1 c2qgpA_ 
 
99.0 
18 
PDB header: hydrolaseChain:  A: PDB Molecule: hnh endonuclease;PDBTitle:  x-ray structure of the nhn endonuclease from geobacter2 metallireducens. northeast structural genomics consortium target3 gmr87.
2 c6ghcA_ 
 
98.8 
21 
PDB header: hydrolaseChain:  A: PDB Molecule: 5-methylcytosine-specific restriction enzyme a;PDBTitle:  modification dependent ecokmcra restriction endonuclease
3 c5mkwA_ 
 
98.6 
13 
PDB header: hydrolaseChain:  A: PDB Molecule: dna annealing helicase and endonuclease zranb3;PDBTitle:  crystal structure of the human zranb3 hnh domain
4 c5x1hS_ 
 
98.6 
15 
PDB header: protein transportChain:  S: PDB Molecule: icmj (dotn);PDBTitle:  structure of legionella pneumophila dotn
5 c5h0mA_ 
 
97.9 
23 
PDB header: hydrolaseChain:  A: PDB Molecule: hnh endonuclease;PDBTitle:  crystal structure of deep-sea thermophilic bacteriophage gve2 hnh2 endonuclease with zinc ion
6 c5vgbA_ 
 
97.8 
23 
PDB header: hydrolase/hydrolase inhibitorChain:  A: PDB Molecule: crispr-associated endonuclease cas9;PDBTitle:  crystal structure of nmecas9 hnh domain bound to anti-crispr acriic1
7 c5zmmD_ 
 
97.6 
20 
PDB header: dna binding proteinChain:  D: PDB Molecule: uncharacterized protein mcra;PDBTitle:  structure of the type iv phosphorothioation-dependent restriction2 endonuclease scomcra
8 c4ogeA_ 
 
96.9 
17 
PDB header: hydrolaseChain:  A: PDB Molecule: hnh endonuclease domain protein;PDBTitle:  crystal structure of the type ii-c cas9 enzyme from actinomyces2 naeslundii
9 c5axwA_ 
 
96.2 
11 
PDB header: hydrolase/rna/dnaChain:  A: PDB Molecule: crispr-associated endonuclease cas9;PDBTitle:  crystal structure of staphylococcus aureus cas9 in complex with sgrna2 and target dna (ttgggt pam)
10 c6ghsA_ 
 
94.7 
11 
PDB header: hydrolaseChain:  A: PDB Molecule: tagi restriction endonuclease;PDBTitle:  modification dependent tagi restriction endonuclease
11 d2gykb1 
 
88.5 
18 
Fold: His-Me finger endonucleasesSuperfamily: His-Me finger endonucleasesFamily: HNH-motif
12 c4cmqB_ 
 
80.5 
22 
PDB header: hydrolaseChain:  B: PDB Molecule: crispr-associated endonuclease cas9/csn1;PDBTitle:  crystal structure of mn-bound s.pyogenes cas9
13 c3mkyP_ 
 
80.4 
23 
PDB header: dna binding protein/dnaChain:  P: PDB Molecule: protein sopb;PDBTitle:  structure of sopb(155-323)-18mer dna complex, i23 form
14 d2jb0b1 
 
79.7 
19 
Fold: His-Me finger endonucleasesSuperfamily: His-Me finger endonucleasesFamily: HNH-motif
15 d1vz0a1 
 
75.2 
20 
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: KorB DNA-binding domain-likeFamily: KorB DNA-binding domain-like
16 c3mkzU_ 
 
72.3 
22 
PDB header: dna-binding protein/dnaChain:  U: PDB Molecule: protein sopb;PDBTitle:  structure of sopb(155-272)-18mer complex, p21 form
17 c3plwA_ 
 
54.2 
18 
PDB header: hydrolaseChain:  A: PDB Molecule: recombination enhancement function protein;PDBTitle:  ref protein from p1 bacteriophage
18 c5ew5C_ 
 
49.0 
16 
PDB header: hydrolaseChain:  C: PDB Molecule: colicin-e9;PDBTitle:  crystal structure of colicin e9 in complex with its immunity protein2 im9
19 c4qkoH_ 
 
44.9 
16 
PDB header: antimicrobial proteinChain:  H: PDB Molecule: pyocin-s2;PDBTitle:  the crystal structure of the pyocin s2 nuclease domain, immunity2 protein complex at 1.8 angstroms
20 d2dlka1 
 
40.6 
50 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
21 c7ceiB_ 
 
not modelled 
39.7 
16 
PDB header: immune systemChain:  B: PDB Molecule: protein (colicin e7 immunity protein);PDBTitle:  the endonuclease domain of colicin e7 in complex with its inhibitor2 im7 protein
22 c4uhpA_ 
 
not modelled 
39.0 
23 
PDB header: hydrolaseChain:  A: PDB Molecule: large component of pyocin ap41;PDBTitle:  crystal structure of the pyocin ap41 dnase-immunity complex
23 d1a1ga1 
 
not modelled 
37.0 
29 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
24 c2e1cA_ 
 
not modelled 
36.9 
13 
PDB header: transcription/dnaChain:  A: PDB Molecule: putative hth-type transcriptional regulator ph1519;PDBTitle:  structure of putative hth-type transcriptional regulator ph1519/dna2 complex
25 c1nbwA_ 
 
not modelled 
35.9 
20 
PDB header: hydrolaseChain:  A: PDB Molecule: glycerol dehydratase reactivase alpha subunit;PDBTitle:  glycerol dehydratase reactivase
26 c5g2xC_ 
 
not modelled 
34.5 
25 
PDB header: transferaseChain:  C: PDB Molecule: group ii intron-encoded protein ltra;PDBTitle:  structure a of group ii intron complexed with its reverse2 transcriptase
27 d1zfda_ 
 
not modelled 
32.8 
36 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
28 d1w6ga1 
 
not modelled 
31.3 
16 
Fold: SupersandwichSuperfamily: Amine oxidase catalytic domainFamily: Amine oxidase catalytic domain
29 d1a1ia1 
 
not modelled 
30.7 
29 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
30 d1ncsa_ 
 
not modelled 
30.3 
33 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
31 d1r71a_ 
 
not modelled 
30.0 
23 
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: KorB DNA-binding domain-likeFamily: KorB DNA-binding domain-like
32 c1i1gA_ 
 
not modelled 
29.6 
21 
PDB header: transcriptionChain:  A: PDB Molecule: transcriptional regulator lrpa;PDBTitle:  crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus
33 c1r71B_ 
 
not modelled 
29.2 
23 
PDB header: transcription/dnaChain:  B: PDB Molecule: transcriptional repressor protein korb;PDBTitle:  crystal structure of the dna binding domain of korb in complex with2 the operator dna
34 c1va1A_ 
 
not modelled 
29.1 
21 
PDB header: transcriptionChain:  A: PDB Molecule: transcription factor sp1;PDBTitle:  solution structure of transcription factor sp1 dna binding2 domain (zinc finger 1)
35 d1w2za1 
 
not modelled 
26.4 
9 
Fold: SupersandwichSuperfamily: Amine oxidase catalytic domainFamily: Amine oxidase catalytic domain
36 d1a1ha1 
 
not modelled 
25.3 
29 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
37 d1u86a1 
 
not modelled 
25.1 
36 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
38 d1ubdc3 
 
not modelled 
24.1 
25 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
39 d1sp2a_ 
 
not modelled 
23.7 
17 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
40 c2pncB_ 
 
not modelled 
23.5 
13 
PDB header: oxidoreductaseChain:  B: PDB Molecule: copper amine oxidase, liver isozyme;PDBTitle:  crystal structure of bovine plasma copper-containing amine oxidase in2 complex with clonidine
41 d2glia3 
 
not modelled 
23.3 
25 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
42 d1tf3a2 
 
not modelled 
23.2 
25 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
43 c4go1A_ 
 
not modelled 
23.1 
24 
PDB header: transcriptionChain:  A: PDB Molecule: transcriptional regulator lsrr;PDBTitle:  crystal structure of full length transcription repressor lsrr from e.2 coli.
44 d1f2ig1 
 
not modelled 
22.9 
25 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
45 d1d6za1 
 
not modelled 
22.0 
19 
Fold: SupersandwichSuperfamily: Amine oxidase catalytic domainFamily: Amine oxidase catalytic domain
46 d1aaya1 
 
not modelled 
21.7 
29 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
47 d2oqea1 
 
not modelled 
21.3 
9 
Fold: SupersandwichSuperfamily: Amine oxidase catalytic domainFamily: Amine oxidase catalytic domain
48 c2cfxD_ 
 
not modelled 
20.9 
15 
PDB header: transcriptionChain:  D: PDB Molecule: hth-type transcriptional regulator lrpc;PDBTitle:  structure of b.subtilis lrpc
49 c3d8mA_ 
 
not modelled 
20.9 
12 
PDB header: virus/viral proteinChain:  A: PDB Molecule: baseplate protein, receptor binding protein;PDBTitle:  crystal structure of a chimeric receptor binding protein from2 lactococcal phages subspecies tp901-1 and p2
50 c3higB_ 
 
not modelled 
20.0 
13 
PDB header: oxidoreductaseChain:  B: PDB Molecule: amiloride-sensitive amine oxidase;PDBTitle:  crystal structure of human diamine oxidase in complex with the2 inhibitor berenil
51 d1bhia_ 
 
not modelled 
20.0 
29 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
52 c4czdD_ 
 
not modelled 
19.9 
15 
PDB header: lyaseChain:  D: PDB Molecule: putative transcriptional regulator, asnc family;PDBTitle:  sirohaem decarboxylase ahba/b - an enzyme with structural homology2 to the lrp/asnc transcription factor family that is part of the3 alternative haem biosynthesis pathway.
53 c2c10D_ 
 
not modelled 
19.4 
19 
PDB header: oxidoreductaseChain:  D: PDB Molecule: membrane copper amine oxidase;PDBTitle:  the structure of a truncated, soluble version of semicarbazide-2 sensitive amine oxidase
54 d2glia4 
 
not modelled 
19.4 
38 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
55 d1zela1 
 
not modelled 
19.3 
28 
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: Rv2827c N-terminal domain-like
56 c1ekmC_ 
 
not modelled 
19.3 
9 
PDB header: oxidoreductaseChain:  C: PDB Molecule: copper amine oxidase;PDBTitle:  crystal structure at 2.5 a resolution of zinc-substituted2 copper amine oxidase of hansenula polymorpha expressed in3 escherichia coli
57 c2w48D_ 
 
not modelled 
18.5 
24 
PDB header: transcriptionChain:  D: PDB Molecule: sorbitol operon regulator;PDBTitle:  crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae
58 c1d6uB_ 
 
not modelled 
18.1 
19 
PDB header: oxidoreductaseChain:  B: PDB Molecule: copper amine oxidase;PDBTitle:  crystal structure of e. coli amine oxidase anaerobically reduced with2 beta-phenylethylamine
59 c3loyB_ 
 
not modelled 
17.9 
16 
PDB header: oxidoreductaseChain:  B: PDB Molecule: copper amine oxidase;PDBTitle:  crystal structure of a copper-containing benzylamine oxidase from2 hansenula polymorpha
60 c3nbbC_ 
 
not modelled 
17.0 
9 
PDB header: oxidoreductaseChain:  C: PDB Molecule: peroxisomal primary amine oxidase;PDBTitle:  crystal structure of mutant y305f expressed in e. coli in the copper2 amine oxidase from hansenula polymorpha
61 c1pxeA_ 
 
not modelled 
16.9 
45 
PDB header: metal binding proteinChain:  A: PDB Molecule: neural zinc finger transcription factor 1;PDBTitle:  solution structure of a cchhc domain of neural zinc finger2 factor-1
62 d1nbwa3 
 
not modelled 
16.7 
19 
Fold: Ribonuclease H-like motifSuperfamily: Actin-like ATPase domainFamily: ATPase domain of dehydratase reactivase alpha subunit
63 c1ui7A_ 
 
not modelled 
16.4 
16 
PDB header: oxidoreductaseChain:  A: PDB Molecule: phenylethylamine oxidase;PDBTitle:  site-directed mutagenesis of his433 involved in binding of2 copper ion in arthrobacter globiformis amine oxidase
64 d2dlka2 
 
not modelled 
16.1 
38 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
65 c2dbbA_ 
 
not modelled 
15.0 
21 
PDB header: transcriptional regulatorChain:  A: PDB Molecule: putative hth-type transcriptional regulator ph0061;PDBTitle:  crystal structure of ph0061
66 c2bsdC_ 
 
not modelled 
14.6 
18 
PDB header: receptorChain:  C: PDB Molecule: receptor binding protein;PDBTitle:  structure of lactococcal bacteriophage p2 receptor binding protein
67 c1vz0B_ 
 
not modelled 
14.3 
20 
PDB header: nuclear proteinChain:  B: PDB Molecule: chromosome-partitioning protein spo0j;PDBTitle:  chromosome segregation protein spo0j from thermus thermophilus
68 d1ubdc4 
 
not modelled 
14.1 
24 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
69 c3pwxB_ 
 
not modelled 
14.0 
13 
PDB header: structural proteinChain:  B: PDB Molecule: putative flagellar hook-associated protein;PDBTitle:  structure of putative flagellar hook-associated protein from vibrio2 parahaemolyticus
70 c1orxA_ 
 
not modelled 
14.0 
27 
PDB header: antibioticChain:  A: PDB Molecule: kalata b1;PDBTitle:  solution structure of the acyclic permutant des-(24-28)-2 kalata b1.
71 d1tf6a1 
 
not modelled 
13.8 
50 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
72 d1ejga_ 
 
not modelled 
13.7 
30 
Fold: Crambin-likeSuperfamily: Crambin-likeFamily: Crambin-like
73 d1jmna_ 
 
not modelled 
13.7 
20 
Fold: Crambin-likeSuperfamily: Crambin-likeFamily: Crambin-like
74 c4clvB_ 
 
not modelled 
13.4 
18 
PDB header: metal binding proteinChain:  B: PDB Molecule: nickel-cobalt-cadmium resistance protein nccx;PDBTitle:  crystal structure of dodecylphosphocholine-solubilized nccx2 from cupriavidus metallidurans 31a
75 d2cg4a1 
 
not modelled 
13.0 
21 
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: Lrp/AsnC-like transcriptional regulator N-terminal domain
76 c3da0C_ 
 
not modelled 
12.5 
12 
PDB header: viral proteinChain:  C: PDB Molecule: cleaved chimeric receptor binding protein fromPDBTitle:  crystal structure of a cleaved form of a chimeric receptor binding2 protein from lactococcal phages subspecies tp901-1 and p2
77 d1tf3a1 
 
not modelled 
12.5 
50 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
78 c1ksiA_ 
 
not modelled 
12.4 
9 
PDB header: oxidoreductaseChain:  A: PDB Molecule: copper amine oxidase;PDBTitle:  crystal structure of a eukaryotic (pea seedling) copper-containing2 amine oxidase at 2.2a resolution
79 d2glia5 
 
not modelled 
10.7 
50 
Fold: beta-beta-alpha zinc fingersSuperfamily: beta-beta-alpha zinc fingersFamily: Classic zinc finger, C2H2
80 c3abdY_ 
 
not modelled 
10.7 
54 
PDB header: cell cycle/replicationChain:  Y: PDB Molecule: dna polymerase zeta catalytic subunit;PDBTitle:  structure of human rev7 in complex with a human rev3 fragment in a2 monoclinic crystal
81 c5o8kB_ 
 
not modelled 
10.7 
54 
PDB header: replicationChain:  B: PDB Molecule: dna polymerase zeta catalytic subunit;PDBTitle:  crystal structure of mammalian rev7 in complex with rev3 1875-1895
82 c3abdX_ 
 
not modelled 
10.6 
54 
PDB header: cell cycle/replicationChain:  X: PDB Molecule: dna polymerase zeta catalytic subunit;PDBTitle:  structure of human rev7 in complex with a human rev3 fragment in a2 monoclinic crystal
83 c1jjzA_ 
 
not modelled 
10.4 
27 
PDB header: plant proteinChain:  A: PDB Molecule: kalata b1;PDBTitle:  refined structure and disulfide pairing of the kalata b12 peptide
84 c1k48A_ 
 
not modelled 
10.4 
27 
PDB header: plant proteinChain:  A: PDB Molecule: kalata b1;PDBTitle:  refined structure and disulfide pairing of the kalata b12 peptide
85 c3abeZ_ 
 
not modelled 
9.7 
54 
PDB header: cell cycle/replicationChain:  Z: PDB Molecule: dna polymerase zeta catalytic subunit;PDBTitle:  structure of human rev7 in complex with a human rev3 fragment in a2 tetragonal crystal
86 c1zelA_ 
 
not modelled 
9.7 
24 
PDB header: structural genomics, unknown functionChain:  A: PDB Molecule: hypothetical protein rv2827c;PDBTitle:  crystal structure of rv2827c protein from mycobacterium tuberculosis
87 c4kunB_ 
 
not modelled 
9.7 
27 
PDB header: unknown functionChain:  B: PDB Molecule: hypothetical protein lpp1115;PDBTitle:  crystal structure of legionella pneumophila lpp1115 / kaib
88 c1ygmA_ 
 
not modelled 
9.3 
23 
PDB header: membrane proteinChain:  A: PDB Molecule: hypothetical protein bsu31320;PDBTitle:  nmr structure of mistic
89 c4fjoD_ 
 
not modelled 
9.2 
54 
PDB header: transferase/dna binding proteinChain:  D: PDB Molecule: dna polymerase zeta catalytic subunit;PDBTitle:  structure of the rev1 ctd-rev3/7-pol kappa rir complex
90 c4ch7A_ 
 
not modelled 
9.1 
19 
PDB header: transcriptionChain:  A: PDB Molecule: nird-like protein;PDBTitle:  crystal structure of the siroheme decarboxylase nirdl
91 c4bgoA_ 
 
not modelled 
9.0 
7 
PDB header: hydrolaseChain:  A: PDB Molecule: efem m75 peptidase;PDBTitle:  structural and functional role of the imelysin-like protein2 efem from pseudomonas syringae pv. syringae and3 implications in bacterial iron transport
92 d1nbla_ 
 
not modelled 
8.9 
30 
Fold: Crambin-likeSuperfamily: Crambin-likeFamily: Crambin-like
93 c2entA_ 
 
not modelled 
8.9 
33 
PDB header: transcriptionChain:  A: PDB Molecule: krueppel-like factor 15;PDBTitle:  solution structure of the second c2h2-type zinc finger2 domain from human krueppel-like factor 15
94 d1n1ua_ 
 
not modelled 
8.6 
20 
Fold: Knottins (small inhibitors, toxins, lectins)Superfamily: CyclotidesFamily: Kalata B1
95 c1n1uA_ 
 
not modelled 
8.6 
20 
PDB header: antibioticChain:  A: PDB Molecule: kalata b1;PDBTitle:  nmr structure of [ala1,15]kalata b1
96 d1okha_ 
 
not modelled 
8.6 
30 
Fold: Crambin-likeSuperfamily: Crambin-likeFamily: Crambin-like
97 d2b8ta2 
 
not modelled 
8.5 
11 
Fold: Glucocorticoid receptor-like (DNA-binding domain)Superfamily: Glucocorticoid receptor-like (DNA-binding domain)Family: Type II thymidine kinase zinc finger
98 c2f2iA_ 
 
not modelled 
8.4 
27 
PDB header: antimicrobial proteinChain:  A: PDB Molecule: kalata-b1;PDBTitle:  solution structure of [p20d,v21k]-kalata b1
99 d1w7ca1 
 
not modelled 
8.4 
13 
Fold: SupersandwichSuperfamily: Amine oxidase catalytic domainFamily: Amine oxidase catalytic domain