Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1165_(typA)_1294173_1296059
DateWed Jul 31 22:05:25 BST 2019
Unique Job IDfa38f573c46f9359
SequenceVPFRNVAIVA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:62.734 Y:60.732 Z:95.787
Model (left) based on template c4zciA_
Top template information
PDB header:gtp-binding protein
Chain: A: PDB Molecule:gtp-binding protein typa/bipa;
PDBTitle: crystal structure of escherichia coli gtpase bipa/typa
Confidence and coverage
Confidence:100.0% Coverage: 89%
557 residues ( 89% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
612 residues ( 97%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4zciA_
100.0 48
PDB header:gtp-binding protein
Chain: A: PDB Molecule:gtp-binding protein typa/bipa;
PDBTitle: crystal structure of escherichia coli gtpase bipa/typa
2c3j38z_
100.0 25
PDB header:ribosome
Chain: Z: PDB Molecule:40s ribosomal protein s25;
PDBTitle: structure of the d. melanogaster 40s ribosomal proteins
3c3jcrB_
100.0 25
PDB header:splicing
Chain: B: PDB Molecule:hsnu114;
PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
4c5mqfB_
100.0 27
PDB header:splicing
Chain: B: PDB Molecule:116 kda u5 small nuclear ribonucleoprotein component;
PDBTitle: cryo-em structure of a human spliceosome activated for step 2 of2 splicing (c* complex)
5c3jb9B_
100.0 28
PDB header:rna binding protein/rna
Chain: B: PDB Molecule:pre-mrna-splicing factor cwf10;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
6c5z58C_
100.0 28
PDB header:splicing
Chain: C: PDB Molecule:116 kda u5 small nuclear ribonucleoprotein component;
PDBTitle: cryo-em structure of a human activated spliceosome (early bact) at 4.92 angstrom.
7c3b8hA_
100.0 27
PDB header:biosynthetic protein/transferase
Chain: A: PDB Molecule:elongation factor 2;
PDBTitle: structure of the eef2-exoa(e546a)-nad+ complex
8c5ganC_
100.0 21
PDB header:transcription
Chain: C: PDB Molecule:pre-mrna-splicing factor snu114;
PDBTitle: the overall structure of the yeast spliceosomal u4/u6.u5 tri-snrnp at2 3.7 angstrom
9c5lj3C_
100.0 21
PDB header:splicing
Chain: C: PDB Molecule:pre-mrna-splicing factor snu114;
PDBTitle: structure of the core of the yeast spliceosome immediately after2 branching
10c3degC_
100.0 30
PDB header:ribosome
Chain: C: PDB Molecule:gtp-binding protein lepa;
PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp
11c3cb4D_
100.0 27
PDB header:translation
Chain: D: PDB Molecule:gtp-binding protein lepa;
PDBTitle: the crystal structure of lepa
12c5ancK_
100.0 28
PDB header:translation
Chain: K: PDB Molecule:elongation factor tu gtp-binding domain-containing protein
PDBTitle: mechanism of eif6 release from the nascent 60s ribosomal subunit
13c2dy1A_
100.0 25
PDB header:signaling protein, translation
Chain: A: PDB Molecule:elongation factor g;
PDBTitle: crystal structure of ef-g-2 from thermus thermophilus
14c2ywfA_
100.0 31
PDB header:translation
Chain: A: PDB Molecule:gtp-binding protein lepa;
PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus
15c3j25A_
100.0 26
PDB header:translation
Chain: A: PDB Molecule:tetracycline resistance protein tetm;
PDBTitle: structural basis for tetm-mediated tetracycline resistance
16c2rdo7_
100.0 29
PDB header:ribosome
Chain: 7: PDB Molecule:elongation factor g;
PDBTitle: 50s subunit with ef-g(gdpnp) and rrf bound
17c4fn5A_
100.0 32
PDB header:translation/antibiotic
Chain: A: PDB Molecule:elongation factor g 1;
PDBTitle: elongation factor g 1 (pseudomonas aeruginosa) in complex with argyrin2 b
18c2bm0A_
100.0 33
PDB header:elongation factor
Chain: A: PDB Molecule:elongation factor g;
PDBTitle: ribosomal elongation factor g (ef-g) fusidic acid resistant mutant2 t84a
19c2xexA_
100.0 31
PDB header:translation
Chain: A: PDB Molecule:elongation factor g;
PDBTitle: crystal structure of staphylococcus aureus elongation factor2 g
20c5h7lB_
100.0 29
PDB header:translation/ribosomal protein
Chain: B: PDB Molecule:elongation factor 2;
PDBTitle: complex of elongation factor 2-50s ribosomal protein l12
21c6notB_
not modelled 100.0 33
PDB header:translation
Chain: B: PDB Molecule:elongation factor g;
PDBTitle: crystal structure of a full length elongation factor g (ef-g) from2 rickettsia prowazekii
22c1zn0B_
not modelled 100.0 33
PDB header:translation/biosynthetic protein/rna
Chain: B: PDB Molecule:elongation factor g;
PDBTitle: coordinates of rrf and ef-g fitted into cryo-em map of the2 50s subunit bound with both ef-g (gdpnp) and rrf
23c4qjty_
not modelled 100.0 31
PDB header:ribosome
Chain: Y: PDB Molecule:
PDBTitle: crystal structure of elongation factor 4 (ef4/lepa) bound to the2 thermus thermophilus 70s ribosome, 30s subunit of the 70s ribosome
24c3vr1B_
not modelled 100.0 23
PDB header:translation
Chain: B: PDB Molecule:peptide chain release factor 3;
PDBTitle: crystal structure analysis of the translation factor rf3
25c3e3xA_
not modelled 100.0 46
PDB header:hydrolase
Chain: A: PDB Molecule:bipa;
PDBTitle: the c-terminal part of bipa protein from vibrio parahaemolyticus rimd2 2210633
26c3tr5C_
not modelled 100.0 22
PDB header:translation
Chain: C: PDB Molecule:peptide chain release factor 3;
PDBTitle: structure of a peptide chain release factor 3 (prfc) from coxiella2 burnetii
27c2h5eB_
not modelled 100.0 25
PDB header:translation
Chain: B: PDB Molecule:peptide chain release factor rf-3;
PDBTitle: crystal structure of e.coli polypeptide release factor rf3
28c4byrP_
not modelled 100.0 20
PDB header:ribosome
Chain: P: PDB Molecule:eukaryotic translation initiation factor 5b;
PDBTitle: cryo-em reconstruction of the 80s-eif5b-met-itrnamet2 eukaryotic translation initiation complex
29c3izq1_
not modelled 100.0 24
PDB header:ribosomal protein,hydrolase
Chain: 1: PDB Molecule:elongation factor 1 alpha-like protein;
PDBTitle: structure of the dom34-hbs1-gdpnp complex bound to a translating2 ribosome
30c1zunB_
not modelled 100.0 21
PDB header:transferase
Chain: B: PDB Molecule:sulfate adenylate transferase, subunit
PDBTitle: crystal structure of a gtp-regulated atp sulfurylase2 heterodimer from pseudomonas syringae
31c1mj1A_
not modelled 100.0 25
PDB header:ribosome
Chain: A: PDB Molecule:elongation factor tu;
PDBTitle: fitting the ternary complex of ef-tu/trna/gtp and ribosomal proteins2 into a 13 a cryo-em map of the coli 70s ribosome
32c4nclB_
not modelled 100.0 22
PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 5b-like protein;
PDBTitle: crystal structure of eukaryotic translation initiation factor eif5b2 (517-970) from chaetomium thermophilum in complex with gdp
33c1g7cA_
not modelled 100.0 25
PDB header:translation
Chain: A: PDB Molecule:elongation factor 1-alpha;
PDBTitle: yeast eef1a:eef1ba in complex with gdpnp
34c1wb1C_
not modelled 100.0 20
PDB header:protein synthesis
Chain: C: PDB Molecule:translation elongation factor selb;
PDBTitle: crystal structure of translation elongation factor selb2 from methanococcus maripaludis in complex with gdp
35c3p27A_
not modelled 100.0 20
PDB header:signaling protein
Chain: A: PDB Molecule:elongation factor 1 alpha-like protein;
PDBTitle: crystal structure of s. cerevisiae hbs1 protein (gdp-bound form), a2 translational gtpase involved in rna quality control pathways and3 interacting with dom34/pelota
36c4zu9A_
not modelled 100.0 19
PDB header:translation
Chain: A: PDB Molecule:elongation factor selb;
PDBTitle: crystal structure of bacterial selenocysteine-specific elongation2 factor ef-sec
37c3mmpC_
not modelled 100.0 28
PDB header:transferase
Chain: C: PDB Molecule:elongation factor tu 2, elongation factor ts;
PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins
38c1d2eA_
not modelled 100.0 25
PDB header:rna binding protein
Chain: A: PDB Molecule:elongation factor tu (ef-tu);
PDBTitle: crystal structure of mitochondrial ef-tu in complex with gdp
39c4b3xA_
not modelled 100.0 26
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: bacterial translation initiation factor if2 (1-363), apo form
40c3agjC_
not modelled 100.0 28
PDB header:translation/hydrolase
Chain: C: PDB Molecule:elongation factor 1-alpha;
PDBTitle: crystal structure of archaeal pelota and gtp-bound ef1 alpha complex
41c1skqB_
not modelled 100.0 22
PDB header:translation
Chain: B: PDB Molecule:elongation factor 1-alpha;
PDBTitle: the crystal structure of sulfolobus solfataricus elongation factor 1-2 alpha in complex with magnesium and gdp
42c5fg3A_
not modelled 100.0 25
PDB header:translation
Chain: A: PDB Molecule:probable translation initiation factor if-2;
PDBTitle: crystal structure of gdp-bound aif5b from aeropyrum pernix
43c1g7tA_
not modelled 100.0 25
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if2/eif5b;
PDBTitle: x-ray structure of translation initiation factor if2/eif5b2 complexed with gdpnp
44c3j4jA_
not modelled 100.0 27
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: model of full-length t. thermophilus translation initiation factor 22 refined against its cryo-em density from a 30s initiation complex map
45c4zkeA_
not modelled 100.0 19
PDB header:gtp binding protein
Chain: A: PDB Molecule:superkiller protein 7;
PDBTitle: crystal structure of the s. cerevisiae ski7 gtpase-like domain, bound2 to gtp.
46c4crnP_
not modelled 100.0 25
PDB header:translation
Chain: P: PDB Molecule:erf3 in ribosome bound erf1-erf3-gdpnp complex;
PDBTitle: cryo-em of a pretermination complex with erf1 and erf3
47c3izyP_
not modelled 100.0 28
PDB header:rna, ribosomal protein
Chain: P: PDB Molecule:translation initiation factor if-2, mitochondrial;
PDBTitle: mammalian mitochondrial translation initiation factor 2
48c2bvnB_
not modelled 100.0 27
PDB header:elongation factor
Chain: B: PDB Molecule:elongation factor tu;
PDBTitle: e. coli ef-tu:gdpnp in complex with the antibiotic enacyloxin iia
49c4byxV_
not modelled 100.0 19
PDB header:ribosome
Chain: V: PDB Molecule:eukaryotic translation initiation factor 5b, probable
PDBTitle: cryo-em reconstruction of the 80s-eif5b-met-itrnamet eukaryotic2 translation initiation complex
50c3wbkB_
not modelled 100.0 21
PDB header:biosynthetic protein
Chain: B: PDB Molecule:eukaryotic translation initiation factor 5b;
PDBTitle: crystal structure analysis of eukaryotic translation initiation factor2 5b and 1a complex
51c3j2k7_
not modelled 100.0 24
PDB header:ribosome/translation
Chain: 7: PDB Molecule:eukaryotic polypeptide chain release factor 3;
PDB Fragment:unp residues 147-584; PDBTitle: cryo-em structure of the mammalian erf1-erf3-associated termination2 complex
52c5izmA_
not modelled 100.0 24
PDB header:translation
Chain: A: PDB Molecule:selenocysteine-specific elongation factor;
PDBTitle: the crystal structure of human eefsec in complex with gdpnp
53c3wyaA_
not modelled 100.0 25
PDB header:translation
Chain: A: PDB Molecule:elongation factor 1-alpha;
PDBTitle: crystal structure of gdp-bound ef1alpha from pyrococcus horikoshii
54c3agqA_
not modelled 100.0 29
PDB header:translation,transferase
Chain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q
PDBTitle: structure of viral polymerase form ii
55c4kjzD_
not modelled 100.0 26
PDB header:translation
Chain: D: PDB Molecule:translation initiation factor if-2;
PDBTitle: crystal structure of thermus thermophilus if2, apo and gdp-bound forms2 (2-474)
56c1zo1I_
not modelled 100.0 28
PDB header:translation/rna
Chain: I: PDB Molecule:translation initiation factor 2;
PDBTitle: if2, if1, and trna fitted to cryo-em data of e. coli 70s2 initiation complex
57c4upyB_
not modelled 100.0 20
PDB header:ribosome
Chain: B: PDB Molecule:eif5b;
PDBTitle: mammalian 80s hcv-ires initiation complex with eif5b pre-like state
58c2plfA_
not modelled 100.0 21
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit;
PDBTitle: the structure of aif2gamma subunit from the archaeon2 sulfolobus solfataricus in the nucleotide-free form.
59c5k0yS_
not modelled 100.0 22
PDB header:translation
Chain: S: PDB Molecule:eukaryotic initiation factor 2 gamma subunit (eif2-gamma);
PDBTitle: m48s late-stage initiation complex, purified from rabbit reticulocytes2 lysates, displaying eif2 ternary complex and eif3 i and g subunits3 relocated to the intersubunit face
60c3mcaA_
not modelled 100.0 22
PDB header:translation regulation/hydrolase
Chain: A: PDB Molecule:elongation factor 1 alpha-like protein;
PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay
61c1r5nA_
not modelled 100.0 24
PDB header:translation
Chain: A: PDB Molecule:eukaryotic peptide chain release factor gtp-
PDBTitle: crystal structure analysis of sup35 complexed with gdp
62c2elfA_
not modelled 100.0 16
PDB header:translation
Chain: A: PDB Molecule:protein translation elongation factor 1a;
PDBTitle: crystal structure of the selb-like elongation factor ef-pyl from2 methanosarcina mazei
63c1kk3A_
not modelled 100.0 26
PDB header:translation
Chain: A: PDB Molecule:eif2gamma;
PDBTitle: structure of the wild-type large gamma subunit of2 initiation factor eif2 from pyrococcus abyssi complexed3 with gdp-mg2+
64c4n3nA_
not modelled 100.0 20
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5b-like protein,
PDBTitle: crystal structure of eukaryotic translation initiation factor eif5b2 (517-1116) from chaetomium thermophilum, apo form
65c3j81k_
not modelled 100.0 23
PDB header:ribosome
Chain: K: PDB Molecule:es10;
PDBTitle: cryoem structure of a partial yeast 48s preinitiation complex
66c5izkB_
not modelled 100.0 21
PDB header:translation
Chain: B: PDB Molecule:selenocysteine-specific elongation factor;
PDBTitle: the crystal structure of human eefsec in complex with gdp
67c1s0uA_
not modelled 100.0 23
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit;
PDBTitle: eif2gamma apo
68c2hdnJ_
not modelled 100.0 26
PDB header:translation
Chain: J: PDB Molecule:elongation factor ef-tu;
PDBTitle: trypsin-modified elongation factor tu in complex with2 tetracycline at 2.8 angstrom resolution
69d1n0ua2
not modelled 100.0 33
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
70d2dy1a2
not modelled 100.0 26
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
71d2bv3a2
not modelled 100.0 33
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
72d1f60a3
not modelled 100.0 28
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
73d1zunb3
not modelled 99.9 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
74d2c78a3
not modelled 99.9 28
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
75d2bv3a1
not modelled 99.9 35
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Elongation factors
76d2dy1a5
not modelled 99.9 24
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
77d2bv3a5
not modelled 99.9 29
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
78d1n0ua5
not modelled 99.9 20
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
79d1n0ua1
not modelled 99.9 23
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Elongation factors
80d1d2ea3
not modelled 99.9 27
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
81d2dy1a1
not modelled 99.9 23
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Elongation factors
82d1r5ba3
not modelled 99.8 23
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
83d1jnya3
not modelled 99.8 22
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
84c5dn8A_
not modelled 99.8 24
PDB header:gtp-binding protein
Chain: A: PDB Molecule:gtpase der;
PDBTitle: 1.76 angstrom crystal structure of gtp-binding protein der from2 coxiella burnetii in complex with gdp.
85c1mkyA_
not modelled 99.8 26
PDB header:ligand binding protein
Chain: A: PDB Molecule:probable gtp-binding protein enga;
PDBTitle: structural analysis of the domain interactions in der, a switch2 protein containing two gtpase domains
86d1s0ua3
not modelled 99.8 24
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
87d1efca3
not modelled 99.7 28
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
88c3j8gX_
not modelled 99.7 28
PDB header:ribosome
Chain: X: PDB Molecule:gtpase der;
PDBTitle: electron cryo-microscopy structure of enga bound with the 50s2 ribosomal subunit
89c2hjgA_
not modelled 99.7 26
PDB header:hydrolase
Chain: A: PDB Molecule:gtp-binding protein enga;
PDBTitle: the crystal structure of the b. subtilis yphc gtpase in complex with2 gdp
90c3qq5A_
not modelled 99.7 28
PDB header:oxidoreductase
Chain: A: PDB Molecule:small gtp-binding protein;
PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf
91c5hcnA_
not modelled 99.7 16
PDB header:hydrolase
Chain: A: PDB Molecule:gpn-loop gtpase 1;
PDBTitle: gpn-loop gtpase npa3 in complex with gmppcp
92c2e87A_
not modelled 99.7 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ph1320;
PDBTitle: crystal structure of hypothetical gtp-binding protein ph1320 from2 pyrococcus horikoshii ot3, in complex with gdp
93c2qthA_
not modelled 99.7 23
PDB header:nucleotide binding protein
Chain: A: PDB Molecule:gtp-binding protein;
PDBTitle: crystal structure of a gtp-binding protein from the hyperthermophilic2 archaeon sulfolobus solfataricus in complex with gdp
94d2dy1a4
not modelled 99.7 22
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
95d1kk1a3
not modelled 99.6 25
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
96c1jqsC_
not modelled 99.6 29
PDB header:ribosome
Chain: C: PDB Molecule:elongation factor g;
PDBTitle: fitting of l11 protein and elongation factor g (domain g'2 and v) in the cryo-em map of e. coli 70s ribosome bound3 with ef-g and gmppcp, a nonhydrolysable gtp analog
97d1g7sa4
not modelled 99.6 23
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
98c3k53B_
not modelled 99.6 22
PDB header:metal transport
Chain: B: PDB Molecule:ferrous iron transport protein b;
PDBTitle: crystal structure of nfeob from p. furiosus
99c2gedB_
not modelled 99.6 24
PDB header:protein transport, signaling protein
Chain: B: PDB Molecule:signal recognition particle receptor beta subunit;
PDBTitle: signal recognition particle receptor beta-subunit in nucleotide-free2 dimerized form
100d1wb1a4
not modelled 99.6 28
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
101c3ievA_
not modelled 99.6 29
PDB header:nucleotide binding protein/rna
Chain: A: PDB Molecule:gtp-binding protein era;
PDBTitle: crystal structure of era in complex with mggnp and the 3' end of 16s2 rrna
102d1yrba1
not modelled 99.6 17
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
103c1xzqA_
not modelled 99.6 23
PDB header:hydrolase
Chain: A: PDB Molecule:probable trna modification gtpase trme;
PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf
104d2qn6a3
not modelled 99.6 24
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
105c2qptA_
not modelled 99.6 20
PDB header:endocytosis
Chain: A: PDB Molecule:eh domain-containing protein-2;
PDBTitle: crystal structure of an ehd atpase involved in membrane remodelling
106c5ady6_
not modelled 99.5 22
PDB header:ribosome
Chain: 6: PDB Molecule:gtpase hflx;
PDBTitle: cryo-em structures of the 50s ribosome subunit bound with hflx
107c3a1vB_
not modelled 99.5 25
PDB header:transport protein
Chain: B: PDB Molecule:iron(ii) transport protein b;
PDBTitle: crystal structue of the cytosolic domain of t. maritima feob2 iron iransporter in apo form
108c4dheA_
not modelled 99.5 18
PDB header:cell cycle
Chain: A: PDB Molecule:probable gtp-binding protein engb;
PDBTitle: crystal structure of a probable gtp-binding protein engb from2 burkholderia thailandensis
109c1wf3A_
not modelled 99.5 32
PDB header:hydrolase
Chain: A: PDB Molecule:gtp-binding protein;
PDBTitle: crystal structure of gtp-binding protein tt1341 from thermus2 thermophilus hb8
110c3gehA_
not modelled 99.5 23
PDB header:hydrolase
Chain: A: PDB Molecule:trna modification gtpase mnme;
PDBTitle: crystal structure of mnme from nostoc in complex with gdp, folinic2 acid and zn
111c3ibyA_
not modelled 99.5 19
PDB header:transport protein
Chain: A: PDB Molecule:ferrous iron transport protein b;
PDBTitle: structure of cytosolic domain of l. pneumophila feob
112c1egaB_
not modelled 99.5 24
PDB header:hydrolase
Chain: B: PDB Molecule:protein (gtp-binding protein era);
PDBTitle: crystal structure of a widely conserved gtpase era
113d2bm0a4
not modelled 99.5 28
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
114c2wsmB_
not modelled 99.5 19
PDB header:metal binding protein
Chain: B: PDB Molecule:hydrogenase expression/formation protein (hypb);
PDBTitle: crystal structure of hydrogenase maturation factor hypb from2 archaeoglobus fulgidus
115c3md0A_
not modelled 99.5 26
PDB header:transport protein
Chain: A: PDB Molecule:arginine/ornithine transport system atpase;
PDBTitle: crystal structure of arginine/ornithine transport system atpase from2 mycobacterium tuberculosis bound to gdp (a ras-like gtpase3 superfamily protein)
116c3j65o_
not modelled 99.4 17
PDB header:ribosome
Chain: O: PDB Molecule:60s ribosomal protein l15;
PDBTitle: arx1 pre-60s particle. this entry contains the r-proteins and2 biogenesis factors.
117d1n0ua4
not modelled 99.4 18
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
118c6cesA_
not modelled 99.4 20
PDB header:signaling protein
Chain: A: PDB Molecule:ras-related gtp-binding protein a;
PDBTitle: cryo-em structure of gator1-rag
119c2qagC_
not modelled 99.4 16
PDB header:cell cycle, structural protein
Chain: C: PDB Molecule:septin-7;
PDBTitle: crystal structure of human septin trimer 2/6/7
120c5ck3D_
not modelled 99.4 18
PDB header:signaling protein
Chain: D: PDB Molecule:putative signal recognition particle protein;
PDBTitle: signal recognition particle receptor srb-gtp/srx complex from2 chaetomium thermophilum

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite