Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1202_(dapE)_1345266_1346330
DateWed Jul 31 22:05:29 BST 2019
Unique Job ID201f15f0d4522c3b
SequenceVLDLRGDPIE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:49.742 Y:51.085 Z:87.024
Model (left) based on template c3tx8A_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase;
PDBTitle: crystal structure of a succinyl-diaminopimelate desuccinylase (arge)2 from corynebacterium glutamicum atcc 13032 at 2.97 a resolution
Confidence and coverage
Confidence:100.0% Coverage: 99%
350 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3tx8A_
100.0 56
PDB header:hydrolase
Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase;
PDBTitle: crystal structure of a succinyl-diaminopimelate desuccinylase (arge)2 from corynebacterium glutamicum atcc 13032 at 2.97 a resolution
2c2rb7A_
100.0 23
PDB header:hydrolase
Chain: A: PDB Molecule:peptidase, m20/m25/m40 family;
PDBTitle: crystal structure of co-catalytic metallopeptidase (yp_387682.1) from2 desulfovibrio desulfuricans g20 at 1.60 a resolution
3c3pfoB_
100.0 18
PDB header:hydrolase
Chain: B: PDB Molecule:putative acetylornithine deacetylase;
PDBTitle: crystal structure of a putative acetylornithine deacetylase (rpa2325)2 from rhodopseudomonas palustris cga009 at 1.90 a resolution
4c5k8nE_
100.0 20
PDB header:hydrolase
Chain: E: PDB Molecule:5-nitroanthranilic acid aminohydrolase;
PDBTitle: 5naa-bound 5-nitroanthranilate aminohydrolase
5c1vgyB_
100.0 24
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:succinyl-diaminopimelate desuccinylase;
PDBTitle: crystal structure of succinyl diaminopimelate desuccinylase
6c3ct9B_
100.0 24
PDB header:hydrolase
Chain: B: PDB Molecule:acetylornithine deacetylase;
PDBTitle: crystal structure of a putative zinc peptidase (np_812461.1) from2 bacteroides thetaiotaomicron vpi-5482 at 2.31 a resolution
7c3gb0A_
100.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:peptidase t;
PDBTitle: crystal structure of aminopeptidase pept (np_980509.1) from bacillus2 cereus atcc 10987 at 2.04 a resolution
8c2f7vA_
100.0 25
PDB header:hydrolase
Chain: A: PDB Molecule:aectylcitrulline deacetylase;
PDBTitle: structure of acetylcitrulline deacetylase complexed with2 one co
9c3ic1A_
100.0 19
PDB header:hydrolase
Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase;
PDBTitle: crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase2 from haemophilus influenzae
10c1cg2D_
100.0 23
PDB header:metallocarboxypeptidase
Chain: D: PDB Molecule:carboxypeptidase g2;
PDBTitle: carboxypeptidase g2
11c2pokB_
100.0 21
PDB header:hydrolase
Chain: B: PDB Molecule:peptidase, m20/m25/m40 family;
PDBTitle: crystal structure of a m20 family metallo peptidase from streptococcus2 pneumoniae
12c4ewtC_
100.0 13
PDB header:hydrolase
Chain: C: PDB Molecule:peptidase, m20/m25/m40 family;
PDBTitle: the crystal structure of a putative aminohydrolase from methicillin2 resistant staphylococcus aureus
13c3rzaA_
100.0 21
PDB header:hydrolase
Chain: A: PDB Molecule:tripeptidase;
PDBTitle: crystal structure of a tripeptidase (sav1512) from staphylococcus2 aureus subsp. aureus mu50 at 2.10 a resolution
14c3mruB_
100.0 21
PDB header:hydrolase
Chain: B: PDB Molecule:aminoacyl-histidine dipeptidase;
PDBTitle: crystal structure of aminoacylhistidine dipeptidase from vibrio2 alginolyticus
15c3dljB_
100.0 19
PDB header:hydrolase
Chain: B: PDB Molecule:beta-ala-his dipeptidase;
PDBTitle: crystal structure of human carnosine dipeptidase 1
16c2zogA_
100.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:cytosolic non-specific dipeptidase;
PDBTitle: crystal structure of mouse carnosinase cn2 complexed with zn and2 bestatin
17c2qyvB_
100.0 21
PDB header:hydrolase
Chain: B: PDB Molecule:xaa-his dipeptidase;
PDBTitle: crystal structure of putative xaa-his dipeptidase (yp_718209.1) from2 haemophilus somnus 129pt at 2.11 a resolution
18c4q7aD_
100.0 25
PDB header:hydrolase
Chain: D: PDB Molecule:n-acetyl-ornithine/n-acetyl-lysine deacetylase;
PDBTitle: crystal structure of n-acetyl-ornithine/n-acetyl-lysine deacetylase2 from sphaerobacter thermophilus
19c4g1pA_
100.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:cys-gly metallodipeptidase dug1;
PDBTitle: structural and mechanistic basis of substrate recognition by novel di-2 peptidase dug1p from saccharomyces cerevisiae
20c3x3eA_
100.0 25
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetyl-lysine deacetylase;
PDBTitle: crystal structure of lysk from thermus thermophilus complex with2 lysine
21c3pfeA_
not modelled 100.0 19
PDB header:hydrolase
Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase;
PDBTitle: crystal structure of a m20a metallo peptidase (dape, lpg0809) from2 legionella pneumophila subsp. pneumophila str. philadelphia 1 at 1.503 a resolution
22c3ramC_
not modelled 100.0 14
PDB header:hydrolase
Chain: C: PDB Molecule:hmra protein;
PDBTitle: crystal structure of hmra
23c1ysjB_
not modelled 100.0 18
PDB header:hydrolase
Chain: B: PDB Molecule:protein yxep;
PDBTitle: crystal structure of bacillus subtilis yxep protein (apc1829), a2 dinuclear metal binding peptidase from m20 family
24c3ifeA_
not modelled 100.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:peptidase t;
PDBTitle: 1.55 angstrom resolution crystal structure of peptidase t (pept-1)2 from bacillus anthracis str. 'ames ancestor'.
25c5i4mB_
not modelled 100.0 19
PDB header:hydrolase
Chain: B: PDB Molecule:amidase, hydantoinase/carbamoylase family;
PDBTitle: crystal structure of amidase, hydantoinase/carbamoylase family from2 burkholderia vietnamiensis
26c2v8gD_
not modelled 100.0 19
PDB header:hydrolase
Chain: D: PDB Molecule:beta-alanine synthase;
PDBTitle: crystal structure of beta-alanine synthase from2 saccharomyces kluyveri in complex with the product beta-3 alanine
27c1lfwA_
not modelled 100.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:pepv;
PDBTitle: crystal structure of pepv
28c1vixA_
not modelled 100.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:peptidase t;
PDBTitle: crystal structure of a putative peptidase t
29c3n5fB_
not modelled 100.0 17
PDB header:hydrolase
Chain: B: PDB Molecule:n-carbamoyl-l-amino acid hydrolase;
PDBTitle: crystal structure of l-n-carbamoylase from geobacillus2 stearothermophilus cect43
30c2imoA_
not modelled 100.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:allantoate amidohydrolase;
PDBTitle: crystal structure of allantoate amidohydrolase from escherichia coli2 at ph 4.6
31c2q43A_
not modelled 100.0 14
PDB header:hydrolase
Chain: A: PDB Molecule:iaa-amino acid hydrolase ilr1-like 2;
PDBTitle: ensemble refinement of the protein crystal structure of iaa-aminoacid2 hydrolase from arabidopsis thaliana gene at5g56660
32c4wjbB_
not modelled 100.0 17
PDB header:hydrolase
Chain: B: PDB Molecule:putative amidohydrolase/peptidase;
PDBTitle: x-ray crystal structure of a putative amidohydrolase/peptidase from2 burkholderia cenocepacia
33c3khzA_
not modelled 100.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:putative dipeptidase sacol1801;
PDBTitle: crystal structure of r350a mutant of staphylococcus aureus2 metallopeptidase (sapep/dape) in the apo-form
34c4pxeB_
not modelled 100.0 15
PDB header:hydrolase
Chain: B: PDB Molecule:ureidoglycolate hydrolase;
PDBTitle: the crystal structure of atuah in complex with glyoxylate
35c6c0dA_
not modelled 100.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:amidase, hydantoinase/carbamoylase family;
PDBTitle: crystal structure of an amidase (hydantoinase/carbamoylase family)2 from burkholderia phymatum
36c5ds0F_
not modelled 100.0 13
PDB header:hydrolase
Chain: F: PDB Molecule:peptidase m42;
PDBTitle: crystal structure of tet aminopeptidase from marine sediment archaeon2 thaumarchaeota archaeon scgc ab-539-e09
37c5tp4B_
not modelled 100.0 20
PDB header:hydrolase
Chain: B: PDB Molecule:amidase, hydantoinase/carbamoylase family;
PDBTitle: crystal structure of a hydantoinase/carbamoylase family amidase from2 burkholderia ambifaria
38c1vheA_
not modelled 100.0 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:aminopeptidase/glucanase homolog;
PDBTitle: crystal structure of a aminopeptidase/glucanase homolog
39c4wwvA_
not modelled 100.0 15
PDB header:hydrolase
Chain: A: PDB Molecule:aminopeptidase from family m42;
PDBTitle: aminopeptidase apdkam598 from the archaeon desulfurococcus2 kamchatkensis
40c3isxA_
not modelled 100.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:endoglucanase;
PDBTitle: crystal structure of endoglucanase (tm1050) from thermotoga maritima2 at 1.40 a resolution
41c2cf4A_
not modelled 100.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:protein ph0519;
PDBTitle: pyrococcus horikoshii tet1 peptidase can assemble into a2 tetrahedron or a large octahedral shell
42c4mmoB_
not modelled 100.0 14
PDB header:hydrolase
Chain: B: PDB Molecule:sso-cp2 metallo-carboxypetidase;
PDBTitle: the crystal structure of a m20 family metallo-carboxypeptidase sso-cp22 from sulfolobus solfataricus
43c1yloA_
not modelled 100.0 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein sf2450;
PDBTitle: crystal structure of protein of unknown function (possible2 aminopeptidase) s2589 from shigella flexneri 2a str. 2457t
44c2pe3A_
not modelled 100.0 13
PDB header:hydrolase
Chain: A: PDB Molecule:354aa long hypothetical operon protein frv;
PDBTitle: crystal structure of frv operon protein frvx (ph1821)from pyrococcus2 horikoshii ot3
45c3io1B_
not modelled 100.0 18
PDB header:hydrolase
Chain: B: PDB Molecule:aminobenzoyl-glutamate utilization protein;
PDBTitle: crystal structure of aminobenzoyl-glutamate utilization2 protein from klebsiella pneumoniae
46c1y0yA_
not modelled 100.0 17
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:frv operon protein frvx;
PDBTitle: crystal structure of tetrahedral aminopeptidase from p. horikoshii in2 complex with amastatin
47c1vhoA_
not modelled 100.0 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:endoglucanase;
PDBTitle: crystal structure of a putative peptidase/endoglucanase
48c3kl9F_
not modelled 100.0 14
PDB header:hydrolase
Chain: F: PDB Molecule:glutamyl aminopeptidase;
PDBTitle: crystal structure of pepa from streptococcus pneumoniae
49c2fvgA_
not modelled 100.0 11
PDB header:hydrolase
Chain: A: PDB Molecule:endoglucanase;
PDBTitle: crystal structure of endoglucanase (tm1049) from thermotoga maritima2 at 2.01 a resolution
50c3cpxC_
not modelled 100.0 14
PDB header:hydrolase
Chain: C: PDB Molecule:aminopeptidase, m42 family;
PDBTitle: crystal structure of putative m42 glutamyl aminopeptidase2 (yp_676701.1) from cytophaga hutchinsonii atcc 33406 at 2.39 a3 resolution
51c4h2kA_
not modelled 100.0 22
PDB header:hydrolase
Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase;
PDBTitle: crystal structure of the catalytic domain of succinyl-diaminopimelate2 desuccinylase from haemophilus influenzae
52d1z2la1
not modelled 100.0 17
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
53d1vixa1
not modelled 100.0 24
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
54c3t6mA_
not modelled 100.0 27
PDB header:hydrolase
Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase;
PDBTitle: crystal structure of the catalytic domain of dape protein from2 v.cholerea in the zn bound form
55d1lfwa1
not modelled 100.0 19
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
56c2greC_
not modelled 100.0 18
PDB header:hydrolase
Chain: C: PDB Molecule:deblocking aminopeptidase;
PDBTitle: crystal structure of deblocking aminopeptidase from bacillus cereus
57d1cg2a1
not modelled 100.0 33
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
58d1fnoa4
not modelled 100.0 20
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
59d1vhea2
not modelled 100.0 24
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
60d1yloa2
not modelled 100.0 23
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
61d1xfoa2
not modelled 100.0 19
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
62d1vgya1
not modelled 100.0 21
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
63d1vhoa2
not modelled 99.9 21
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
64d1xmba1
not modelled 99.9 17
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
65d1r3na1
not modelled 99.9 18
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
66d2fvga2
not modelled 99.9 16
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
67c1q7lA_
not modelled 99.9 21
PDB header:hydrolase
Chain: A: PDB Molecule:aminoacylase-1;
PDBTitle: zn-binding domain of the t347g mutant of human aminoacylase-2 i
68d1ysja1
not modelled 99.9 17
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
69d2grea2
not modelled 99.9 26
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
70c2glfB_
not modelled 99.6 12
PDB header:hydrolase
Chain: B: PDB Molecule:probable m18-family aminopeptidase 1;
PDBTitle: crystal structure of aminipeptidase (m18 family) from thermotoga2 maritima
71c6qqlB_
not modelled 99.6 20
PDB header:transferase
Chain: B: PDB Molecule:glutamine cyclotransferase;
PDBTitle: crystal structure of porphyromonas gingivalis glutaminyl cyclase
72c4fuuA_
not modelled 99.5 17
PDB header:hydrolase
Chain: A: PDB Molecule:leucine aminopeptidase;
PDBTitle: crystal structure of a leucine aminopeptidase precursor (bt_2548) from2 bacteroides thetaiotaomicron vpi-5482 at 1.30 a resolution
73c3l6sA_
not modelled 99.5 12
PDB header:hydrolase
Chain: A: PDB Molecule:aspartyl aminopeptidase;
PDBTitle: crystal structure of human aspartyl aminopeptidase (dnpep), in complex2 with aspartic acid hydroxamate
74d1vgya2
not modelled 99.4 28
Fold:Ferredoxin-like
Superfamily:Bacterial exopeptidase dimerisation domain
Family:Bacterial exopeptidase dimerisation domain
75d1y0ya2
not modelled 99.4 22
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
76c4r8fB_
not modelled 99.4 13
PDB header:hydrolase
Chain: B: PDB Molecule:vacuolar aminopeptidase 1;
PDBTitle: crystal structure of yeast aminopeptidase 1 (ape1)
77c3tc8A_
not modelled 99.4 22
PDB header:hydrolase
Chain: A: PDB Molecule:leucine aminopeptidase;
PDBTitle: crystal structure of a zn-dependent exopeptidase (bdi_3547) from2 parabacteroides distasonis atcc 8503 at 1.06 a resolution
78c4fbeA_
not modelled 99.4 21
PDB header:transferase, hydrolase
Chain: A: PDB Molecule:cg5976, isoform b;
PDBTitle: crystal structure of the c136a/c164a variant of mitochondrial isoform2 of glutaminyl cyclase from drosophila melanogaster
79d1cg2a2
not modelled 99.4 22
Fold:Ferredoxin-like
Superfamily:Bacterial exopeptidase dimerisation domain
Family:Bacterial exopeptidase dimerisation domain
80c4emeB_
not modelled 99.4 11
PDB header:hydrolase
Chain: B: PDB Molecule:m18 aspartyl aminopeptidase;
PDBTitle: x-ray crystal structure and specificity of the plasmodium falciparum2 malaria aminopeptidase
81c3varA_
not modelled 99.4 11
PDB header:hydrolase
Chain: A: PDB Molecule:aspartyl aminopeptidase;
PDBTitle: crystal structure of dnpep, znzn form
82c4mhzA_
not modelled 99.4 21
PDB header:transferase
Chain: A: PDB Molecule:glutaminyl cyclase, putative;
PDBTitle: crystal structure of apo-form glutaminyl cyclase from ixodes2 scapularis in complex with pbd150
83c2ijzF_
not modelled 99.4 15
PDB header:hydrolase
Chain: F: PDB Molecule:probable m18-family aminopeptidase 2;
PDBTitle: crystal structure of aminopeptidase
84c4f9vB_
not modelled 99.4 19
PDB header:transferase, hydrolase
Chain: B: PDB Molecule:cg32412;
PDBTitle: structure of c113a/c136a mutant variant of glycosylated glutaminyl2 cyclase from drosophila melanogaster
85d1tkja1
not modelled 99.3 24
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
86c1y7eA_
not modelled 99.3 13
PDB header:hydrolase
Chain: A: PDB Molecule:probable m18-family aminopeptidase 1;
PDBTitle: the crystal structure of aminopeptidase i from borrelia burgdorferi2 b31
87c3pb6X_
not modelled 99.2 25
PDB header:transferase
Chain: X: PDB Molecule:glutaminyl-peptide cyclotransferase-like protein;
PDBTitle: crystal structure of the catalytic domain of human golgi-resident2 glutaminyl cyclase at ph 6.5
88d1z2la2
not modelled 99.2 14
Fold:Ferredoxin-like
Superfamily:Bacterial exopeptidase dimerisation domain
Family:Bacterial exopeptidase dimerisation domain
89c1q7lB_
not modelled 99.2 26
PDB header:hydrolase
Chain: B: PDB Molecule:aminoacylase-1;
PDBTitle: zn-binding domain of the t347g mutant of human aminoacylase-2 i
90d1y7ea2
not modelled 99.2 14
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
91d2afwa1
not modelled 99.2 21
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Glutaminyl-peptide cyclotransferase-like
92c5gneA_
not modelled 99.1 19
PDB header:hydrolase
Chain: A: PDB Molecule:leucine aminopeptidase;
PDBTitle: crystal structure of lapb from legionella pneumophila
93d1r3na2
not modelled 99.1 20
Fold:Ferredoxin-like
Superfamily:Bacterial exopeptidase dimerisation domain
Family:Bacterial exopeptidase dimerisation domain
94c6eslB_
not modelled 99.1 17
PDB header:hydrolase
Chain: B: PDB Molecule:bacterial leucyl aminopeptidase;
PDBTitle: crystal structure of the legionella pneumoppila lapa
95d1rtqa_
not modelled 99.0 16
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
96c5jm6D_
not modelled 99.0 10
PDB header:hydrolase
Chain: D: PDB Molecule:aminopeptidase-like protein;
PDBTitle: structure of chaetomium thermophilum mape1
97d1ysja2
not modelled 98.9 22
Fold:Ferredoxin-like
Superfamily:Bacterial exopeptidase dimerisation domain
Family:Bacterial exopeptidase dimerisation domain
98c3guxA_
not modelled 98.9 17
PDB header:hydrolase
Chain: A: PDB Molecule:putative zn-dependent exopeptidase;
PDBTitle: crystal structure of a putative zn-dependent exopeptidase (bvu_1317)2 from bacteroides vulgatus atcc 8482 at 1.80 a resolution
99c2gljR_
not modelled 98.9 10
PDB header:hydrolase
Chain: R: PDB Molecule:
PDBTitle: crystal structure of aminopeptidase i from clostridium2 acetobutylicum
100d1lfwa2
not modelled 98.9 15
Fold:Ferredoxin-like
Superfamily:Bacterial exopeptidase dimerisation domain
Family:Bacterial exopeptidase dimerisation domain
101c2ek8A_
not modelled 98.8 26
PDB header:hydrolase
Chain: A: PDB Molecule:aminopeptidase;
PDBTitle: aminopeptidase from aneurinibacillus sp. strain am-1
102c3iibA_
not modelled 98.5 20
PDB header:hydrolase
Chain: A: PDB Molecule:peptidase m28;
PDBTitle: crystal structure of peptidase m28 precursor (yp_926796.1) from2 shewanella amazonensis sb2b at 1.70 a resolution
103d3bi1a3
not modelled 98.1 16
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:FolH catalytic domain-like
104d1de4c3
not modelled 97.9 20
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:FolH catalytic domain-like
105d1xmba2
not modelled 97.7 13
Fold:Ferredoxin-like
Superfamily:Bacterial exopeptidase dimerisation domain
Family:Bacterial exopeptidase dimerisation domain
106c3rbuA_
not modelled 95.5 21
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:glutamate carboxypeptidase 2;
PDBTitle: n-terminally avitev-tagged human glutamate carboxypeptidase ii in2 complex with 2-pmpa
107c2ootA_
not modelled 95.4 21
PDB header:hydrolase
Chain: A: PDB Molecule:glutamate carboxypeptidase 2;
PDBTitle: a high resolution structure of ligand-free human glutamate2 carboxypeptidase ii
108c4r12A_
not modelled 95.2 18
PDB header:protein binding
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the gamma-secretase component nicastrin
109c4tweA_
not modelled 95.2 24
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylated-alpha-linked acidic dipeptidase-like protein;
PDBTitle: structure of ligand-free n-acetylated-alpha-linked-acidic-dipeptidase2 like protein (naaladasel)
110d1fnoa3
not modelled 95.1 14
Fold:Ferredoxin-like
Superfamily:Bacterial exopeptidase dimerisation domain
Family:Bacterial exopeptidase dimerisation domain
111c5a63A_
not modelled 94.5 19
PDB header:hydrolase
Chain: A: PDB Molecule:nicastrin;
PDBTitle: cryo-em structure of the human gamma-secretase complex at 3.4 angstrom2 resolution.
112c1cx8F_
not modelled 94.0 19
PDB header:metal transport
Chain: F: PDB Molecule:transferrin receptor protein;
PDBTitle: crystal structure of the ectodomain of human transferrin receptor
113c4uisA_
not modelled 93.8 25
PDB header:hydrolase
Chain: A: PDB Molecule:gamma-secretase;
PDBTitle: the cryoem structure of human gamma-secretase complex
114c4efdF_
not modelled 91.4 18
PDB header:hydrolase
Chain: F: PDB Molecule:aminopeptidase;
PDBTitle: crystal structure of an m17 aminopeptidase from trypanosoma brucei,2 tb427tmp.02.4440
115c5ntgA_
not modelled 91.2 15
PDB header:hydrolase
Chain: A: PDB Molecule:aminopeptidase;
PDBTitle: structure of leucyl aminopeptidase from trypanosoma cruzi in complex2 with citrate
116c3peiA_
not modelled 90.7 11
PDB header:hydrolase
Chain: A: PDB Molecule:cytosol aminopeptidase;
PDBTitle: crystal structure of cytosol aminopeptidase from francisella2 tularensis
117c3kzwD_
not modelled 90.6 13
PDB header:hydrolase
Chain: D: PDB Molecule:cytosol aminopeptidase;
PDBTitle: crystal structure of cytosol aminopeptidase from staphylococcus aureus2 col
118c3ij3A_
not modelled 89.2 21
PDB header:hydrolase
Chain: A: PDB Molecule:cytosol aminopeptidase;
PDBTitle: 1.8 angstrom resolution crystal structure of cytosol aminopeptidase2 from coxiella burnetii
119c2hc9A_
not modelled 88.7 23
PDB header:hydrolase
Chain: A: PDB Molecule:leucine aminopeptidase 1;
PDBTitle: structure of caenorhabditis elegans leucine aminopeptidase-zinc2 complex (lap1)
120c3h8gC_
not modelled 87.3 17
PDB header:hydrolase
Chain: C: PDB Molecule:cytosol aminopeptidase;
PDBTitle: bestatin complex structure of leucine aminopeptidase from pseudomonas2 putida

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below