Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1205_(-)_1348725_1349288
DateWed Jul 31 22:05:29 BST 2019
Unique Job ID2dde4a84485fb0a7
SequenceMSAKIDITGD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:42.547 Y:45.906 Z:37.408
Model (left) based on template d1ydha_
Top template information
Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:MoCo carrier protein-like
Confidence and coverage
Confidence:100.0% Coverage: 96%
180 residues ( 96% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1ydha_
100.0 27
Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:MoCo carrier protein-like
2c5zbjA_
100.0 42
PDB header:hydrolase
Chain: A: PDB Molecule:putative cytokinin riboside 5'-monophosphate
PDBTitle: crystal strcuture of type-i log from pseudomonas aeruginosa pao1
3c5itsD_
100.0 33
PDB header:hydrolase
Chain: D: PDB Molecule:cytokinin riboside 5'-monophosphate phosphoribohydrolase;
PDBTitle: crystal strcuture of log from corynebacterium glutamicum
4d1t35a_
100.0 28
Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:MoCo carrier protein-like
5c2q4dB_
100.0 28
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:lysine decarboxylase-like protein at5g11950;
PDBTitle: ensemble refinement of the crystal structure of a lysine2 decarboxylase-like protein from arabidopsis thaliana gene at5g11950
6c3quaA_
100.0 73
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a putative uncharacterized protein and possible2 molybdenum cofactor protein from mycobacterium smegmatis
7c3sbxC_
100.0 83
PDB header:unknown function
Chain: C: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium marinum bound to adenosine 5'-monophosphate amp
8c5ajtA_
100.0 32
PDB header:hydrolase
Chain: A: PDB Molecule:phosphoribohydrolase lonely guy;
PDBTitle: crystal structure of ligand-free phosphoribohydrolase lonely guy from2 claviceps purpurea
9d2q4oa1
100.0 30
Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:MoCo carrier protein-like
10c2q4oA_
100.0 30
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein at2g37210/t2n18.3;
PDBTitle: ensemble refinement of the crystal structure of a lysine2 decarboxylase-like protein from arabidopsis thaliana gene at2g37210
11c5zi9B_
100.0 26
PDB header:hydrolase
Chain: B: PDB Molecule:cytokinin riboside 5'-monophosphate phosphoribohydrolase;
PDBTitle: crystal strcuture of type-ii log from streptomyces coelicolor a3
12d1weka_
100.0 26
Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:MoCo carrier protein-like
13c5wq3A_
100.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:cytokinin riboside 5'-monophosphate phosphoribohydrolase;
PDBTitle: crystal strcuture of type-ii log from corynebacterium glutamicum
14d1weha_
100.0 29
Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:MoCo carrier protein-like
15c3bq9A_
100.0 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:predicted rossmann fold nucleotide-binding domain-
PDBTitle: crystal structure of predicted nucleotide-binding protein from2 idiomarina baltica os145
16c6gfmA_
100.0 21
PDB header:hydrolase
Chain: A: PDB Molecule:pyrimidine/purine nucleotide 5'-monophosphate nucleosidase;
PDBTitle: crystal structure of the escherichia coli nucleosidase ppnn (pppgpp-2 form)
17c3gh1A_
100.0 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:predicted nucleotide-binding protein;
PDBTitle: crystal structure of predicted nucleotide-binding protein from vibrio2 cholerae
18c1rcuB_
100.0 22
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:conserved hypothetical protein vt76;
PDBTitle: x-ray structure of tm1055 northeast structural genomics2 consortium target vt76
19d1rcua_
100.0 22
Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:MoCo carrier protein-like
20c2iz6A_
100.0 28
PDB header:metal transport
Chain: A: PDB Molecule:molybdenum cofactor carrier protein;
PDBTitle: structure of the chlamydomonas rheinhardtii moco carrier2 protein
21c3uqzB_
not modelled 99.6 20
PDB header:dna binding protein
Chain: B: PDB Molecule:dna processing protein dpra;
PDBTitle: x-ray structure of dna processing protein a (dpra) from streptococcus2 pneumoniae
22c3majA_
not modelled 99.6 17
PDB header:dna binding protein
Chain: A: PDB Molecule:dna processing chain a;
PDBTitle: crystal structure of putative dna processing protein dpra from2 rhodopseudomonas palustris cga009
23c4ljkA_
not modelled 99.6 18
PDB header:dna binding protein
Chain: A: PDB Molecule:dna processing chain a (dpra);
PDBTitle: structural insights into the unique single-stranded dna binding mode2 of dna processing protein a from helicobacter pylori
24d2nx2a1
not modelled 98.5 17
Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:YpsA-like
25c6d73C_
not modelled 97.4 24
PDB header:transport protein
Chain: C: PDB Molecule:transient receptor potential cation channel, subfamily m;
PDBTitle: cryo-em structure of the zebrafish trpm2 channel in the presence of2 ca2+
26c6mizC_
not modelled 97.4 25
PDB header:membrane protein
Chain: C: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: human trpm2 ion channel in an adpr-bound state
27c6d73B_
not modelled 97.2 24
PDB header:transport protein
Chain: B: PDB Molecule:transient receptor potential cation channel, subfamily m;
PDBTitle: cryo-em structure of the zebrafish trpm2 channel in the presence of2 ca2+
28c6co7C_
not modelled 97.2 23
PDB header:membrane protein
Chain: C: PDB Molecule:predicted protein;
PDBTitle: structure of the nvtrpm2 channel in complex with ca2+
29c6bcqB_
not modelled 96.9 24
PDB header:transport protein
Chain: B: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: cryo-em structure of trpm4 in atp bound state with long coiled coil at2 3.3 angstrom resolution
30c6bcoD_
not modelled 96.9 24
PDB header:transport protein
Chain: D: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: cryo-em structure of trpm4 in atp bound state with short coiled coil2 at 2.9 angstrom resolution
31c6drkD_
not modelled 96.7 25
PDB header:transport protein
Chain: D: PDB Molecule:transient receptor potential cation channel, subfamily m,
PDBTitle: structure of trpm2 ion channel receptor by single particle electron2 cryo-microscopy, apo state
32c3imkA_
not modelled 96.5 16
PDB header:metal binding protein
Chain: A: PDB Molecule:putative molybdenum carrier protein;
PDBTitle: crystal structure of putative molybdenum carrier protein (yp_461806.1)2 from syntrophus aciditrophicus sb at 1.45 a resolution
33c6nr3D_
not modelled 93.4 16
PDB header:transport protein
Chain: D: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: cryo-em structure of the trpm8 ion channel in complex with high2 occupancy icilin, pi(4,5)p2, and calcium
34c6nr3C_
not modelled 93.4 16
PDB header:transport protein
Chain: C: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: cryo-em structure of the trpm8 ion channel in complex with high2 occupancy icilin, pi(4,5)p2, and calcium
35c6nr3B_
not modelled 93.4 16
PDB header:transport protein
Chain: B: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: cryo-em structure of the trpm8 ion channel in complex with high2 occupancy icilin, pi(4,5)p2, and calcium
36c6nr3A_
not modelled 93.4 16
PDB header:transport protein
Chain: A: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: cryo-em structure of the trpm8 ion channel in complex with high2 occupancy icilin, pi(4,5)p2, and calcium
37c5vtoA_
not modelled 93.4 27
PDB header:hydrolase
Chain: A: PDB Molecule:blasticidin m;
PDBTitle: solution structure of blsm
38c4jenB_
not modelled 93.2 20
PDB header:hydrolase
Chain: B: PDB Molecule:cmp n-glycosidase;
PDBTitle: structure of clostridium botulinum cmp n-glycosidase, bcmb
39c6evsA_
not modelled 92.4 17
PDB header:transferase
Chain: A: PDB Molecule:n-deoxyribosyltransferase;
PDBTitle: characterization of 2-deoxyribosyltransferase from psychrotolerant2 bacterium bacillus psychrosaccharolyticus: a suitable biocatalyst for3 the industrial synthesis of antiviral and antitumoral nucleosides
40c2khzB_
not modelled 92.2 19
PDB header:nuclear protein
Chain: B: PDB Molecule:c-myc-responsive protein rcl;
PDBTitle: solution structure of rcl
41c6nr2B_
not modelled 91.8 19
PDB header:transport protein
Chain: B: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: cryo-em structure of the trpm8 ion channel in complex with the menthol2 analog ws-12 and pi(4,5)p2
42c6nr2C_
not modelled 91.8 19
PDB header:transport protein
Chain: C: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: cryo-em structure of the trpm8 ion channel in complex with the menthol2 analog ws-12 and pi(4,5)p2
43c6nr2D_
not modelled 91.8 19
PDB header:transport protein
Chain: D: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: cryo-em structure of the trpm8 ion channel in complex with the menthol2 analog ws-12 and pi(4,5)p2
44c6nr2A_
not modelled 91.8 19
PDB header:transport protein
Chain: A: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: cryo-em structure of the trpm8 ion channel in complex with the menthol2 analog ws-12 and pi(4,5)p2
45d2nu7b1
not modelled 91.3 18
Fold:Flavodoxin-like
Superfamily:Succinyl-CoA synthetase domains
Family:Succinyl-CoA synthetase domains
46c5nbrB_
not modelled 88.7 18
PDB header:transferase
Chain: B: PDB Molecule:deoxyribosyltransferase;
PDBTitle: 2-desoxiribosyltransferase from leishmania mexicana
47c3bgkA_
not modelled 88.0 19
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the crystal structure of hypothetic protein smu.573 from streptococcus2 mutans
48c2r3bA_
not modelled 87.6 17
PDB header:transferase
Chain: A: PDB Molecule:yjef-related protein;
PDBTitle: crystal structure of a ribokinase-like superfamily protein (ef1790)2 from enterococcus faecalis v583 at 1.80 a resolution
49c4jemA_
not modelled 86.5 17
PDB header:hydrolase
Chain: A: PDB Molecule:cmp/hydroxymethyl cmp hydrolase;
PDBTitle: crystal structure of milb complexed with cytidine 5'-monophosphate
50c3zlbA_
not modelled 81.2 17
PDB header:transferase
Chain: A: PDB Molecule:phosphoglycerate kinase;
PDBTitle: crystal structure of phosphoglycerate kinase from streptococcus2 pneumoniae
51c4qjiB_
not modelled 79.1 16
PDB header:ligase
Chain: B: PDB Molecule:phosphopantothenate--cysteine ligase;
PDBTitle: crystal structure of the c-terminal ctp-binding domain of a2 phosphopantothenoylcysteine decarboxylase/phosphopantothenate-3 cysteine ligase with bound ctp from mycobacterium smegmatis
52d1f8ya_
not modelled 77.4 23
Fold:Flavodoxin-like
Superfamily:N-(deoxy)ribosyltransferase-like
Family:N-deoxyribosyltransferase
53d1u0ta_
not modelled 76.3 23
Fold:NAD kinase/diacylglycerol kinase-like
Superfamily:NAD kinase/diacylglycerol kinase-like
Family:NAD kinase-like
54c2jzcA_
not modelled 75.6 12
PDB header:transferase
Chain: A: PDB Molecule:udp-n-acetylglucosamine transferase subunit
PDBTitle: nmr solution structure of alg13: the sugar donor subunit of2 a yeast n-acetylglucosamine transferase. northeast3 structural genomics consortium target yg1
55c2bonB_
not modelled 74.6 26
PDB header:transferase
Chain: B: PDB Molecule:lipid kinase;
PDBTitle: structure of an escherichia coli lipid kinase (yegs)
56c1zrsB_
not modelled 72.3 25
PDB header:hydrolase
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: wild-type ld-carboxypeptidase
57c1zmrA_
not modelled 72.3 18
PDB header:transferase
Chain: A: PDB Molecule:phosphoglycerate kinase;
PDBTitle: crystal structure of the e. coli phosphoglycerate kinase
58c6efwA_
not modelled 72.2 19
PDB header:lyase
Chain: A: PDB Molecule:atp-dependent (s)-nad(p)h-hydrate dehydratase;
PDBTitle: crystal structure of a yjef family protein from cryptococcus2 neoformans var. grubii serotype a
59d2auna2
not modelled 72.1 29
Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:LD-carboxypeptidase A N-terminal domain-like
60d1phpa_
not modelled 67.3 18
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
61c3q3vA_
not modelled 66.8 15
PDB header:transferase
Chain: A: PDB Molecule:phosphoglycerate kinase;
PDBTitle: crystal structure of phosphoglycerate kinase from campylobacter2 jejuni.
62d1yoba1
not modelled 65.4 24
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
63c3ehdA_
not modelled 63.6 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized conserved protein;
PDBTitle: crystal structure of conserved protein from enterococcus faecalis v583
64c4ng4B_
not modelled 60.0 16
PDB header:transferase
Chain: B: PDB Molecule:phosphoglycerate kinase;
PDBTitle: structure of phosphoglycerate kinase (cbu_1782) from coxiella burnetii
65c3s40C_
not modelled 57.2 24
PDB header:transferase
Chain: C: PDB Molecule:diacylglycerol kinase;
PDBTitle: the crystal structure of a diacylglycerol kinases from bacillus2 anthracis str. sterne
66c2qv7A_
not modelled 57.0 17
PDB header:transferase
Chain: A: PDB Molecule:diacylglycerol kinase dgkb;
PDBTitle: crystal structure of diacylglycerol kinase dgkb in complex with adp2 and mg
67c4as2D_
not modelled 55.9 25
PDB header:hydrolase
Chain: D: PDB Molecule:phosphorylcholine phosphatase;
PDBTitle: pseudomonas aeruginosa phosphorylcholine phosphatase. monoclinic form
68d2jgra1
not modelled 54.1 26
Fold:NAD kinase/diacylglycerol kinase-like
Superfamily:NAD kinase/diacylglycerol kinase-like
Family:Diacylglycerol kinase-like
69d2bona1
not modelled 53.7 26
Fold:NAD kinase/diacylglycerol kinase-like
Superfamily:NAD kinase/diacylglycerol kinase-like
Family:Diacylglycerol kinase-like
70d1v6sa_
not modelled 52.4 13
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
71c3d3jA_
not modelled 51.2 17
PDB header:protein binding
Chain: A: PDB Molecule:enhancer of mrna-decapping protein 3;
PDBTitle: crystal structure of human edc3p
72d1s2da_
not modelled 51.2 10
Fold:Flavodoxin-like
Superfamily:N-(deoxy)ribosyltransferase-like
Family:N-deoxyribosyltransferase
73c4e5sC_
not modelled 51.1 14
PDB header:hydrolase
Chain: C: PDB Molecule:mccflike protein (ba_5613);
PDBTitle: crystal structure of mccflike protein (ba_5613) from bacillus2 anthracis str. ames
74d1e4ea1
not modelled 50.5 22
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:D-Alanine ligase N-terminal domain
75d1fw8a_
not modelled 50.1 19
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
76d2f62a1
not modelled 49.7 20
Fold:Flavodoxin-like
Superfamily:N-(deoxy)ribosyltransferase-like
Family:N-deoxyribosyltransferase
77c4dg5A_
not modelled 48.7 15
PDB header:transferase
Chain: A: PDB Molecule:phosphoglycerate kinase;
PDBTitle: crystal structure of staphylococcal phosphoglycerate kinase
78c4h1hB_
not modelled 47.3 15
PDB header:hydrolase
Chain: B: PDB Molecule:lmo1638 protein;
PDBTitle: crystal structure of mccf homolog from listeria monocytogenes egd-e
79d1iowa1
not modelled 45.1 22
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:D-Alanine ligase N-terminal domain
80c6fsiA_
not modelled 45.0 12
PDB header:electron transport
Chain: A: PDB Molecule:flavodoxin;
PDBTitle: crystal structure of semiquinone flavodoxin 1 from bacillus cereus2 (1.32 a resolution)
81c6bpqD_
not modelled 44.8 11
PDB header:transport protein
Chain: D: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: structure of the cold- and menthol-sensing ion channel trpm8
82c6bpqB_
not modelled 44.8 11
PDB header:transport protein
Chain: B: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: structure of the cold- and menthol-sensing ion channel trpm8
83c6bpqC_
not modelled 44.8 11
PDB header:transport protein
Chain: C: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: structure of the cold- and menthol-sensing ion channel trpm8
84c6bpqA_
not modelled 44.8 11
PDB header:transport protein
Chain: A: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: structure of the cold- and menthol-sensing ion channel trpm8
85c3d3kD_
not modelled 44.8 18
PDB header:protein binding
Chain: D: PDB Molecule:enhancer of mrna-decapping protein 3;
PDBTitle: crystal structure of human edc3p
86c5f2kA_
not modelled 44.7 31
PDB header:transferase
Chain: A: PDB Molecule:fatty acid o-methyltransferase;
PDBTitle: crystal structure of mycobacterial fatty acid o-methyltransferase in2 complex with sah and octanoate
87c2wc1A_
not modelled 43.5 19
PDB header:electron transport
Chain: A: PDB Molecule:flavodoxin;
PDBTitle: three-dimensional structure of the nitrogen fixation2 flavodoxin (niff) from rhodobacter capsulatus at 2.2 a
88c3c5yD_
not modelled 43.0 13
PDB header:isomerase
Chain: D: PDB Molecule:ribose/galactose isomerase;
PDBTitle: crystal structure of a putative ribose 5-phosphate isomerase2 (saro_3514) from novosphingobium aromaticivorans dsm at 1.81 a3 resolution
89d1qpga_
not modelled 42.6 19
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
90d2p1ra1
not modelled 42.3 21
Fold:NAD kinase/diacylglycerol kinase-like
Superfamily:NAD kinase/diacylglycerol kinase-like
Family:Diacylglycerol kinase-like
91c2dg2D_
not modelled 42.2 17
PDB header:protein binding
Chain: D: PDB Molecule:apolipoprotein a-i binding protein;
PDBTitle: crystal structure of mouse apolipoprotein a-i binding protein
92d1hdia_
not modelled 41.2 15
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
93d1ehia1
not modelled 41.1 23
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:D-Alanine ligase N-terminal domain
94c2i80B_
not modelled 40.8 19
PDB header:ligase
Chain: B: PDB Molecule:d-alanine-d-alanine ligase;
PDBTitle: allosteric inhibition of staphylococcus aureus d-alanine:d-alanine2 ligase revealed by crystallographic studies
95c5ohxB_
not modelled 40.7 17
PDB header:lyase
Chain: B: PDB Molecule:cystathionine beta-synthase;
PDBTitle: structure of active cystathionine b-synthase from apis mellifera
96d2qv7a1
not modelled 39.5 15
Fold:NAD kinase/diacylglycerol kinase-like
Superfamily:NAD kinase/diacylglycerol kinase-like
Family:Diacylglycerol kinase-like
97c2duwA_
not modelled 39.4 13
PDB header:ligand binding protein
Chain: A: PDB Molecule:putative coa-binding protein;
PDBTitle: solution structure of putative coa-binding protein of2 klebsiella pneumoniae
98c5b3kA_
not modelled 39.3 19
PDB header:electron transport
Chain: A: PDB Molecule:uncharacterized protein pa3435;
PDBTitle: c101a mutant of flavodoxin from pseudomonas aeruginosa
99c3gndC_
not modelled 38.8 15
PDB header:lyase
Chain: C: PDB Molecule:aldolase lsrf;
PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate
100d1u7za_
not modelled 38.6 16
Fold:Ribokinase-like
Superfamily:CoaB-like
Family:CoaB-like
101c4ei8A_
not modelled 38.3 8
PDB header:replication
Chain: A: PDB Molecule:plasmid replication protein repx;
PDBTitle: crystal structure of bacillus cereus tubz, apo-form
102c4nguA_
not modelled 38.3 6
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio alaskensis g20 (dde_1548), target efi-510103, with3 bound d-ala-d-ala
103c3hy5A_
not modelled 37.6 12
PDB header:transport protein
Chain: A: PDB Molecule:retinaldehyde-binding protein 1;
PDBTitle: crystal structure of cralbp
104c5dmxC_
not modelled 37.0 24
PDB header:ligase
Chain: C: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase from acinetobacter2 baumannii, space group p212121
105d1ag9a_
not modelled 36.9 27
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
106c3k3pA_
not modelled 36.2 19
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of the apo form of d-alanine:d-alanine ligase (ddl)2 from streptococcus mutans
107c4fu0B_
not modelled 35.8 19
PDB header:ligase
Chain: B: PDB Molecule:d-alanine--d-alanine ligase 7;
PDBTitle: crystal structure of vang d-ala:d-ser ligase from enterococcus2 faecalis
108c4imrA_
not modelled 34.7 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:3-oxoacyl-(acyl-carrier-protein) reductase;
PDBTitle: crystal structure of 3-oxoacyl (acyl-carrier-protein) reductase2 (target efi-506442) from agrobacterium tumefaciens c58 with nadp3 bound
109c6odmC_
not modelled 34.6 36
PDB header:viral protein
Chain: C: PDB Molecule:capsid vertex component 1;
PDBTitle: herpes simplex virus type 1 (hsv-1) portal vertex-adjacent2 capsid/catc, asymmetric unit
110c4heqB_
not modelled 34.4 9
PDB header:electron transport
Chain: B: PDB Molecule:flavodoxin;
PDBTitle: the crystal structure of flavodoxin from desulfovibrio gigas
111d1m6ex_
not modelled 34.2 12
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Salicylic acid carboxyl methyltransferase (SAMT)
112d2fcra_
not modelled 34.1 19
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
113d1ja1a2
not modelled 33.9 15
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Cytochrome p450 reductase N-terminal domain-like
114c3imfA_
not modelled 33.9 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:short chain dehydrogenase;
PDBTitle: 1.99 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor'
115c3tlgB_
not modelled 33.6 23
PDB header:hydrolase
Chain: B: PDB Molecule:mccf;
PDBTitle: microcin c7 self immunity protein mccf in the inactive mutant apo2 state
116c6c8rA_
not modelled 33.4 15
PDB header:transferase
Chain: A: PDB Molecule:loganic acid o-methyltransferase;
PDBTitle: loganic acid o-methyltransferase complexed with sah and loganic acid
117c3qjgD_
not modelled 33.4 17
PDB header:oxidoreductase
Chain: D: PDB Molecule:epidermin biosynthesis protein epid;
PDBTitle: epidermin biosynthesis protein epid from staphylococcus aureus
118d16pka_
not modelled 32.9 16
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
119d1vmea1
not modelled 32.8 14
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
120c3nywD_
not modelled 32.8 16
PDB header:oxidoreductase
Chain: D: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of a betaketoacyl-[acp] reductase (fabg) from2 bacteroides thetaiotaomicron

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite