Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1146_(mmpL13b)_1273360_1274772
DateWed Jul 31 22:05:23 BST 2019
Unique Job IDe000192fa0e67bdb
SequenceVATVAFVATA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:61.290 Y:70.188 Z:105.902
Model (left) based on template c6ajjA_
Top template information
PDB header:membrane protein, hydrolase
Chain: A: PDB Molecule:drug exporters of the rnd superfamily-like protein,
PDBTitle: crystal structure of mycolic acid transporter mmpl3 from mycobacterium2 smegmatis complexed with ica38
Confidence and coverage
Confidence:100.0% Coverage: 87%
411 residues ( 87% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6ajjA_



100.0 31
PDB header:membrane protein, hydrolase
Chain: A: PDB Molecule:drug exporters of the rnd superfamily-like protein,
PDBTitle: crystal structure of mycolic acid transporter mmpl3 from mycobacterium2 smegmatis complexed with ica38
2c5khnB_



100.0 15
PDB header:membrane protein
Chain: B: PDB Molecule:rnd transporter;
PDBTitle: crystal structures of the burkholderia multivorans hopanoid2 transporter hpnn
3c6dmoA_



100.0 16
PDB header:protein binding
Chain: A: PDB Molecule:protein patched homolog 1;
PDBTitle: cryo-em structure of human ptch1 with three mutations2 l282q/t500f/p504l
4c5lq3F_



100.0 15
PDB header:transport protein
Chain: F: PDB Molecule:cmeb;
PDBTitle: structures and transport dynamics of the campylobacter jejuni2 multidrug efflux pump cmeb
5c3aqpB_



100.0 14
PDB header:membrane protein
Chain: B: PDB Molecule:probable secdf protein-export membrane protein;
PDBTitle: crystal structure of secdf, a translocon-associated membrane protein,2 from thermus thrmophilus
6c6owsB_



100.0 17
PDB header:membrane protein
Chain: B: PDB Molecule:efflux pump membrane transporter;
PDBTitle: cryo-em structure of an acinetobacter baumannii multidrug efflux pump
7c3jd8A_



100.0 14
PDB header:membrane protein
Chain: A: PDB Molecule:niemann-pick c1 protein;
PDBTitle: cryo-em structure of the full-length human npc1 at 4.4 angstrom
8c3k07A_



100.0 19
PDB header:transport protein
Chain: A: PDB Molecule:cation efflux system protein cusa;
PDBTitle: crystal structure of cusa
9c4mt1A_



100.0 20
PDB header:membrane protein, tranport protein
Chain: A: PDB Molecule:drug efflux protein;
PDBTitle: crystal structure of the neisseria gonorrhoeae mtrd inner membrane2 multidrug efflux pump
10c5xamA_



100.0 15
PDB header:membrane protein
Chain: A: PDB Molecule:protein translocase subunit secd;
PDBTitle: crystal structure of secdf in i form at 4 a resolution
11c2v50A_



100.0 17
PDB header:membrane protein
Chain: A: PDB Molecule:multidrug resistance protein mexb;
PDBTitle: the missing part of the bacterial mexab-oprm system: structural2 determination of the multidrug exporter mexb
12c1oy8A_



100.0 19
PDB header:membrane protein
Chain: A: PDB Molecule:acriflavine resistance protein b;
PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump
13c4k0eA_



100.0 21
PDB header:transport protein
Chain: A: PDB Molecule:heavy metal cation tricomponent efflux pump znea(czca-
PDBTitle: x-ray crystal structure of a heavy metal efflux pump, crystal form ii
14c6csxA_



100.0 17
PDB header:transport protein
Chain: A: PDB Molecule:multidrug efflux pump subunit acrb;
PDBTitle: single particles cryo-em structure of acrb d407a associated with lipid2 bilayer at 3.0 angstrom
15c4k0eC_



100.0 21
PDB header:transport protein
Chain: C: PDB Molecule:heavy metal cation tricomponent efflux pump znea(czca-
PDBTitle: x-ray crystal structure of a heavy metal efflux pump, crystal form ii
16c5mg3F_



99.9 17
PDB header:chaperone
Chain: F: PDB Molecule:protein translocase subunit secf;
PDBTitle: em fitted model of bacterial holo-translocon
17d1iwga8



99.9 16
Fold:Multidrug efflux transporter AcrB transmembrane domain
Superfamily:Multidrug efflux transporter AcrB transmembrane domain
Family:Multidrug efflux transporter AcrB transmembrane domain
18d1iwga7



99.9 18
Fold:Multidrug efflux transporter AcrB transmembrane domain
Superfamily:Multidrug efflux transporter AcrB transmembrane domain
Family:Multidrug efflux transporter AcrB transmembrane domain
19c5mg3D_



99.9 13
PDB header:chaperone
Chain: D: PDB Molecule:protein translocase subunit secd;
PDBTitle: em fitted model of bacterial holo-translocon
20d1t4za_



48.5 38
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:KaiB-like
21c5m87A_



not modelled 35.7 17
PDB header:transport protein
Chain: A: PDB Molecule:divalent metal cation transporter mnth;
PDBTitle: crystal structure of eremococcus coleocola manganese transporter
22c5t42A_



not modelled 34.6 33
PDB header:viral protein
Chain: A: PDB Molecule:envelope glycoprotein;
PDBTitle: structure of the ebola virus envelope protein mper/tm domain and its2 interaction with the fusion loop explains their fusion activity
23c5t6oA_



not modelled 34.1 22
PDB header:biosynthetic protein
Chain: A: PDB Molecule:poly-beta-hydroxybuterate polymerase;
PDBTitle: structure of the catalytic domain of the class i polyhydroxybutyrate2 synthase from cupriavidus necator
24c5xavB_



not modelled 33.9 19
PDB header:biosynthetic protein
Chain: B: PDB Molecule:intracellular polyhydroxyalkanoate synthase;
PDBTitle: structure of phac from chromobacterium sp. usm2
25c2na9A_



not modelled 33.6 20
PDB header:signaling protein
Chain: A: PDB Molecule:cytokine receptor common subunit beta;
PDBTitle: transmembrane structure of the p441a mutant of the cytokine receptor2 common subunit beta
26c2na8A_



not modelled 33.2 20
PDB header:membrane protein
Chain: A: PDB Molecule:cytokine receptor common subunit beta;
PDBTitle: transmembrane structure of the cytokine receptor common subunit beta
27c6gctA_



not modelled 30.2 16
PDB header:membrane protein
Chain: A: PDB Molecule:neutral amino acid transporter b(0);
PDBTitle: cryo-em structure of the human neutral amino acid transporter asct2
28c3lrcC_



not modelled 25.1 13
PDB header:transport protein
Chain: C: PDB Molecule:arginine/agmatine antiporter;
PDBTitle: structure of e. coli adic (p1)
29c5oonA_



not modelled 13.1 6
PDB header:membrane protein
Chain: A: PDB Molecule:undecaprenyl-diphosphatase;
PDBTitle: structure of undecaprenyl-pyrophosphate phosphatase, baca
30c3ut7A_



not modelled 13.1 14
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: structural view of a non pfam singleton and crystal packing analysis
31c6b2zf_



not modelled 12.6 41
PDB header:membrane protein
Chain: F: PDB Molecule:atp synthase subunit c, mitochondrial;
PDBTitle: cryo-em structure of the dimeric fo region of yeast mitochondrial atp2 synthase
32c4ev6E_



not modelled 12.5 15
PDB header:metal transport
Chain: E: PDB Molecule:magnesium transport protein cora;
PDBTitle: the complete structure of cora magnesium transporter from2 methanocaldococcus jannaschii
33d2hkua2



not modelled 12.2 17
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
34c6b8ht_



not modelled 12.0 41
PDB header:membrane protein
Chain: T: PDB Molecule:atp synthase subunit 9, mitochondrial;
PDBTitle: mosaic model of yeast mitochondrial atp synthase monomer
35c6hwhb_



not modelled 11.2 17
PDB header:electron transport
Chain: B: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
36c5b16C_



not modelled 10.3 14
PDB header:hydrolase
Chain: C: PDB Molecule:microprocessor complex subunit dgcr8;
PDBTitle: x-ray structure of drosha in complex with the c-terminal tail of2 dgcr8.
37c5b16B_



not modelled 9.9 14
PDB header:hydrolase
Chain: B: PDB Molecule:microprocessor complex subunit dgcr8;
PDBTitle: x-ray structure of drosha in complex with the c-terminal tail of2 dgcr8.
38c5xu1M_



not modelled 9.6 14
PDB header:transport protein
Chain: M: PDB Molecule:abc transporter permeae;
PDBTitle: structure of a non-canonical abc transporter from streptococcus2 pneumoniae r6
39c4n8oA_



not modelled 9.5 17
PDB header:membrane protein
Chain: A: PDB Molecule:cell division protein ftsx;
PDBTitle: crystal structure of mycobacterial ftsx extracellular domain, bromide2 derivative
40c6iu3A_



not modelled 9.3 16
PDB header:metal transport
Chain: A: PDB Molecule:vit1;
PDBTitle: crystal structure of iron transporter vit1 with zinc ions
41c5gasN_



not modelled 9.3 15
PDB header:hydrolase
Chain: N: PDB Molecule:archaeal/vacuolar-type h+-atpase subunit i;
PDBTitle: thermus thermophilus v/a-atpase, conformation 2
42c3j20P_



not modelled 9.1 9
PDB header:ribosome
Chain: P: PDB Molecule:30s ribosomal protein s14p type z;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
43c6mk7A_



not modelled 8.8 20
PDB header:membrane protein
Chain: A: PDB Molecule:cell division protein ftsx;
PDBTitle: solution structure of the large extracellular loop of ftsx in2 streptococcus pneumoniae
44c6m97A_



not modelled 8.8 21
PDB header:transport protein
Chain: A: PDB Molecule:chimera protein of high affinity copper uptake protein 1
PDBTitle: crystal structure of the high-affinity copper transporter ctr1
45c5n9yB_



not modelled 8.7 7
PDB header:membrane protein
Chain: B: PDB Molecule:zinc transport protein zntb;
PDBTitle: the full-length structure of zntb
46c5vwxB_



not modelled 8.2 15
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: bak core latch dimer in complex with bim-h0-h3glt
47c5vwxD_



not modelled 8.2 15
PDB header:apoptosis
Chain: D: PDB Molecule:bcl-2-like protein 11;
PDBTitle: bak core latch dimer in complex with bim-h0-h3glt
48c5lm4A_



not modelled 8.0 16
PDB header:transport protein
Chain: A: PDB Molecule:excitatory amino acid transporter 1,neutral amino acid
PDBTitle: structure of the thermostalilized eaat1 cryst-ii mutant in complex2 with l-asp and the allosteric inhibitor ucph101
49c1p58E_



not modelled 8.0 13
PDB header:virus
Chain: E: PDB Molecule:envelope protein m;
PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction
50c1p58F_



not modelled 8.0 13
PDB header:virus
Chain: F: PDB Molecule:envelope protein m;
PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction
51c2n7rA_



not modelled 7.7 23
PDB header:membrane protein
Chain: A: PDB Molecule:nicastrin;
PDBTitle: structure of the transmembrane domain of human nicastrin in dpc2 micelles
52c1yewF_



not modelled 7.3 16
PDB header:oxidoreductase, membrane protein
Chain: F: PDB Molecule:particulate methane monooxygenase, a subunit;
PDBTitle: crystal structure of particulate methane monooxygenase
53c3c4rC_



not modelled 7.2 21
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized protein encoded by2 cryptic prophage
54c2yvxD_



not modelled 7.1 14
PDB header:transport protein
Chain: D: PDB Molecule:mg2+ transporter mgte;
PDBTitle: crystal structure of magnesium transporter mgte
55c3ilaG_



not modelled 6.9 30
PDB header:signaling protein
Chain: G: PDB Molecule:ryanodine receptor 1;
PDBTitle: crystal structure of rabbit ryanodine receptor 1 n-terminal domain (9-2 205)
56c5y9vA_



not modelled 6.7 33
PDB header:transport protein
Chain: A: PDB Molecule:ryanodine receptor 1;
PDBTitle: crystal sturcture of diamondback moth ryanodine receptor n-terminal2 domain
57c4gn0D_



not modelled 6.6 15
PDB header:signaling protein
Chain: D: PDB Molecule:hamp domain of af1503;
PDBTitle: de novo phasing of a hamp-complex using an improved arcimboldo method
58c3j2pD_



not modelled 6.5 8
PDB header:viral protein
Chain: D: PDB Molecule:small envelope protein m;
PDBTitle: cryoem structure of dengue virus envelope protein heterotetramer
59c1wyoA_



not modelled 6.4 7
PDB header:structural protein
Chain: A: PDB Molecule:microtubule-associated protein rp/eb family
PDBTitle: solution structure of the ch domain of human microtubule-2 associated protein rp/eb family member 3
60c4hkrA_



not modelled 6.1 21
PDB header:transport protein
Chain: A: PDB Molecule:calcium release-activated calcium channel protein 1;
PDBTitle: calcium release-activated calcium (crac) channel orai
61c1agqB_



not modelled 6.0 0
PDB header:growth factor
Chain: B: PDB Molecule:glial cell-derived neurotrophic factor;
PDBTitle: glial cell-derived neurotrophic factor from rat
62c5j8vD_



not modelled 6.0 27
PDB header:transport protein
Chain: D: PDB Molecule:ryanodine receptor 1;
PDBTitle: structure of rabbit ryanodine receptor ryr1 open state activated by2 calcium ion
63c5n2sA_



not modelled 5.9 10
PDB header:membrane protein
Chain: A: PDB Molecule:soluble cytochrome b562,adenosine receptor a1;
PDBTitle: crystal structure of stabilized a1 receptor in complex with psb36 at2 3.3a resolution
64c4hkrB_



not modelled 5.9 21
PDB header:transport protein
Chain: B: PDB Molecule:calcium release-activated calcium channel protein 1;
PDBTitle: calcium release-activated calcium (crac) channel orai
65c5wsnD_



not modelled 5.9 8
PDB header:virus
Chain: D: PDB Molecule:m protein;
PDBTitle: structure of japanese encephalitis virus
66c5o5oD_



not modelled 5.9 11
PDB header:chaperone
Chain: D: PDB Molecule:rnase adapter protein rapz;
PDBTitle: x-ray crystal structure of rapz from escherichia coli (p32 space2 group)
67c4l4iA_



not modelled 5.8 29
PDB header:metal transport
Chain: A: PDB Molecule:ryanodine receptor 2;
PDBTitle: crystal structure of mouse ryanodine receptor isoform 2 (ryr2) 1-5472 disease mutant r420q
68c6mq2D_



not modelled 5.8 27
PDB header:de novo protein
Chain: D: PDB Molecule:mini-evgl membrane protein;
PDBTitle: de novo design of membrane protein--mini-evgl membrane protein, c22212 form-2
69c6mctG_



not modelled 5.8 27
PDB header:de novo protein
Chain: G: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
70c6mctL_



not modelled 5.8 27
PDB header:de novo protein
Chain: L: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
71c6mctE_



not modelled 5.8 27
PDB header:de novo protein
Chain: E: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
72c6mctJ_



not modelled 5.8 27
PDB header:de novo protein
Chain: J: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
73c6mpwA_



not modelled 5.8 27
PDB header:de novo protein
Chain: A: PDB Molecule:mini-evgl membrane protein;
PDBTitle: de novo design of membrane protein--mini-evgl membrane protein, c22212 form-1
74c6mctB_



not modelled 5.8 27
PDB header:de novo protein
Chain: B: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
75c6mctI_



not modelled 5.8 27
PDB header:de novo protein
Chain: I: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
76c6mctA_



not modelled 5.8 27
PDB header:de novo protein
Chain: A: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
77c6mctK_



not modelled 5.8 27
PDB header:de novo protein
Chain: K: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
78c6mctH_



not modelled 5.8 27
PDB header:de novo protein
Chain: H: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
79c6mctF_



not modelled 5.8 27
PDB header:de novo protein
Chain: F: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
80c6mctN_



not modelled 5.8 27
PDB header:de novo protein
Chain: N: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
81c6mctD_



not modelled 5.8 27
PDB header:de novo protein
Chain: D: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
82c6mctM_



not modelled 5.8 27
PDB header:de novo protein
Chain: M: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
83c6mctC_



not modelled 5.8 27
PDB header:de novo protein
Chain: C: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
84c6mctO_



not modelled 5.8 27
PDB header:de novo protein
Chain: O: PDB Molecule:mini-evgl membrane protein;
PDBTitle: a designed pentameric membrane protein stabilized by van der waals2 interaction
85c5v2sA_



not modelled 5.8 18
PDB header:viral protein
Chain: A: PDB Molecule:envelope glycoprotein b;
PDBTitle: crystal structure of glycoprotein b from herpes simplex virus type i
86c2oceA_



not modelled 5.8 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pa5201;
PDBTitle: crystal structure of tex family protein pa5201 from2 pseudomonas aeruginosa
87c6mq2B_



not modelled 5.7 27
PDB header:de novo protein
Chain: B: PDB Molecule:mini-evgl membrane protein;
PDBTitle: de novo design of membrane protein--mini-evgl membrane protein, c22212 form-2
88c6mpwC_



not modelled 5.7 27
PDB header:de novo protein
Chain: C: PDB Molecule:mini-evgl membrane protein;
PDBTitle: de novo design of membrane protein--mini-evgl membrane protein, c22212 form-1
89c6mpwD_



not modelled 5.7 27
PDB header:de novo protein
Chain: D: PDB Molecule:mini-evgl membrane protein;
PDBTitle: de novo design of membrane protein--mini-evgl membrane protein, c22212 form-1
90c6mq2E_



not modelled 5.7 27
PDB header:de novo protein
Chain: E: PDB Molecule:mini-evgl membrane protein;
PDBTitle: de novo design of membrane protein--mini-evgl membrane protein, c22212 form-2
91c6mq2A_



not modelled 5.7 27
PDB header:de novo protein
Chain: A: PDB Molecule:mini-evgl membrane protein;
PDBTitle: de novo design of membrane protein--mini-evgl membrane protein, c22212 form-2
92c6mq2C_



not modelled 5.7 27
PDB header:de novo protein
Chain: C: PDB Molecule:mini-evgl membrane protein;
PDBTitle: de novo design of membrane protein--mini-evgl membrane protein, c22212 form-2
93c6mpwB_



not modelled 5.7 27
PDB header:de novo protein
Chain: B: PDB Molecule:mini-evgl membrane protein;
PDBTitle: de novo design of membrane protein--mini-evgl membrane protein, c22212 form-1
94c6mpwE_



not modelled 5.7 27
PDB header:de novo protein
Chain: E: PDB Molecule:mini-evgl membrane protein;
PDBTitle: de novo design of membrane protein--mini-evgl membrane protein, c22212 form-1
95c3chxF_



not modelled 5.6 19
PDB header:membrane protein
Chain: F: PDB Molecule:pmoa;
PDBTitle: crystal structure of methylosinus trichosporium ob3b particulate2 methane monooxygenase (pmmo)
96c6bm8A_



not modelled 5.5 15
PDB header:viral protein
Chain: A: PDB Molecule:envelope glycoprotein b;
PDBTitle: crystal structure of glycoprotein b from herpes simplex virus type i
97c5ireD_



not modelled 5.5 8
PDB header:virus
Chain: D: PDB Molecule:m protein;
PDBTitle: the cryo-em structure of zika virus
98d3bzka3



not modelled 5.5 23
Fold:Tex N-terminal region-like
Superfamily:Tex N-terminal region-like
Family:Tex N-terminal region-like
99d1jb0m_



not modelled 5.3 25
Fold:Single transmembrane helix
Superfamily:Subunit XII of photosystem I reaction centre, PsaM
Family:Subunit XII of photosystem I reaction centre, PsaM

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below