Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1236_(sugA)_1378933_1379856
DateWed Jul 31 22:05:32 BST 2019
Unique Job ID94237a3450e9e2a4
SequenceVTSVEQRTAT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:59.004 Y:71.317 Z:58.943
Model (left) based on template c3fh6F_
Top template information
PDB header:transport protein
Chain: F: PDB Molecule:maltose transport system permease protein malf;
PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli
Confidence and coverage
Confidence:100.0% Coverage: 92%
283 residues ( 92% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3fh6F_



100.0 20
PDB header:transport protein
Chain: F: PDB Molecule:maltose transport system permease protein malf;
PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli
2c4tqvI_



100.0 22
PDB header:transport protein
Chain: I: PDB Molecule:algm1;
PDBTitle: crystal structure of a bacterial abc transporter involved in the2 import of the acidic polysaccharide alginate
3d2r6gg1



100.0 16
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
4c2r6gF_



100.0 23
PDB header:hydrolase/transport protein
Chain: F: PDB Molecule:maltose transport system permease protein malf;
PDBTitle: the crystal structure of the e. coli maltose transporter
5c4tqvJ_



100.0 18
PDB header:transport protein
Chain: J: PDB Molecule:algm2;
PDBTitle: crystal structure of a bacterial abc transporter involved in the2 import of the acidic polysaccharide alginate
6c2onkC_



100.0 20
PDB header:membrane protein
Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease
PDBTitle: abc transporter modbc in complex with its binding protein2 moda
7d2onkc1



100.0 20
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
8d2r6gf2



100.0 23
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
9d3d31c1



100.0 16
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
10c3d31D_



100.0 16
PDB header:transport protein
Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease protein;
PDBTitle: modbc from methanosarcina acetivorans
11c4ymuC_



100.0 16
PDB header:protein binding/transport protein
Chain: C: PDB Molecule:abc-type amino acid transport system, permease component;
PDBTitle: crystal structure of an amino acid abc transporter complex with2 arginines and atps
12d3dhwa1



100.0 20
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
13d2r6gf1



96.6 11
Fold:MalF N-terminal region-like
Superfamily:MalF N-terminal region-like
Family:MalF N-terminal region-like
14c5kbuA_



67.2 12
PDB header:transport protein
Chain: A: PDB Molecule:glutamate receptor 2,voltage-dependent calcium channel
PDBTitle: cryo-em structure of glua2-2xstz complex at 7.8 angstrom resolution
15c5iwsA_



52.7 15
PDB header:transferase
Chain: A: PDB Molecule:protein-n(pi)-phosphohistidine-sugar phosphotransferase
PDBTitle: crystal structure of the transporter malt, the eiic domain from the2 maltose-specific phosphotransferase system
16c2m8gX_



41.1 16
PDB header:transcription
Chain: X: PDB Molecule:transcriptional regulator;
PDBTitle: structure, function, and tethering of dna-binding domains in 542 transcriptional activators
17c4l5eA_



33.4 13
PDB header:protein binding
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of a. aeolicus ntrc1 dna binding domain
18d1umqa_



31.4 3
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
19c1umqA_



31.4 3
PDB header:dna-binding protein
Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein;
PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity
20d1ntca_



27.7 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
21c2hx6A_



not modelled 21.4 12
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease;
PDBTitle: solution structure analysis of the phage t42 endoribonuclease regb
22d1fipa_



not modelled 21.2 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
23d1etob_



not modelled 18.9 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
24c3e7lD_



not modelled 16.9 23
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
25d1etxa_



not modelled 16.7 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
26c1g2hA_



not modelled 11.0 27
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein tyrr homolog;
PDBTitle: solution structure of the dna-binding domain of the tyrr2 protein of haemophilus influenzae
27d1g2ha_



not modelled 11.0 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
28c6gcs6_



not modelled 9.6 12
PDB header:oxidoreductase
Chain: 6: PDB Molecule:nd6 subunit (nu6m);
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
29c1ojlD_



not modelled 8.1 26
PDB header:response regulator
Chain: D: PDB Molecule:transcriptional regulatory protein zrar;
PDBTitle: crystal structure of a sigma54-activator suggests the mechanism for2 the conformational switch necessary for sigma54 binding
30c5m7nA_



not modelled 7.9 19
PDB header:signaling protein
Chain: A: PDB Molecule:nitrogen assimilation regulatory protein;
PDBTitle: crystal structure of ntrx from brucella abortus in complex with atp2 processed with the crystaldirect automated mounting and cryo-cooling3 technology
31c2cw1A_



not modelled 7.4 27
PDB header:de novo protein
Chain: A: PDB Molecule:sn4m;
PDBTitle: solution structure of the de novo-designed lambda cro fold2 protein
32c6iiuA_



not modelled 5.7 11
PDB header:signaling protein
Chain: A: PDB Molecule:soluble cytochrome b562,thromboxane a2 receptor,rubredoxin,
PDBTitle: crystal structure of the human thromboxane a2 receptor bound to2 ramatroban
33c2oarA_



not modelled 5.2 8
PDB header:membrane protein
Chain: A: PDB Molecule:large-conductance mechanosensitive channel;
PDBTitle: mechanosensitive channel of large conductance (mscl)

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below