Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1226c_(-)_1368838_1370301
DateWed Jul 31 22:05:31 BST 2019
Unique Job ID14a554a0b75ae8a4
SequenceMTDRPHDWHR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:33.642 Y:35.803 Z:38.401
Model (left) based on template d2gcla1
Top template information
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:SSRP1-like
Confidence and coverage
Confidence: 83.0% Coverage: 13%
62 residues ( 13% of your sequence) have been modelled with 83.0% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2gcla1



83.0 15
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:SSRP1-like
2d3dcxa1



71.0 20
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:BPHL domain
3c3fssA_



66.5 11
PDB header:chaperone
Chain: A: PDB Molecule:histone chaperone rtt106;
PDBTitle: structure of the tandem ph domains of rtt106
4c4tyzB_



66.1 13
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the c-terminal domain of an unknown protein from2 leishmania infantum
5c3gypA_



37.2 11
PDB header:chaperone
Chain: A: PDB Molecule:histone chaperone rtt106;
PDBTitle: rtt106p
6c4khbF_



17.3 13
PDB header:transcription/replication
Chain: F: PDB Molecule:uncharacterized protein pob3n;
PDBTitle: structure of the spt16d pob3n heterodimer
7d1ujpa_



13.5 24
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Tryptophan biosynthesis enzymes
8c5tchG_



12.8 24
PDB header:lyase
Chain: G: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase from m. tuberculosis -2 ligand-free form, trpa-g66v mutant
9c5k9xA_



9.7 30
PDB header:lyase
Chain: A: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase alpha chain from legionella2 pneumophila subsp. pneumophila
10c1lqvD_



8.8 60
PDB header:blood clotting
Chain: D: PDB Molecule:vitamin-k dependent protein c;
PDBTitle: crystal structure of the endothelial protein c receptor with2 phospholipid in the groove in complex with gla domain of protein c.
11c3jtcD_



8.8 60
PDB header:blood clotting
Chain: D: PDB Molecule:vitamin k-dependent protein c;
PDBTitle: importance of mg2+ in the ca2+-dependent folding of the gamma-2 carboxyglutamic acid domains of vitamin k-dependent clotting and3 anticlotting proteins
12c3jtcC_



8.8 60
PDB header:blood clotting
Chain: C: PDB Molecule:vitamin k-dependent protein c;
PDBTitle: importance of mg2+ in the ca2+-dependent folding of the gamma-2 carboxyglutamic acid domains of vitamin k-dependent clotting and3 anticlotting proteins
13c1lqvC_



8.8 60
PDB header:blood clotting
Chain: C: PDB Molecule:vitamin-k dependent protein c;
PDBTitle: crystal structure of the endothelial protein c receptor with2 phospholipid in the groove in complex with gla domain of protein c.
14c5umrA_



8.1 10
PDB header:transcription
Chain: A: PDB Molecule:fact complex subunit ssrp1;
PDBTitle: crystal structure of n-terminal domain of human fact complex subunit2 ssrp1
15c5yqrA_



7.8 12
PDB header:transport protein
Chain: A: PDB Molecule:endolysin/membrane-anchored lipid-binding protein lam6
PDBTitle: crystal structure of the ph-like domain of lam6
16c5x3xq_



7.8 21
PDB header:transport protein
Chain: Q: PDB Molecule:uncharacterized protein cbiq;
PDBTitle: 2.8a resolution structure of a cobalt energy-coupling factor2 transporter-cbimqo
17d1zj8a1



7.5 22
Fold:Ferredoxin-like
Superfamily:Nitrite/Sulfite reductase N-terminal domain-like
Family:Duplicated SiR/NiR-like domains 1 and 3
18c5uz9K_



7.3 38
PDB header:immune system/rna
Chain: K: PDB Molecule:anti-crispr protein 30;
PDBTitle: cryo em structure of anti-crisprs, acrf1 and acrf2, bound to type i-f2 crrna-guided crispr surveillance complex
19d3b77a1



6.6 4
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:BPHL domain
20c3f5rA_



6.5 17
PDB header:transcription regulator
Chain: A: PDB Molecule:fact complex subunit pob3;
PDBTitle: the crystal structure of a subunit of the heterodimeric fact complex2 (spt16p-pob3p).
21d2fbla1



not modelled 6.3 7
Fold:CYTH-like phosphatases
Superfamily:CYTH-like phosphatases
Family:CYTH domain
22d2q09a1



not modelled 6.2 20
Fold:Composite domain of metallo-dependent hydrolases
Superfamily:Composite domain of metallo-dependent hydrolases
Family:Imidazolonepropionase-like
23c3aqoD_



not modelled 6.2 20
PDB header:membrane protein
Chain: D: PDB Molecule:probable secdf protein-export membrane protein;
PDBTitle: structure and function of a membrane component secdf that enhances2 protein export
24d2hthb1



not modelled 6.1 10
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:VPS36 N-terminal domain-like
25c5nocA_



not modelled 5.9 14
PDB header:dna binding protein
Chain: A: PDB Molecule:stage 0 sporulation protein j;
PDBTitle: solution nmr structure of the c-terminal domain of parb (spo0j)
26c4z3uC_



not modelled 5.7 7
PDB header:viral protein
Chain: C: PDB Molecule:ul34 protein;
PDBTitle: prv nuclear egress complex
27c4e1pA_



not modelled 5.5 23
PDB header:dna binding protein
Chain: A: PDB Molecule:protein lsr2;
PDBTitle: crystal structure of the dimerization domain of lsr2 from2 mycobacterium tuberculosis in the p 1 21 1 space group
28c4e1rA_



not modelled 5.5 23
PDB header:dna binding protein
Chain: A: PDB Molecule:protein lsr2;
PDBTitle: crystal structure of the dimerization domain of lsr2 from2 mycobacterium tuberculosis in the p 31 2 1 space group
29d1jrma_



not modelled 5.1 6
Fold:YggU-like
Superfamily:YggU-like
Family:YggU-like

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below