Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1186c_(-)_1327695_1329311
DateWed Jul 31 22:05:27 BST 2019
Unique Job ID207240456afefab0
SequenceMRIAGVGLGQ ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:71.962 Y:62.670 Z:38.914
Model (left) based on template c3onqB_
Top template information
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:regulator of polyketide synthase expression;
PDBTitle: crystal structure of regulator of polyketide synthase expression2 bad_0249 from bifidobacterium adolescentis
Confidence and coverage
Confidence:100.0% Coverage: 46%
249 residues ( 46% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
517 residues ( 96%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3onqB_
100.0 16
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:regulator of polyketide synthase expression;
PDBTitle: crystal structure of regulator of polyketide synthase expression2 bad_0249 from bifidobacterium adolescentis
2c5ey0A_
99.8 11
PDB header:transcription
Chain: A: PDB Molecule:gtp-sensing transcriptional pleiotropic repressor cody;
PDBTitle: crystal structure of cody from staphylococcus aureus with gtp and ile
3c5ey2A_
99.8 10
PDB header:transcription
Chain: A: PDB Molecule:gtp-sensing transcriptional pleiotropic repressor cody;
PDBTitle: crystal structure of cody from bacillus cereus
4c2gx5B_
99.7 15
PDB header:transcription
Chain: B: PDB Molecule:gtp-sensing transcriptional pleiotropic repressor cody;
PDBTitle: n-terminal gaf domain of transcriptional pleiotropic repressor cody
5d1ko7a1
99.5 15
Fold:MurF and HprK N-domain-like
Superfamily:HprK N-terminal domain-like
Family:HPr kinase/phoshatase HprK N-terminal domain
6c1ko7B_
98.4 15
PDB header:transferase,hydrolase
Chain: B: PDB Molecule:hpr kinase/phosphatase;
PDBTitle: x-ray structure of the hpr kinase/phosphatase from staphylococcus2 xylosus at 1.95 a resolution
7c5n0lC_
98.0 15
PDB header:transcription
Chain: C: PDB Molecule:gtp-sensing transcriptional pleiotropic repressor cody;
PDBTitle: the structure of the cofactor binding gaf domain of the nutrient2 sensor cody from clostridium difficile
8c1knxF_
97.7 13
PDB header:transferase/hydrolase
Chain: F: PDB Molecule:probable hpr(ser) kinase/phosphatase;
PDBTitle: hpr kinase/phosphatase from mycoplasma pneumoniae
9d1knxa1
97.6 13
Fold:MurF and HprK N-domain-like
Superfamily:HprK N-terminal domain-like
Family:HPr kinase/phoshatase HprK N-terminal domain
10d2ioja1
97.5 13
Fold:MurF and HprK N-domain-like
Superfamily:HprK N-terminal domain-like
Family:DRTGG domain
11d1fipa_
97.4 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
12d1ntca_
97.4 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
13c1umqA_
97.3 23
PDB header:dna-binding protein
Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein;
PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity
14d1umqa_
97.3 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
15d1etxa_
97.2 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
16c2m8gX_
97.1 23
PDB header:transcription
Chain: X: PDB Molecule:transcriptional regulator;
PDBTitle: structure, function, and tethering of dna-binding domains in 542 transcriptional activators
17d1etob_
97.1 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
18c5fo5A_
97.0 26
PDB header:transcription
Chain: A: PDB Molecule:hth-type transcriptional regulator metr;
PDBTitle: structure of the dna-binding domain of escherichia coli methionine2 biosynthesis regulator metr
19c1g2hA_
97.0 15
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein tyrr homolog;
PDBTitle: solution structure of the dna-binding domain of the tyrr2 protein of haemophilus influenzae
20d1g2ha_
97.0 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
21c5z4yB_
not modelled 96.9 17
PDB header:dna binding protein
Chain: B: PDB Molecule:cys regulon transcriptional activator;
PDBTitle: crystal structure of pacysb ntd domain with space group p4
22c2esnC_
not modelled 96.9 24
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:probable transcriptional regulator;
PDBTitle: the crystal structure of probable transcriptional regulator pa04772 from pseudomonas aeruginosa
23c1iz1B_
not modelled 96.8 24
PDB header:dna binding protein
Chain: B: PDB Molecule:lysr-type regulatory protein;
PDBTitle: crystal structure of cbnr, a lysr family transcriptional2 regulator
24c5m7nA_
not modelled 96.8 10
PDB header:signaling protein
Chain: A: PDB Molecule:nitrogen assimilation regulatory protein;
PDBTitle: crystal structure of ntrx from brucella abortus in complex with atp2 processed with the crystaldirect automated mounting and cryo-cooling3 technology
25c3m1eA_
not modelled 96.8 17
PDB header:transcription regulator
Chain: A: PDB Molecule:hth-type transcriptional regulator benm;
PDBTitle: crystal structure of benm_dbd
26c3t1bB_
not modelled 96.7 17
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, lysr family;
PDBTitle: crystal structure of the full-length aphb n100e variant
27d2esna1
not modelled 96.7 24
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:LysR-like transcriptional regulators
28c5y9sD_
not modelled 96.7 20
PDB header:transcription
Chain: D: PDB Molecule:vv2_1132;
PDBTitle: crystal structure of vv2_1132, a lysr family transcriptional regulator
29c3ispA_
not modelled 96.7 35
PDB header:transcription
Chain: A: PDB Molecule:hth-type transcriptional regulator
PDBTitle: crystal structure of argp from mycobacterium tuberculosis
30c4l5eA_
not modelled 96.6 13
PDB header:protein binding
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of a. aeolicus ntrc1 dna binding domain
31c3fzjC_
not modelled 96.6 30
PDB header:transcription regulator
Chain: C: PDB Molecule:lysr type regulator of tsambcd;
PDBTitle: tsar low resolution crystal structure, tetragonal form
32c3e7lD_
not modelled 96.5 10
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
33c5y2vA_
not modelled 96.4 21
PDB header:transcription
Chain: A: PDB Molecule:rubisco operon transcriptional regulator;
PDBTitle: strcutrue of the full-length ccmr complexed with 2-og from2 synechocystis pcc6803
34c3k1nB_
not modelled 96.4 17
PDB header:transcription
Chain: B: PDB Molecule:hth-type transcriptional regulator benm;
PDBTitle: crystal structure of full-length benm
35c6g4rE_
not modelled 96.4 21
PDB header:transcription
Chain: E: PDB Molecule:hydrogen peroxide-inducible genes activator;
PDBTitle: corynebacterium glutamicum oxyr c206s mutant, h2o2-bound
36c5ydwB_
not modelled 96.4 23
PDB header:dna binding protein
Chain: B: PDB Molecule:cell density-dependent motility repressor;
PDBTitle: full-length structure of hypt from salmonella typhimuriuma2 (hypochlorite-specific lysr-type transcriptional regulator)
37c3fzvC_
not modelled 96.3 16
PDB header:transcription regulator
Chain: C: PDB Molecule:probable transcriptional regulator;
PDBTitle: crystal structure of pa01 protein, putative lysr family2 transcriptional regulator from pseudomonas aeruginosa
38d1b9ma1
not modelled 96.3 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:N-terminal domain of molybdate-dependent transcriptional regulator ModE
39c4pzjA_
not modelled 96.3 20
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, lysr family;
PDBTitle: 1.60 angstrom resolution crystal structure of a transcriptional2 regulator of the lysr family from eggerthella lenta dsm 2243
40d1ixca1
not modelled 96.2 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:LysR-like transcriptional regulators
41c3hhgF_
not modelled 96.1 20
PDB header:transcription regulator
Chain: F: PDB Molecule:transcriptional regulator, lysr family;
PDBTitle: structure of crga, a lysr-type transcriptional regulator from2 neisseria meningitidis.
42c1ojlD_
not modelled 95.9 27
PDB header:response regulator
Chain: D: PDB Molecule:transcriptional regulatory protein zrar;
PDBTitle: crystal structure of a sigma54-activator suggests the mechanism for2 the conformational switch necessary for sigma54 binding
43c1b9nA_
not modelled 95.9 22
PDB header:transcription
Chain: A: PDB Molecule:protein (mode);
PDBTitle: regulator from escherichia coli
44c2ijlB_
not modelled 94.7 11
PDB header:transcription
Chain: B: PDB Molecule:molybdenum-binding transcriptional repressor;
PDBTitle: the structure of a putative mode from agrobacterium tumefaciens.
45c1zljE_
not modelled 94.4 15
PDB header:transcription
Chain: E: PDB Molecule:dormancy survival regulator;
PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic2 response regulator dosr c-terminal domain
46c4lfuA_
not modelled 93.7 14
PDB header:dna binding protein
Chain: A: PDB Molecule:regulatory protein sdia;
PDBTitle: crystal structure of escherichia coli sdia in the space group c2
47c4x6gG_
not modelled 93.4 20
PDB header:dna binding protein
Chain: G: PDB Molecule:oxyr;
PDBTitle: full-length oxyr c199d from pseudomonas aeruginosa
48c3qp5C_
not modelled 93.3 14
PDB header:transcription
Chain: C: PDB Molecule:cvir transcriptional regulator;
PDBTitle: crystal structure of cvir bound to antagonist chlorolactone (cl)
49d1a04a1
not modelled 93.0 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:C-terminal effector domain of the bipartite response regulators
Family:GerE-like (LuxR/UhpA family of transcriptional regulators)
50c2w1tB_
not modelled 92.8 20
PDB header:transcription
Chain: B: PDB Molecule:stage v sporulation protein t;
PDBTitle: crystal structure of b. subtilis spovt
51c2rnjA_
not modelled 92.6 14
PDB header:transcription
Chain: A: PDB Molecule:response regulator protein vrar;
PDBTitle: nmr structure of the s. aureus vrar dna binding domain
52d1p4wa_
not modelled 92.3 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:C-terminal effector domain of the bipartite response regulators
Family:GerE-like (LuxR/UhpA family of transcriptional regulators)
53c3sztB_
not modelled 92.1 19
PDB header:transcription
Chain: B: PDB Molecule:quorum-sensing control repressor;
PDBTitle: quorum sensing control repressor, qscr, bound to n-3-oxo-dodecanoyl-l-2 homoserine lactone
54d1l3la1
not modelled 91.9 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:C-terminal effector domain of the bipartite response regulators
Family:GerE-like (LuxR/UhpA family of transcriptional regulators)
55c5o8yG_
not modelled 91.8 9
PDB header:transcription
Chain: G: PDB Molecule:transcriptional regulatory protein rcsb;
PDBTitle: conformational dynamism for dna interaction in salmonella typhimurium2 rcsb response regulator.
56c5chhA_
not modelled 91.7 18
PDB header:transcription
Chain: A: PDB Molecule:arac family transcriptional regulator;
PDBTitle: crystal structure of transcriptional regulator cdpr from pseudomonas2 aeruginosa
57d1yioa1
not modelled 91.6 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:C-terminal effector domain of the bipartite response regulators
Family:GerE-like (LuxR/UhpA family of transcriptional regulators)
58c2q0oA_
not modelled 91.5 11
PDB header:transcription
Chain: A: PDB Molecule:probable transcriptional activator protein trar;
PDBTitle: crystal structure of an anti-activation complex in bacterial quorum2 sensing
59d1fsea_
not modelled 91.4 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:C-terminal effector domain of the bipartite response regulators
Family:GerE-like (LuxR/UhpA family of transcriptional regulators)
60c2w1rA_
not modelled 91.2 15
PDB header:transcription
Chain: A: PDB Molecule:stage v sporulation protein t;
PDBTitle: crystal structure of the c-terminal domain of b. subtilis spovt
61c1h0mD_
not modelled 91.2 17
PDB header:transcription/dna
Chain: D: PDB Molecule:transcriptional activator protein trar;
PDBTitle: three-dimensional structure of the quorum sensing protein trar bound2 to its autoinducer and to its target dna
62c6jqsA_
not modelled 91.1 24
PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding response regulator;
PDBTitle: structure of transcription factor, gere
63c2krfB_
not modelled 91.0 14
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulatory protein coma;
PDBTitle: nmr solution structure of the dna binding domain of competence protein2 a
64c6ideA_
not modelled 89.8 13
PDB header:transcription/dna
Chain: A: PDB Molecule:transcriptional regulator luxr family;
PDBTitle: crystal structure of the vibrio cholera vqma-ligand-dna complex2 provides molecular mechanisms for drug design
65d1rp3a2
not modelled 89.7 9
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
66c4if4A_
not modelled 89.4 14
PDB header:transcription
Chain: A: PDB Molecule:response regulator protein vrar;
PDBTitle: crystal structure of the magnesium and beryllofluoride-activated vrar2 from staphylococcus aureus
67c6c03A_
not modelled 89.4 11
PDB header:transcription
Chain: A: PDB Molecule:putative rna polymerase ecf-subfamily sigma factor;
PDBTitle: the crystal structure streptomyces venezuelae rsbn-bldn complex
68c1x3uA_
not modelled 89.2 18
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein fixj;
PDBTitle: solution structure of the c-terminal transcriptional2 activator domain of fixj from sinorhizobium melilot
69d2coba1
not modelled 89.1 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Psq domain
70d2jn6a1
not modelled 88.4 10
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Cgl2762-like
71c2jpcA_
not modelled 88.3 14
PDB header:dna binding protein
Chain: A: PDB Molecule:ssrb;
PDBTitle: ssrb dna binding protein
72c5ae5A_
not modelled 88.1 18
PDB header:transcription
Chain: A: PDB Molecule:lysr-type regulatory protein;
PDBTitle: structures of inactive and activated dntr provide conclusive evidence2 for the mechanism of action of lysr transcription factors
73c3cloC_
not modelled 88.0 22
PDB header:transcription regulator
Chain: C: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of putative transcriptional regulator containing a2 luxr dna binding domain (np_811094.1) from bacteroides3 thetaiotaomicron vpi-5482 at 2.04 a resolution
74c2xjaD_
not modelled 88.0 24
PDB header:ligase
Chain: D: PDB Molecule:udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2,6-
PDBTitle: structure of mure from m.tuberculosis with dipeptide and adp
75c3hugA_
not modelled 87.8 11
PDB header:transcription/membrane protein
Chain: A: PDB Molecule:rna polymerase sigma factor;
PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
76c2wtzC_
not modelled 87.5 22
PDB header:ligase
Chain: C: PDB Molecule:udp-n-acetylmuramoyl-l-alanyl-d-glutamate-
PDBTitle: mure ligase of mycobacterium tuberculosis
77c4czdA_
not modelled 87.2 13
PDB header:lyase
Chain: A: PDB Molecule:putative transcriptional regulator, asnc family;
PDBTitle: sirohaem decarboxylase ahba/b - an enzyme with structural homology2 to the lrp/asnc transcription factor family that is part of the3 alternative haem biosynthesis pathway.
78c2cfxD_
not modelled 87.0 24
PDB header:transcription
Chain: D: PDB Molecule:hth-type transcriptional regulator lrpc;
PDBTitle: structure of b.subtilis lrpc
79d2cg4a1
not modelled 86.1 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
80c3klnC_
not modelled 85.9 19
PDB header:transcription
Chain: C: PDB Molecule:transcriptional regulator, luxr family;
PDBTitle: vibrio cholerae vpst
81c5f64C_
not modelled 85.3 16
PDB header:transcription regulator
Chain: C: PDB Molecule:positive transcription regulator evga;
PDBTitle: putative positive transcription regulator (sensor evgs) from shigella2 flexneri
82d1or7a1
not modelled 85.1 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
83c2vbzA_
not modelled 85.1 24
PDB header:dna-binding protein
Chain: A: PDB Molecule:transcriptional regulatory protein;
PDBTitle: feast or famine regulatory protein (rv3291c)from m.2 tuberculosis complexed with l-tryptophan
84d2cfxa1
not modelled 85.1 24
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
85c2e7xA_
not modelled 84.6 24
PDB header:transcription regulator
Chain: A: PDB Molecule:150aa long hypothetical transcriptional regulator;
PDBTitle: structure of the lrp/asnc like transcriptional regulator from2 sulfolobus tokodaii 7 complexed with its cognate ligand
86c2p6tH_
not modelled 84.5 12
PDB header:transcription
Chain: H: PDB Molecule:transcriptional regulator, lrp/asnc family;
PDBTitle: crystal structure of transcriptional regulator nmb0573 and l-leucine2 complex from neisseria meningitidis
87c5hevC_
not modelled 84.2 13
PDB header:transcription
Chain: C: PDB Molecule:response regulator protein vrar;
PDBTitle: crystal structure of the beryllofluoride-activated liar from2 enterococcus faecium
88d1i1ga1
not modelled 83.7 24
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
89c2vjwA_
not modelled 83.6 13
PDB header:hydrolase
Chain: A: PDB Molecule:gaf family protein;
PDBTitle: crystal structure of the second gaf domain of devs from2 mycobacterium smegmatis
90d2cyya1
not modelled 83.5 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
91c2l4aA_
not modelled 83.4 21
PDB header:dna binding protein
Chain: A: PDB Molecule:leucine responsive regulatory protein;
PDBTitle: nmr structure of the dna-binding domain of e.coli lrp
92c4g3kB_
not modelled 83.0 14
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator nlh1;
PDBTitle: crystal structure of a. aeolicus nlh1 gaf domain in an inactive state
93c1rnlA_
not modelled 82.8 14
PDB header:signal transduction protein
Chain: A: PDB Molecule:nitrate/nitrite response regulator protein narl;
PDBTitle: the nitrate/nitrite response regulator protein narl from narl
94c1zn2A_
not modelled 82.7 19
PDB header:transcription regulator
Chain: A: PDB Molecule:response regulatory protein;
PDBTitle: low resolution structure of response regulator styr
95d1xsva_
not modelled 82.7 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:YlxM/p13-like
96d1s7oa_
not modelled 82.2 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:YlxM/p13-like
97c2lvsA_
not modelled 82.1 17
PDB header:dna binding protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: nmr solution structure of a crispr repeat binding protein
98c5fgmA_
not modelled 81.6 16
PDB header:hydrolase
Chain: A: PDB Molecule:ecf rna polymerase sigma factor sigr;
PDBTitle: streptomyces coelicolor sigr region 4
99c3oovA_
not modelled 81.3 13
PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein, putative;
PDBTitle: crystal structure of a methyl-accepting chemotaxis protein, residues2 122 to 287
100c5zx3F_
not modelled 81.3 12
PDB header:transcription
Chain: F: PDB Molecule:ecf rna polymerase sigma factor sigh;
PDBTitle: mycobacterium tuberculosis rna polymerase holoenzyme with ecf sigma2 factor sigma h
101c2cg4B_
not modelled 81.2 20
PDB header:transcription
Chain: B: PDB Molecule:regulatory protein asnc;
PDBTitle: structure of e.coli asnc
102c6oeiA_
not modelled 81.1 10
PDB header:structural protein
Chain: A: PDB Molecule:spindle pole body component spc42,sigma-54-dependent
PDBTitle: yeast spc42 n-terminal coiled-coil fused to pdb: 3k2n
103c3i4pA_
not modelled 80.7 15
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, asnc family;
PDBTitle: crystal structure of asnc family transcriptional regulator from2 agrobacterium tumefaciens
104c3k2nB_
not modelled 80.3 10
PDB header:transcription regulator
Chain: B: PDB Molecule:sigma-54-dependent transcriptional regulator;
PDBTitle: the crystal structure of sigma-54-dependent transcriptional regulator2 domain from chlorobium tepidum tls
105c2dbbA_
not modelled 80.2 14
PDB header:transcriptional regulator
Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph0061;
PDBTitle: crystal structure of ph0061
106c1rp3G_
not modelled 80.1 10
PDB header:transcription
Chain: G: PDB Molecule:rna polymerase sigma factor sigma-28 (flia);
PDBTitle: cocrystal structure of the flagellar sigma/anti-sigma complex, sigma-2 28/flgm
107c3c3wB_
not modelled 80.1 16
PDB header:transcription
Chain: B: PDB Molecule:two component transcriptional regulatory protein devr;
PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic response2 regulator dosr
108d1ulya_
not modelled 80.0 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Hypothetical protein PH1932
109c6dvdF_
not modelled 79.7 11
PDB header:transferase/dna
Chain: F: PDB Molecule:ecf rna polymerase sigma factor sigl;
PDBTitle: crystal structure of mycobacterium tuberculosis transcription2 initiation complex(ecf sigma factor l) with 6 nt spacer and bromine3 labelled in position "-11
110c4pcqC_
not modelled 78.8 31
PDB header:transcription
Chain: C: PDB Molecule:possible transcriptional regulatory protein (probably
PDBTitle: crystal structure of mtbaldr (rv2779c)
111d1i3ja_
not modelled 78.7 29
Fold:DNA-binding domain of intron-encoded endonucleases
Superfamily:DNA-binding domain of intron-encoded endonucleases
Family:DNA-binding domain of intron-encoded endonucleases
112c2e1cA_
not modelled 78.5 17
PDB header:transcription/dna
Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519;
PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex
113c4czdD_
not modelled 78.3 12
PDB header:lyase
Chain: D: PDB Molecule:putative transcriptional regulator, asnc family;
PDBTitle: sirohaem decarboxylase ahba/b - an enzyme with structural homology2 to the lrp/asnc transcription factor family that is part of the3 alternative haem biosynthesis pathway.
114c4g6qA_
not modelled 77.9 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein kfla_6221 from2 kribbella flavida dsm 17836
115c3rqiA_
not modelled 77.4 22
PDB header:transcription
Chain: A: PDB Molecule:response regulator protein;
PDBTitle: crystal structure of a response regulator protein from burkholderia2 pseudomallei with a phosphorylated aspartic acid, calcium ion and3 citrate
116c1i1gA_
not modelled 77.4 28
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator lrpa;
PDBTitle: crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus
117c1bl0A_
not modelled 76.9 8
PDB header:transcription/dna
Chain: A: PDB Molecule:protein (multiple antibiotic resistance protein);
PDBTitle: multiple antibiotic resistance protein (mara)/dna complex
118c4wxoA_
not modelled 76.7 16
PDB header:transferase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: sadc (300-487) from pseudomonas aeruginosa pao1
119c5z7iC_
not modelled 76.6 21
PDB header:dna binding protein/dna
Chain: C: PDB Molecule:cell cycle regulatory protein gcra;
PDBTitle: caulobacter crescentus gcra dna-binding domain(dbd)in complex with2 unmethylated dsdna
120c1or7A_
not modelled 76.4 18
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma-e factor;
PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea

Binding site prediction 

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