Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1244_(lpqZ)_1386863_1387723
DateWed Jul 31 22:05:33 BST 2019
Unique Job IDee6f76f7295b71a9
SequenceVRITRILALL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:40.907 Y:42.451 Z:63.240
Model (left) based on template c4ne4A_
Top template information
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter, substrate binding protein
PDBTitle: crystal structure of abc transporter substrate binding protein prox2 from agrobacterium tumefaciens cocrystalized with btb
Confidence and coverage
Confidence:100.0% Coverage: 88%
252 residues ( 88% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4ne4A_
100.0 16
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter, substrate binding protein
PDBTitle: crystal structure of abc transporter substrate binding protein prox2 from agrobacterium tumefaciens cocrystalized with btb
2c4wepA_
100.0 20
PDB header:transport protein
Chain: A: PDB Molecule:putative osmoprotectant uptake system substrate-binding
PDBTitle: apo yehz from escerichia coli
3c3o66A_
100.0 15
PDB header:transport protein
Chain: A: PDB Molecule:glycine betaine/carnitine/choline abc transporter;
PDBTitle: crystal structure of glycine betaine/carnitine/choline abc transporter
4c4z7eB_
100.0 17
PDB header:transport protein
Chain: B: PDB Molecule:lmo1422 protein;
PDBTitle: soluble binding domain of lmo1422 abc-transporter
5d1sw5a_
100.0 17
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
6c3r6uA_
100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:choline-binding protein;
PDBTitle: crystal structure of choline binding protein opubc from bacillus2 subtilis
7c3pppA_
100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:glycine betaine/carnitine/choline-binding protein;
PDBTitle: structures of the substrate-binding protein provide insights into the2 multiple compatible solutes binding specificities of bacillus3 subtilis abc transporter opuc
8c4xz6A_
100.0 14
PDB header:transport protein
Chain: A: PDB Molecule:glycine betaine/proline abc transporter, periplasmic
PDBTitle: tmox in complex with tmao
9d1r9la_
100.0 14
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
10c6efrA_
100.0 18
PDB header:choline-binding protein
Chain: A: PDB Molecule:inicsnfr 1.0, a genetically encoded nicotine biosensor,
PDBTitle: crystal structure of inicsnfr 1.0
11c2rejA_
100.0 15
PDB header:choline-binding protein
Chain: A: PDB Molecule:putative glycine betaine abc transporter protein;
PDBTitle: abc-transporter choline binding protein in unliganded semi-2 closed conformation
12c3tmgA_
100.0 10
PDB header:transport protein
Chain: A: PDB Molecule:glycine betaine, l-proline abc transporter,
PDBTitle: crystal structure of glycine betaine, l-proline abc transporter,2 glycine/betaine/l-proline-binding protein (prox) from borrelia3 burgdorferi
13c3l6gA_
100.0 10
PDB header:glycine betaine-binding protein
Chain: A: PDB Molecule:betaine abc transporter permease and substrate binding
PDBTitle: crystal structure of lactococcal opuac in its open conformation
14c3chgB_
100.0 16
PDB header:ligand binding protein
Chain: B: PDB Molecule:glycine betaine-binding protein;
PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa
15c4ntlA_
98.8 10
PDB header:transport protein
Chain: A: PDB Molecule:lipoprotein, yaec family;
PDBTitle: crystal structure of a lipoprotein, yaec family (ef3198) from2 enterococcus faecalis v583 at 1.80 a resolution
16c6jf1A_
98.8 10
PDB header:transport protein
Chain: A: PDB Molecule:lipoprotein;
PDBTitle: crystal structure of the substrate binding protein of a methionine2 transporter from streptococcus pneumoniae
17c4gotA_
98.8 13
PDB header:lipid binding protein
Chain: A: PDB Molecule:methionine-binding lipoprotein metq;
PDBTitle: crystal structure of a putative methionine-binding lipoprotein2 (bsu32730) from bacillus subtilis subsp. subtilis str. 168 at 1.95 a3 resolution
18c4q5tA_
98.7 12
PDB header:transport protein
Chain: A: PDB Molecule:lipoprotein;
PDBTitle: crystal structure of an atmb (putative membrane lipoprotein) from2 streptococcus mutans ua159 at 1.91 a resolution
19c3gxaA_
98.6 13
PDB header:protein binding
Chain: A: PDB Molecule:outer membrane lipoprotein gna1946;
PDBTitle: crystal structure of gna1946
20c3k2dA_
98.5 13
PDB header:immune system
Chain: A: PDB Molecule:abc-type metal ion transport system, periplasmic component;
PDBTitle: crystal structure of immunogenic lipoprotein a from vibrio vulnificus
21c3un6A_
not modelled 98.5 11
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein saouhsc_00137;
PDBTitle: 2.0 angstrom crystal structure of ligand binding component of abc-type2 import system from staphylococcus aureus with zinc bound
22c3e4rA_
not modelled 98.4 15
PDB header:transport protein
Chain: A: PDB Molecule:nitrate transport protein;
PDBTitle: crystal structure of the alkanesulfonate binding protein2 (ssua) from the phytopathogenic bacteria xanthomonas3 axonopodis pv. citri bound to hepes
23c4ib2B_
not modelled 98.4 14
PDB header:transport protein
Chain: B: PDB Molecule:putative lipoprotein;
PDBTitle: crystal structure of a putative lipoprotein (rumgna_00858) from2 ruminococcus gnavus atcc 29149 at 1.76 a resolution
24c2x26A_
not modelled 98.4 14
PDB header:transport protein
Chain: A: PDB Molecule:periplasmic aliphatic sulphonates-binding protein;
PDBTitle: crystal structure of the periplasmic aliphatic sulphonate binding2 protein ssua from escherichia coli
25c3ix1A_
not modelled 98.3 11
PDB header:biosynthetic protein
Chain: A: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding
PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans
26c3tqwA_
not modelled 98.3 14
PDB header:transport protein
Chain: A: PDB Molecule:methionine-binding protein;
PDBTitle: structure of a abc transporter, periplasmic substrate-binding protein2 from coxiella burnetii
27c3ix1B_
not modelled 98.3 11
PDB header:biosynthetic protein
Chain: B: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding
PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans
28c3up9A_
not modelled 98.2 14
PDB header:methionine-binding protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a putative lipoprotein (actodo_00931) from2 actinomyces odontolyticus atcc 17982 at 2.35 a resolution
29c3ir1F_
not modelled 98.2 13
PDB header:protein binding
Chain: F: PDB Molecule:outer membrane lipoprotein gna1946;
PDBTitle: crystal structure of lipoprotein gna1946 from neisseria meningitidis
30c4ef2A_
not modelled 98.2 13
PDB header:methionine-binding protein
Chain: A: PDB Molecule:pheromone cob1/lipoprotein, yaec family;
PDBTitle: crystal structure of a pheromone cob1 precursor/lipoprotein, yaec2 family (ef2496) from enterococcus faecalis v583 at 2.10 a resolution
31c4oteA_
not modelled 98.1 14
PDB header:protein transport
Chain: A: PDB Molecule:lipoprotein;
PDBTitle: crystal structure of a putative lipoprotein (cd630_1653) from2 clostridium difficile 630 at 2.20 a resolution
32c3uifA_
not modelled 98.1 15
PDB header:transport protein
Chain: A: PDB Molecule:sulfonate abc transporter, periplasmic sulfonate-binding
PDBTitle: crystal structure of putative sulfonate abc transporter, periplasmic2 sulfonate-binding protein ssua from methylobacillus flagellatus kt
33d1xs5a_
not modelled 98.1 11
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
34c4k3fA_
not modelled 98.1 15
PDB header:transport protein
Chain: A: PDB Molecule:probable tonb-dependent receptor;
PDBTitle: crystal structure of a putative tonb-dependent receptor (pa5505) from2 pseudomonas aeruginosa pao1 at 1.60 a resolution
35c4qhqA_
not modelled 98.1 13
PDB header:transport protein
Chain: A: PDB Molecule:lipoprotein;
PDBTitle: the structure of a nutrient binding protein from burkholderia2 cenocepacia bound to methionine
36c4h67D_
not modelled 98.1 13
PDB header:transferase
Chain: D: PDB Molecule:pyrimidine precursor biosynthesis enzyme thi5;
PDBTitle: crystal structure of hmp synthase thi5 from s. cerevisiae
37c3hn0A_
not modelled 98.0 11
PDB header:transport protein
Chain: A: PDB Molecule:nitrate transport protein;
PDBTitle: crystal structure of an abc transporter (bdi_1369) from2 parabacteroides distasonis at 1.75 a resolution
38c3p7iA_
not modelled 97.9 14
PDB header:transport protein
Chain: A: PDB Molecule:phnd, subunit of alkylphosphonate abc transporter;
PDBTitle: crystal structure of escherichia coli phnd in complex with 2-2 aminoethyl phosphonate
39d1p99a_
not modelled 97.9 12
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
40c1p99A_
not modelled 97.9 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pg110;
PDBTitle: 1.7a crystal structure of protein pg110 from staphylococcus aureus
41c6esvA_
not modelled 97.8 12
PDB header:signaling protein
Chain: A: PDB Molecule:putative periplasmic phosphite-binding-like protein (pbl)
PDBTitle: structure of the phosphate-bound form of aiox from rhizobium sp. str.2 nt-26
42c3qslA_
not modelled 97.8 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative exported protein;
PDBTitle: structure of cae31940 from bordetella bronchiseptica rb50
43c2de4B_
not modelled 97.7 16
PDB header:hydrolase
Chain: B: PDB Molecule:dibenzothiophene desulfurization enzyme b;
PDBTitle: crystal structure of dszb c27s mutant in complex with biphenyl-2-2 sulfinic acid
44c5me4A_
not modelled 97.7 9
PDB header:transport protein
Chain: A: PDB Molecule:probable phosphite transport system-binding protein htxb;
PDBTitle: the structure of htxb from pseudomonas stutzeri in complex with2 hypophosphite to 1.52 a resolution
45c2x7pA_
not modelled 97.7 9
PDB header:unknown function
Chain: A: PDB Molecule:possible thiamine biosynthesis enzyme;
PDBTitle: the conserved candida albicans ca3427 gene product defines a new2 family of proteins exhibiting the generic periplasmic binding3 protein structural fold
46c5lv1C_
not modelled 97.5 12
PDB header:periplasmic binding protein
Chain: C: PDB Molecule:ptxb;
PDBTitle: 2.12 a resolution structure of ptxb from prochlorococcus marinus (mit2 9301) in complex with phosphite
47c4esxA_
not modelled 97.5 9
PDB header:transferase
Chain: A: PDB Molecule:pyrimidine biosynthesis enzyme thi13;
PDBTitle: crystal structure of c. albicans thi5 complexed with plp
48c5lq8A_
not modelled 97.2 10
PDB header:periplasmic binding protein
Chain: A: PDB Molecule:putative phosphonate binding protein for abc transporter;
PDBTitle: 1.52 a resolution structure of phnd1 from prochlorococcus marinus (mit2 9301) in complex with methylphosphonate
49c2g29A_
not modelled 97.1 10
PDB header:transport protein
Chain: A: PDB Molecule:nitrate transport protein nrta;
PDBTitle: crystal structure of the periplasmic nitrate-binding2 protein nrta from synechocystis pcc 6803
50c3n5lA_
not modelled 97.1 14
PDB header:transport protein
Chain: A: PDB Molecule:binding protein component of abc phosphonate transporter;
PDBTitle: crystal structure of a binding protein component of abc phosphonate2 transporter (pa3383) from pseudomonas aeruginosa at 1.97 a resolution
51d1us5a_
not modelled 97.1 10
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
52c4dddA_
not modelled 96.9 5
PDB header:immune system
Chain: A: PDB Molecule:immunogenic protein;
PDBTitle: crystal structure of an immunogenic protein from ehrlichia chaffeensis
53c5o2kE_
not modelled 96.8 14
PDB header:transport protein
Chain: E: PDB Molecule:probable phosphite transport system-binding protein ptxb;
PDBTitle: native apo-structure of pseudomonas stutzeri ptxb to 2.1 a resolution
54c4nmyA_
not modelled 96.7 9
PDB header:transport protein
Chain: A: PDB Molecule:abc-type transport system, extracellular solute-binding
PDBTitle: crystal structure of the thiamin-bound form of substrate-binding2 protein of abc transporter from clostridium difficile
55c4q0cA_
not modelled 96.5 18
PDB header:transferase
Chain: A: PDB Molecule:virulence sensor protein bvgs;
PDBTitle: 3.1 a resolution crystal structure of the b. pertussis bvgs2 periplasmic domain
56c5jvbB_
not modelled 96.1 10
PDB header:transport protein
Chain: B: PDB Molecule:phosphonate abc transporter, periplasmic phosphonate-
PDBTitle: 1.95a resolution structure of ptxb from trichodesmium erythraeum2 ims101 in complex with phosphite
57c4pshA_
not modelled 95.5 14
PDB header:protein transport
Chain: A: PDB Molecule:abc-type transporter, periplasmic subunit family 3;
PDBTitle: structure of holo argbp from t. maritima
58d2fyia1
not modelled 95.2 11
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
59c5ub6B_
not modelled 94.8 13
PDB header:metal binding protein
Chain: B: PDB Molecule:phosphate-binding protein;
PDBTitle: xac2383 from xanthomonas citri bound to pyrophosphate
60c5tpiA_
not modelled 94.3 12
PDB header:hydrolase
Chain: A: PDB Molecule:putative transcriptional regulator (lysr family);
PDBTitle: 1.47 angstrom crystal structure of the c-terminal substrate binding2 domain of lysr family transcriptional regulator from klebsiella3 pneumoniae.
61c5z50A_
not modelled 94.0 12
PDB header:dna binding protein
Chain: A: PDB Molecule:cys regulon transcriptional activator;
PDBTitle: crystal structure of pacysb regulatory domain
62c2i4cA_
not modelled 94.0 11
PDB header:transport protein
Chain: A: PDB Molecule:bicarbonate transporter;
PDBTitle: crystal structure of bicarbonate transport protein cmpa from2 synechocystis sp. pcc 6803 in complex with bicarbonate and calcium
63c3fj7A_
not modelled 93.5 11
PDB header:protein binding
Chain: A: PDB Molecule:major antigenic peptide peb3;
PDBTitle: crystal structure of l-phospholactate bound peb3
64c3woaA_
not modelled 93.3 14
PDB header:dna binding protein, sugar binding prote
Chain: A: PDB Molecule:repressor protein ci, maltose-binding periplasmic protein;
PDBTitle: crystal structure of lambda repressor (1-45) fused with maltose-2 binding protein
65c5gzsA_
not modelled 93.2 10
PDB header:signaling protein
Chain: A: PDB Molecule:ggdef family protein;
PDBTitle: structure of vc protein
66d1amfa_
not modelled 93.1 11
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
67c3lr1A_
not modelled 92.5 11
PDB header:transport protein
Chain: A: PDB Molecule:tungstate abc transporter, periplasmic tungstate-
PDBTitle: the crystal structure of the tungstate abc transporter from2 geobacter sulfurreducens
68c2h5yC_
not modelled 92.3 15
PDB header:metal transport
Chain: C: PDB Molecule:molybdate-binding periplasmic protein;
PDBTitle: crystallographic structure of the molybdate-binding protein of2 xanthomonas citri at 1.7 ang resolution bound to molybdate
69c4jb7A_
not modelled 92.0 9
PDB header:cell invasion
Chain: A: PDB Molecule:accessory colonization factor acfc;
PDBTitle: 1.42 angstrom resolution crystal structure of accessory colonization2 factor acfc (acfc) in complex with d-aspartic acid
70c1al3A_
not modelled 90.0 13
PDB header:transcription regulation
Chain: A: PDB Molecule:cys regulon transcriptional activator cysb;
PDBTitle: cofactor binding fragment of cysb from klebsiella aerogenes
71d1al3a_
not modelled 90.0 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
72c3muqB_
not modelled 89.7 8
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized conserved protein;
PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633
73d2esna2
not modelled 89.5 21
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
74c6onpA_
not modelled 88.8 11
PDB header:unknown function
Chain: A: PDB Molecule:periplasmic binding protein xoxj;
PDBTitle: crystal structure of periplasmic binding protein xoxj from2 methylobacterium extorquens am1
75c4z9nB_
not modelled 88.6 15
PDB header:transport protein
Chain: B: PDB Molecule:amino acid abc transporter, periplasmic amino acid-binding
PDBTitle: abc transporter / periplasmic binding protein from brucella ovis with2 glutathione bound
76c4rnsA_
not modelled 88.4 12
PDB header:transcription
Chain: A: PDB Molecule:pcp degradation transcriptional activation protein;
PDBTitle: pcpr inducer binding domain (apo-form)
77c3mplA_
not modelled 87.3 14
PDB header:signaling protein
Chain: A: PDB Molecule:virulence sensor protein bvgs;
PDBTitle: crystal structure of bordetella pertussis bvgs vft2 domain (double2 mutant f375e/q461e)
78c5z72B_
not modelled 87.2 10
PDB header:transcription
Chain: B: PDB Molecule:ccpc;
PDBTitle: crystal structure of ccpc regulatory domain in complex with citrate2 from bacillus amyloliquefaciens
79c2q2aD_
not modelled 87.1 16
PDB header:transport protein
Chain: D: PDB Molecule:artj;
PDBTitle: crystal structures of the arginine-, lysine-, histidine-binding2 protein artj from the thermophilic bacterium geobacillus3 stearothermophilus
80c2ypnA_
not modelled 86.0 17
PDB header:transferase
Chain: A: PDB Molecule:protein (hydroxymethylbilane synthase);
PDBTitle: hydroxymethylbilane synthase
81c5b70B_
not modelled 85.6 11
PDB header:transcription
Chain: B: PDB Molecule:lysr family transcriptional regulator;
PDBTitle: oxyr2 e204g regulatory domain from vibrio vulnificus
82c4eq9A_
not modelled 85.1 11
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter substrate-binding protein-amino acid
PDBTitle: 1.4 angstrom crystal structure of abc transporter glutathione-binding2 protein gsht from streptococcus pneumoniae strain canada mdr_19a in3 complex with glutathione
83c4c0rB_
not modelled 84.5 8
PDB header:transport protein
Chain: B: PDB Molecule:putative amino acid binding protein;
PDBTitle: molecular and structural basis of glutathione import in2 gram-positive bacteria via gsht and the cystine abc3 importer tcybc of streptococcus mutans.
84c5b3zB_
not modelled 84.3 11
PDB header:isomerase,sugar binding protein
Chain: B: PDB Molecule:peptidyl-prolyl cis-trans isomerase nima-interacting 1,
PDBTitle: crystal structure of hpin1 ww domain (5-39) fused with maltose-binding2 protein
85d1zbma1
not modelled 83.9 11
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
86c3c9hB_
not modelled 83.4 12
PDB header:transport protein
Chain: B: PDB Molecule:abc transporter, substrate binding protein;
PDBTitle: crystal structure of the substrate binding protein of the abc2 transporter from agrobacterium tumefaciens
87c4ng7A_
not modelled 83.3 9
PDB header:transport protein
Chain: A: PDB Molecule:trap periplasmic solute binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 citrobacter koseri (cko_04899), target efi-510094, apo, open3 structure
88d1xvxa_
not modelled 83.0 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
89c3kzgB_
not modelled 82.7 10
PDB header:transport protein
Chain: B: PDB Molecule:arginine 3rd transport system periplasmic binding
PDBTitle: crystal structure of an arginine 3rd transport system2 periplasmic binding protein from legionella pneumophila
90c6ddnB_
not modelled 82.7 13
PDB header:transport protein
Chain: B: PDB Molecule:probable sulfate-binding lipoprotein subi;
PDBTitle: the sulfate-binding protein subi from mycobacterium tuberculosis h37rv
91c2f7cA_
not modelled 80.8 11
PDB header:gene regulation
Chain: A: PDB Molecule:hth-type transcriptional regulator catm;
PDBTitle: catm effector binding domain with its effector cis,cis-muconate
92c2hxrA_
not modelled 80.1 13
PDB header:transcription
Chain: A: PDB Molecule:hth-type transcriptional regulator cynr;
PDBTitle: structure of the ligand binding domain of e. coli cynr, a2 transcriptional regulator controlling cyanate metabolism
93d1utha_
not modelled 79.9 11
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
94c4mlqA_
not modelled 79.0 13
PDB header:transferase
Chain: A: PDB Molecule:porphobilinogen deaminase;
PDBTitle: crystal structure of bacillus megaterium porphobilinogen deaminase
95c3vvfA_
not modelled 78.0 19
PDB header:transport protein
Chain: A: PDB Molecule:amino acid abc transporter, binding protein;
PDBTitle: crystal structure of ttc0807 complexed with arginine
96c4ovtA_
not modelled 77.8 12
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 ochrobacterium anthropi (oant_3902), target efi-510153, with bound l-3 fuconate
97c2uyeA_
not modelled 77.6 9
PDB header:transcription
Chain: A: PDB Molecule:regulatory protein;
PDBTitle: double mutant y110s,f111v dntr from burkholderia sp. strain2 dnt in complex with thiocyanate
98c4i1dB_
not modelled 77.3 14
PDB header:transport protein
Chain: B: PDB Molecule:abc transporter substrate-binding protein;
PDBTitle: the crystal structure of an abc transporter substrate-binding protein2 from bradyrhizobium japonicum usda 110
99c3jv9B_
not modelled 76.7 13
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, lysr family;
PDBTitle: the structure of a reduced form of oxyr from n. meningitidis
100d1i6aa_
not modelled 76.7 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
101c4oz9A_
not modelled 76.2 12
PDB header:lyase
Chain: A: PDB Molecule:membrane-bound lytic murein transglycosylase f;
PDBTitle: crystal structure of mltf from pseudomonas aeruginosa complexed with2 isoleucine
102c5uh0A_
not modelled 75.7 10
PDB header:hydrolase,oxidoreductase
Chain: A: PDB Molecule:membrane-bound lytic murein transglycosylase f;
PDBTitle: 1.95 angstrom resolution crystal structure of fragment (35-274) of2 membrane-bound lytic murein transglycosylase f from yersinia pestis.
103c3k4uA_
not modelled 75.2 8
PDB header:transport protein
Chain: A: PDB Molecule:binding component of abc transporter;
PDBTitle: crystal structure of putative binding component of abc transporter2 from wolinella succinogenes dsm 1740 complexed with lysine
104d1pdaa1
not modelled 74.9 16
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
105c6detA_
not modelled 74.7 11
PDB header:transport protein
Chain: A: PDB Molecule:tv2483;
PDBTitle: the crystal structure of tv2483 bound to l-arginine
106c3oxnD_
not modelled 74.4 5
PDB header:transcription regulator
Chain: D: PDB Molecule:putative transcriptional regulator, lysr family;
PDBTitle: the crystal structure of a putative transcriptional regulator from2 vibrio parahaemolyticus
107c2ql3G_
not modelled 74.3 15
PDB header:transcription
Chain: G: PDB Molecule:probable transcriptional regulator, lysr family protein;
PDBTitle: crystal structure of the c-terminal domain of a probable lysr family2 transcriptional regulator from rhodococcus sp. rha1
108c5vvhE_
not modelled 74.2 11
PDB header:transcription
Chain: E: PDB Molecule:octopine catabolism/uptake operon regulatory protein occr;
PDBTitle: crystal structure of the effector binding domain of lysr-type2 transcriptional regulator, occr from agrobacterium tumefaciens
109c4zdmA_
not modelled 72.5 12
PDB header:membrane protein
Chain: A: PDB Molecule:glutamate receptor kainate-like protein;
PDBTitle: pleurobrachia bachei iglur3 lbd glycine complex
110c2pt1A_
not modelled 72.3 13
PDB header:metal transport
Chain: A: PDB Molecule:iron transport protein;
PDBTitle: futa1 synechocystis pcc 6803
111c4h5fB_
not modelled 72.3 12
PDB header:transport protein
Chain: B: PDB Molecule:amino acid abc superfamily atp binding cassette
PDBTitle: crystal structure of an amino acid abc transporter substrate-binding2 protein from streptococcus pneumoniae canada mdr_19a bound to l-3 arginine, form 1
112c3eq1A_
not modelled 72.3 18
PDB header:transferase
Chain: A: PDB Molecule:porphobilinogen deaminase;
PDBTitle: the crystal structure of human porphobilinogen deaminase at2 2.8a resolution
113c3n6uA_
not modelled 71.9 10
PDB header:transcription regulator
Chain: A: PDB Molecule:lysr type regulator of tsambcd;
PDBTitle: effector binding domain of tsar in complex with its inducer p-2 toluenesulfonate
114c2qryD_
not modelled 71.6 9
PDB header:transport protein
Chain: D: PDB Molecule:thiamine-binding periplasmic protein;
PDBTitle: periplasmic thiamin binding protein
115c6h2tA_
not modelled 70.9 10
PDB header:signaling protein
Chain: A: PDB Molecule:probable glutamine-binding lipoprotein glnh (glnbp);
PDBTitle: glnh bound to glu, mycobacterium tuberculosis
116c2h9bB_
not modelled 69.7 10
PDB header:transcription
Chain: B: PDB Molecule:hth-type transcriptional regulator benm;
PDBTitle: crystal structure of the effector binding domain of a benm variant2 (benm r156h/t157s)
117c4fajA_
not modelled 68.7 10
PDB header:peptide binding protein
Chain: A: PDB Molecule:prgz;
PDBTitle: structure and mode of peptide binding of pheromone receptor prgz
118c4oenA_
not modelled 67.7 8
PDB header:transport protein
Chain: A: PDB Molecule:second substrate binding domain of putative amino acid abc
PDBTitle: crystal structure of the second substrate binding domain of a putative2 amino acid abc transporter from streptococcus pneumoniae canada3 mdr_19a
119c4yicA_
not modelled 67.3 12
PDB header:transport protein
Chain: A: PDB Molecule:trap transporter solute binding protein;
PDBTitle: crystal structure of a trap transporter solute binding protein2 (ipr025997) from bordetella bronchiseptica rb50 (bb0280, target efi-3 500035) with bound picolinic acid
120c2q89A_
not modelled 67.2 11
PDB header:transport protein
Chain: A: PDB Molecule:putative abc transporter amino acid-binding protein;
PDBTitle: crystal structure of ehub in complex with hydroxyectoine

Binding site prediction 

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