Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1234_(-)_1376982_1377509
DateWed Jul 31 22:05:32 BST 2019
Unique Job ID5adacdc59696199d
SequenceMTSPFQPRQV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:54.962 Y:37.211 Z:69.032
Model (left) based on template c6btmD_
Top template information
PDB header:membrane protein
Chain: D: PDB Molecule:alternative complex iii subunit d;
PDBTitle: structure of alternative complex iii from flavobacterium johnsoniae2 (wild type)
Confidence and coverage
Confidence: 97.8% Coverage: 80%
140 residues ( 80% of your sequence) have been modelled with 97.8% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6btmD_
97.8 8
PDB header:membrane protein
Chain: D: PDB Molecule:alternative complex iii subunit d;
PDBTitle: structure of alternative complex iii from flavobacterium johnsoniae2 (wild type)
2c6f0kD_
96.9 11
PDB header:membrane protein
Chain: D: PDB Molecule:actd;
PDBTitle: alternative complex iii
3c1x60A_
83.8 13
PDB header:hydrolase
Chain: A: PDB Molecule:sporulation-specific n-acetylmuramoyl-l-alanine
PDBTitle: solution structure of the peptidoglycan binding domain of2 b. subtilis cell wall lytic enzyme cwlc
4d1utaa_
76.2 22
Fold:Ferredoxin-like
Superfamily:Sporulation related repeat
Family:Sporulation related repeat
5d1wi6a1
67.6 11
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
6c2kxnB_
64.9 8
PDB header:rna binding protein/rna
Chain: B: PDB Molecule:transformer-2 protein homolog beta;
PDBTitle: nmr structure of human tra2beta1 rrm in complex with aagaac rna
7c2jvrA_
61.1 16
PDB header:rna binding protein
Chain: A: PDB Molecule:nucleolar protein 3;
PDBTitle: segmental isotope labeling of npl3p
8c3ffjA_
60.6 19
PDB header:hydrolase
Chain: A: PDB Molecule:glycosyl hydrolase (family 31);
PDBTitle: the crystal structure of the glycosyl hydrolase (family 31) from2 ruminococcus obeum atcc 29174
9c6iu3A_
60.2 14
PDB header:metal transport
Chain: A: PDB Molecule:vit1;
PDBTitle: crystal structure of iron transporter vit1 with zinc ions
10c3begB_
59.9 17
PDB header:transferase/splicing
Chain: B: PDB Molecule:splicing factor, arginine/serine-rich 1;
PDBTitle: crystal structure of sr protein kinase 1 complexed to its substrate2 asf/sf2
11c2dgxA_
59.8 17
PDB header:rna binding protein
Chain: A: PDB Molecule:kiaa0430 protein;
PDBTitle: solution structure of the rna recognition motif in kiaa04302 protein
12c2mheB_
59.6 32
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: nmr structure of the protein np_419126.1 from caulobacter crescentus
13d1ifya_
58.7 12
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
14d3begb1
58.4 17
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
15d1wg1a_
57.2 15
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
16c2osrA_
56.1 16
PDB header:rna binding protein
Chain: A: PDB Molecule:nucleolar protein 3;
PDBTitle: nmr structure of rrm-2 of yeast npl3 protein
17d2ghpa1
56.1 11
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
18d1whxa_
55.3 14
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
19d1sjqa_
53.7 18
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
20c2dnqA_
53.0 11
PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding protein 4b;
PDBTitle: solution structure of rna binding domain 1 in rna-binding2 protein 30
21c3bs9A_
not modelled 52.9 19
PDB header:rna binding protein
Chain: A: PDB Molecule:nucleolysin tia-1 isoform p40;
PDBTitle: x-ray structure of human tia-1 rrm2
22c2lepA_
not modelled 52.7 32
PDB header:hydrolase
Chain: A: PDB Molecule:rhomboid protease glpg 1;
PDBTitle: solution structure of n-terminal cytosolic domain of rhomboid2 intramembrane protease from escherichia coli
23c2hvzA_
not modelled 50.5 18
PDB header:rna binding protein
Chain: A: PDB Molecule:splicing factor, arginine/serine-rich 7;
PDBTitle: solution structure of the rrm domain of sr rich factor 9g8
24c4b9zA_
not modelled 50.3 30
PDB header:hydrolase
Chain: A: PDB Molecule:alpha-glucosidase, putative, adg31b;
PDBTitle: crystal structure of agd31b, alpha-transglucosylase,2 complexed with acarbose
25d1h6kx_
not modelled 50.0 16
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
26c4c7qA_
not modelled 49.8 11
PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding glycine-rich protein;
PDBTitle: solution structure of the nt. gr-rbp1 rrm domain
27c6druB_
not modelled 49.3 22
PDB header:hydrolase
Chain: B: PDB Molecule:glycosyl hydrolases family 31 family protein;
PDBTitle: xylosidase from aspergillus niger
28c3ns5B_
not modelled 49.2 9
PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit b;
PDBTitle: crystal structure of the rna recognition motif of yeast eif3b residues2 76-161
29c2rvjA_
not modelled 48.6 13
PDB header:transcription
Chain: A: PDB Molecule:epithelial splicing regulatory protein 1;
PDBTitle: nmr structure of epithelial splicing regulatory protein 1
30c2e44A_
not modelled 48.0 16
PDB header:rna binding protein
Chain: A: PDB Molecule:insulin-like growth factor 2 mrna binding
PDBTitle: solution structure of rna binding domain in insulin-like2 growth factor 2 mrna binding protein 3
31c1ciiA_
not modelled 47.9 16
PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia
32d1no8a_
not modelled 47.7 14
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
33c1no8A_
not modelled 47.7 14
PDB header:rna binding protein
Chain: A: PDB Molecule:aly;
PDBTitle: solution structure of the nuclear factor aly rbd domain
34c2dgtA_
not modelled 47.1 15
PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding protein 30;
PDBTitle: solution structure of the second rna binding domain in rna-2 binding protein 30
35d1fxla2
not modelled 46.9 19
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
36c2ku7A_
not modelled 46.8 14
PDB header:transcription
Chain: A: PDB Molecule:mll1 phd3-cyp33 rrm chimeric protein;
PDBTitle: solution structure of mll1 phd3-cyp33 rrm chimeric protein
37c2nlwA_
not modelled 46.4 21
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 3
PDBTitle: solution structure of the rrm domain of human eukaryotic2 initiation factor 3b
38c5m8iA_
not modelled 46.3 19
PDB header:rna binding protein
Chain: A: PDB Molecule:cugbp elav-like family member 2;
PDBTitle: solution structure of cug-bp2 rrm3 in complex with 5'-uuuaa-3' rna
39d2cqpa1
not modelled 46.3 22
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
40d1x4ea1
not modelled 46.1 23
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
41c3ex7B_
not modelled 45.8 33
PDB header:hydrolase/rna binding protein/rna
Chain: B: PDB Molecule:rna-binding protein 8a;
PDBTitle: the crystal structure of ejc in its transition state
42d1b7fa2
not modelled 45.6 26
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
43c5x3kA_
not modelled 45.4 24
PDB header:hydrolase
Chain: A: PDB Molecule:glycoside hydrolase family 31;
PDBTitle: kfla1895 d451a mutant in complex with isomaltose
44c6e4pF_
not modelled 44.8 21
PDB header:rna binding protein/rna
Chain: F: PDB Molecule:rna-binding protein, putative;
PDBTitle: structure of the t. brucei rrm domain in complex with rna
45d2pjua1
not modelled 44.7 23
Fold:Chelatase-like
Superfamily:PrpR receptor domain-like
Family:PrpR receptor domain-like
46d2cpea1
not modelled 44.6 25
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
47d2disa1
not modelled 44.3 18
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
48c4a8xA_
not modelled 44.3 24
PDB header:transcription
Chain: A: PDB Molecule:rna-binding protein with serine-rich domain 1;
PDBTitle: structure of the core asap complex
49c2e5jA_
not modelled 43.9 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:methenyltetrahydrofolate synthetase domain
PDBTitle: solution structure of rna binding domain in2 methenyltetrahydrofolate synthetase domain containing
50c5jouA_
not modelled 43.9 22
PDB header:hydrolase
Chain: A: PDB Molecule:alpha-xylosidase bogh31a;
PDBTitle: bacteroides ovatus xyloglucan pul gh31
51c3tl8K_
not modelled 43.9 24
PDB header:transferase/ligase
Chain: K: PDB Molecule:effector protein hopab2;
PDBTitle: the avrptob-bak1 complex reveals two structurally similar2 kinaseinteracting domains in a single type iii effector
52c2g3nA_
not modelled 43.8 32
PDB header:hydrolase
Chain: A: PDB Molecule:alpha-glucosidase;
PDBTitle: crystal structure of the sulfolobus solfataricus alpha-2 glucosidase mala in complex with beta-octyl-glucopyranoside
53d1x4da1
not modelled 43.8 25
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
54d1fxla1
not modelled 43.8 14
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
55c2d9oA_
not modelled 43.3 25
PDB header:rna binding protein
Chain: A: PDB Molecule:dnaj (hsp40) homolog, subfamily c, member 17;
PDBTitle: solution structure of rna binding domain in hypothetical2 protein flj10634
56c1rkjA_
not modelled 42.5 14
PDB header:transcription/rna
Chain: A: PDB Molecule:nucleolin;
PDBTitle: solution structure of the complex formed by the two n-2 terminal rna-binding domains of nucleolin and a pre-rrna3 target
57d1hl6a_
not modelled 42.4 20
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
58c6r5kH_
not modelled 41.4 19
PDB header:rna binding protein
Chain: H: PDB Molecule:polyadenylate-binding protein, cytoplasmic and nuclear;
PDBTitle: cryo-em structure of a poly(a) rnp bound to the pan2-pan3 deadenylase
59c5iegA_
not modelled 41.2 14
PDB header:hydrolase
Chain: A: PDB Molecule:neutral alpha-glucosidase ab;
PDBTitle: murine endoplasmic reticulum alpha-glucosidase ii with n-9'-2 methoxynonyl-1-deoxynojirimycin
60d1fnxh1
not modelled 41.1 14
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
61c3md3A_
not modelled 41.0 22
PDB header:rna binding protein
Chain: A: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein
PDBTitle: crystal structure of the first two rrm domains of yeast poly(u)2 binding protein (pub1)
62c2lmiA_
not modelled 41.0 12
PDB header:rna binding protein
Chain: A: PDB Molecule:g-rich sequence factor 1;
PDBTitle: nmr structure of the protein bc040485 from homo sapiens
63c3cw18_
not modelled 40.9 14
PDB header:splicing
Chain: 8: PDB Molecule:u1 small nuclear ribonucleoprotein 70 kda;
PDB Fragment:nucleotides 57-82 absent, replaced with kissing loop; PDBTitle: crystal structure of human spliceosomal u1 snrnp
64d1x4aa1
not modelled 40.7 8
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
65c2lf3A_
not modelled 40.3 19
PDB header:signaling protein
Chain: A: PDB Molecule:effector protein hopab3;
PDBTitle: solution nmr structure of hoppmal_281_385 from pseudomonas syringae2 pv. maculicola str. es4326, midwest center for structural genomics3 target apc40104.5 and northeast structural genomics consortium target4 pst2a
66c2n3oA_
not modelled 40.3 18
PDB header:rna binding protein/rna
Chain: A: PDB Molecule:polypyrimidine tract-binding protein 1;
PDBTitle: structure of ptb rrm1(41-163) bound to an rna stemloop containing a2 structured loop derived from viral internal ribosomal entry site rna
67c2do0A_
not modelled 40.1 14
PDB header:rna binding protein
Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m;
PDBTitle: solution structure of the rna binding domain of2 heterogeneous nuclear ribonucleoprotein m
68d2bz2a1
not modelled 39.8 26
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
69c4awaA_
not modelled 39.8 23
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:legumain;
PDBTitle: crystal structure of active legumain in complex with yvad-cmk2 at ph 5.0
70c2lfvA_
not modelled 39.7 30
PDB header:cell cycle
Chain: A: PDB Molecule:protein damx;
PDBTitle: solution structure of the spor domain from e. coli damx
71c2dnmA_
not modelled 39.6 14
PDB header:rna binding protein
Chain: A: PDB Molecule:srp46 splicing factor;
PDBTitle: solution structure of rna binding domain in srp46 splicing2 factor
72c5f7cC_
not modelled 39.4 24
PDB header:hydrolase
Chain: C: PDB Molecule:alpha-glucosidase;
PDBTitle: crystal structure of family 31 alpha-glucosidase (bt_0339) from2 bacteroides thetaiotaomicron
73c2adcA_
not modelled 39.3 11
PDB header:rna binding protein/rna
Chain: A: PDB Molecule:polypyrimidine tract-binding protein 1;
PDBTitle: solution structure of polypyrimidine tract binding protein2 rbd34 complexed with cucucu rna
74c3h2uD_
not modelled 39.2 19
PDB header:cell adhesion
Chain: D: PDB Molecule:raver-1;
PDBTitle: human raver1 rrm1, rrm2, and rrm3 domains in complex with2 human vinculin tail domain vt
75d2cqia1
not modelled 39.1 11
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
76c5uscB_
not modelled 39.1 14
PDB header:hydrolase
Chain: B: PDB Molecule:prephenate dehydrogenase;
PDBTitle: crystal structure of prephenate dehydrogenase tyra from bacillus2 anthracis in complex with nad and l-tyrosine
77c6aztA_
not modelled 39.1 17
PDB header:plant protein
Chain: A: PDB Molecule:asparaginyl endopeptidase 1;
PDBTitle: asparaginyl endopeptidase 1 bound to aan peptide, a tetrahedral2 intermediate
78c2go9A_
not modelled 39.0 8
PDB header:rna binding protein
Chain: A: PDB Molecule:u4/u6 snrna-associated splicing factor prp24;
PDBTitle: rrm domains 1 and 2 of prp24 from s. cerevisiae
79d1b7fa1
not modelled 38.9 14
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
80d1x5sa1
not modelled 38.9 11
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
81c2pjuD_
not modelled 38.8 23
PDB header:transcription
Chain: D: PDB Molecule:propionate catabolism operon regulatory protein;
PDBTitle: crystal structure of propionate catabolism operon regulatory protein2 prpr
82c1b7fA_
not modelled 38.7 25
PDB header:rna-binding protein/rna
Chain: A: PDB Molecule:protein (sxl-lethal protein);
PDBTitle: sxl-lethal protein/rna complex
83c2q5cA_
not modelled 38.7 5
PDB header:transcription
Chain: A: PDB Molecule:ntrc family transcriptional regulator;
PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum
84c2i38A_
not modelled 38.6 18
PDB header:rna binding protein/chimera
Chain: A: PDB Molecule:fusion protein consists of immunoglobulin g-binding protein
PDBTitle: solution structure of the rrm of srp20
85c2qmjA_
not modelled 38.4 30
PDB header:hydrolase
Chain: A: PDB Molecule:maltase-glucoamylase, intestinal;
PDBTitle: crystral structure of the n-terminal subunit of human maltase-2 glucoamylase in complex with acarbose
86d2u2fa_
not modelled 38.2 17
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
87c2mzsA_
not modelled 38.2 11
PDB header:rna binding protein
Chain: A: PDB Molecule:protein hrb1;
PDBTitle: nmr structure of the rrm2 domain of hrb1
88c2dnnA_
not modelled 38.1 11
PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding protein 12;
PDBTitle: solution structure of rna binding domain in rna-binding2 protein 12
89d1whwa_
not modelled 37.9 19
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
90d1fjeb2
not modelled 37.9 14
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
91d1gcca_
not modelled 37.8 31
Fold:DNA-binding domain
Superfamily:DNA-binding domain
Family:GCC-box binding domain
92c2jrsA_
not modelled 37.8 15
PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding protein 39;
PDBTitle: solution nmr structure of caper rrm2 domain. northeast2 structural genomics target hr4730a
93c5f7sA_
not modelled 37.8 27
PDB header:hydrolase
Chain: A: PDB Molecule:glycoside hydrolase family 31;
PDBTitle: cycloalternan-degrading enzyme from trueperella pyogenes
94c5zwoX_
not modelled 37.6 19
PDB header:splicing
Chain: X: PDB Molecule:u2 snrnp component ist3;
PDBTitle: cryo-em structure of the yeast b complex at average resolution of 3.92 angstrom
95c3md1B_
not modelled 37.5 22
PDB header:rna binding protein
Chain: B: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein
PDBTitle: crystal structure of the second rrm domain of yeast poly(u)-binding2 protein (pub1)
96d2cqca1
not modelled 37.1 8
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
97c2f3jA_
not modelled 37.1 14
PDB header:transport protein
Chain: A: PDB Molecule:rna and export factor binding protein 2;
PDBTitle: the solution structure of the ref2-i mrna export factor2 (residues 1-155).
98c3topA_
not modelled 37.1 24
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:maltase-glucoamylase, intestinal;
PDBTitle: crystral structure of the c-terminal subunit of human maltase-2 glucoamylase in complex with acarbose
99c6g6sA_
not modelled 37.0 23
PDB header:rna binding protein
Chain: A: PDB Molecule:apoptotic chromatin condensation inducer in the nucleus;
PDBTitle: crystal structure of human acinus rna recognition motif domain
100c2m9kA_
not modelled 36.9 16
PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding protein with multiple splicing 2;
PDBTitle: rbpms2-nter
101c5x7rB_
not modelled 36.8 16
PDB header:hydrolase, transferase
Chain: B: PDB Molecule:glycoside hydrolase family 31 alpha-glucosidase;
PDBTitle: crystal structure of paenibacillus sp. 598k alpha-1,6-2 glucosyltransferase complexed with isomaltohexaose
102c2f06B_
not modelled 36.8 19
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:conserved hypothetical protein;
PDBTitle: crystal structure of protein bt0572 from bacteroides thetaiotaomicron
103c2mzqA_
not modelled 36.8 19
PDB header:rna binding protein
Chain: A: PDB Molecule:single-strand telomeric dna-binding protein gbp2;
PDBTitle: nmr structure of the rrm3 domain of gbp2
104d2cpda1
not modelled 36.8 9
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
105c2dguA_
not modelled 36.7 12
PDB header:rna binding protein
Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein q;
PDBTitle: solution structure of the rna binding domain in2 heterogeneous nuclear ribonucleoprotein q
106d2ad9a1
not modelled 36.5 19
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
107c2n3lA_
not modelled 36.3 8
PDB header:rna binding protein
Chain: A: PDB Molecule:serine/arginine-rich protein 1, pfsr1-rrm1;
PDBTitle: solution structure of rna recognition motif-1 of plasmodium falciparum2 serine/arginine-rich protein 1.
108c2dh9A_
not modelled 36.3 18
PDB header:rna binding protein
Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m;
PDBTitle: solution structure of the c-terminal rna binding domain in2 heterogeneous nuclear ribonucleoprotein m
109d2cq2a1
not modelled 36.3 26
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
110c2qvcC_
not modelled 36.1 22
PDB header:transport protein
Chain: C: PDB Molecule:sugar abc transporter, periplasmic sugar-binding protein;
PDBTitle: crystal structure of a periplasmic sugar abc transporter from2 thermotoga maritima
111d2ghpa2
not modelled 35.9 8
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
112d2dita1
not modelled 35.8 25
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
113d2b0ga1
not modelled 35.8 16
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
114d1jmta_
not modelled 35.5 21
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Splicing factor U2AF subunits
115c2kviA_
not modelled 35.4 6
PDB header:rna binding protein
Chain: A: PDB Molecule:nuclear polyadenylated rna-binding protein 3;
PDBTitle: structure of nab3 rrm
116c4n0tA_
not modelled 35.3 12
PDB header:rna binding protein/rna
Chain: A: PDB Molecule:u4/u6 snrna-associated-splicing factor prp24;
PDBTitle: core structure of the u6 small nuclear ribonucleoprotein at 1.72 angstrom resolution
117c5mduA_
not modelled 35.0 11
PDB header:transcription
Chain: A: PDB Molecule:rpb7-binding protein seb1;
PDBTitle: structure of the rna recognition motif (rrm) of seb1 from s. pombe.
118c2a3jA_
not modelled 35.0 19
PDB header:rna binding protein
Chain: A: PDB Molecule:u1 small nuclear ribonucleoprotein a;
PDBTitle: structure of urndesign, a complete computational redesign2 of human u1a protein
119c2mjnA_
not modelled 34.9 17
PDB header:rna binding protein
Chain: A: PDB Molecule:nucleolysin tia-1 isoform p40;
PDBTitle: structure, dynamics and rna binding of the multi-domain splicing2 factor tia-1
120c3ns6B_
not modelled 34.8 8
PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit b;
PDBTitle: crystal structure of hte rna recognition motif of yeast eif3b residues2 76-170

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below