqom_



not modelled 5.6 45
PDB header:transport protein
Chain: M: PDB Molecule:traf protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
86c3jqog_



not modelled 5.6 45
PDB header:transport protein
Chain: G: PDB Molecule:traf protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
87c3jqoj_



not modelled 5.6 45
PDB header:transport protein
Chain: J: PDB Molecule:traf protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
88c3jqoI_



not modelled 5.6 45
PDB header:transport protein
Chain: I: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
89c3jqoR_



not modelled 5.6 45
PDB header:transport protein
Chain: R: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
90c3jqoX_



not modelled 5.6 45
PDB header:transport protein
Chain: X: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
91c3jqoO_



not modelled 5.6 45
PDB header:transport protein
Chain: O: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
92c3jqoa_



not modelled 5.6 45
PDB header:transport protein
Chain: A: PDB Molecule:traf protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
93c3jqod_



not modelled 5.6 45
PDB header:transport protein
Chain: D: PDB Molecule:traf protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
94c2ofqB_



not modelled 5.6 45
PDB header:protein transport/protein transport
Chain: B: PDB Molecule:tran;
PDBTitle: nmr solution structure of a complex between the virb9/virb72 interaction domains of the pkm101 type iv secretion system
95c3jqoC_



not modelled 5.6 45
PDB header:transport protein
Chain: C: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
96c3jqop_



not modelled 5.5 45
PDB header:transport protein
Chain: P: PDB Molecule:traf protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
97d1vlpa1



not modelled 5.5 25
Fold:alpha/beta-Hammerhead
Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like
Family:Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like
98c3jqoU_



not modelled 5.4 45
PDB header:transport protein
Chain: U: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
99c4k0dB_



not modelled 5.4 58
PDB header:signaling protein
Chain: B: PDB Molecule:periplasmic sensor hybrid histidine kinase;
PDBTitle: periplasmic sensor domain of sensor histidine kinase, adeh_2942

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below