Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1246c_(-)_1388691_1388984
DateWed Jul 31 22:05:33 BST 2019
Unique Job ID3cde21ed08cc98fa
SequenceVSDDHPYHVA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:34.442 Y:39.160 Z:31.993
Model (left) based on template c3g5oC_
Top template information
PDB header:toxin/antitoxin
Chain: C: PDB Molecule:uncharacterized protein rv2866;
PDBTitle: the crystal structure of the toxin-antitoxin complex relbe2 (rv2865-2 2866) from mycobacterium tuberculosis
Confidence and coverage
Confidence: 99.9% Coverage: 85%
82 residues ( 85% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3g5oC_



99.9 54
PDB header:toxin/antitoxin
Chain: C: PDB Molecule:uncharacterized protein rv2866;
PDBTitle: the crystal structure of the toxin-antitoxin complex relbe2 (rv2865-2 2866) from mycobacterium tuberculosis
2c3bpqD_



99.9 17
PDB header:toxin
Chain: D: PDB Molecule:toxin rele3;
PDBTitle: crystal structure of relb-rele antitoxin-toxin complex from2 methanococcus jannaschii
3c2kheA_



99.9 28
PDB header:hydrolase
Chain: A: PDB Molecule:toxin-like protein;
PDBTitle: solution structure of the bacterial toxin rele from thermus2 thermophilus hb8
4c3kixy_



99.9 20
PDB header:ribosome
Chain: Y: PDB Molecule:
PDBTitle: structure of rele nuclease bound to the 70s ribosome (postcleavage2 state; part 3 of 4)
5d1wmia1



99.9 29
Fold:RelE-like
Superfamily:RelE-like
Family:RelE-like
6c2otrA_



99.6 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein hp0892;
PDBTitle: solution structure of conserved hypothetical protein hp0892 from2 helicobacter pylori
7c3oeiH_



99.4 25
PDB header:toxin, protein binding
Chain: H: PDB Molecule:relk (toxin rv3358);
PDBTitle: crystal structure of mycobacterium tuberculosis reljk (rv3357-rv3358-2 relbe3)
8d2a6sa1



99.3 21
Fold:RelE-like
Superfamily:RelE-like
Family:YoeB/Txe-like
9d1z8ma1



99.1 15
Fold:RelE-like
Superfamily:RelE-like
Family:RelE-like
10c4q2uH_



98.9 15
PDB header:toxin/toxin repressor
Chain: H: PDB Molecule:mrna interferase yafq;
PDBTitle: crystal structure of the e. coli dinj-yafq toxin-antitoxin complex
11c5cegB_



98.3 17
PDB header:toxin
Chain: B: PDB Molecule:plasmid stabilization system;
PDBTitle: x-ray structure of toxin/anti-toxin complex from mesorhizobium2 opportunistum
12c5cw7H_



98.0 20
PDB header:toxin
Chain: H: PDB Molecule:plasmid stabilization protein pare;
PDBTitle: crystal structure of the paaa2-pare2 antitoxin-toxin complex
13c3kxeB_



97.8 27
PDB header:protein binding
Chain: B: PDB Molecule:toxin protein pare-1;
PDBTitle: a conserved mode of protein recognition and binding in a2 pard-pare toxin-antitoxin complex
14c4mctD_



97.4 18
PDB header:toxin
Chain: D: PDB Molecule:killer protein;
PDBTitle: p. vulgaris higba structure, crystal form 1
15c5ja9D_



96.9 17
PDB header:toxin
Chain: D: PDB Molecule:toxin higb-2;
PDBTitle: crystal structure of the higb2 toxin in complex with nb6
16c6f8sD_



94.1 14
PDB header:toxin
Chain: D: PDB Molecule:putative killer protein;
PDBTitle: toxin-antitoxin complex grata
17c5ifgC_



80.2 15
PDB header:hydrolase/antitoxin
Chain: C: PDB Molecule:mrna interferase higb;
PDBTitle: crystal structure of higa-higb complex from e. coli
18c2kruA_



60.5 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:light-independent protochlorophyllide reductase subunit b;
PDBTitle: solution nmr structure of the pcp_red domain of light-independent2 protochlorophyllide reductase subunit b from chlorobium tepidum.3 northeast structural genomics consortium target ctr69a
19c2l09A_



50.9 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:asr4154 protein;
PDBTitle: solution nmr structure of protein asr4154 from nostoc sp. pcc71202 northeast structural genomics consortium target id nsr143
20c6avhA_



38.5 19
PDB header:ligase, plant protein
Chain: A: PDB Molecule:gh3.15 acyl acid amido synthetase;
PDBTitle: gh3.15 acyl acid amido synthetase
21c4b2gB_



not modelled 38.2 19
PDB header:signaling protein
Chain: B: PDB Molecule:gh3-1 auxin conjugating enzyme;
PDBTitle: crystal structure of an indole-3-acetic acid amido synthase from vitis2 vinifera involved in auxin homeostasis
22c4ewvB_



not modelled 36.3 19
PDB header:ligase
Chain: B: PDB Molecule:4-substituted benzoates-glutamate ligase gh3.12;
PDBTitle: crystal structure of gh3.12 in complex with ampcpp
23c4eplA_



not modelled 33.3 19
PDB header:ligase
Chain: A: PDB Molecule:jasmonic acid-amido synthetase jar1;
PDBTitle: crystal structure of arabidopsis thaliana gh3.11 (jar1) in complex2 with ja-ile
24c2lc0A_



not modelled 28.1 10
PDB header:protein binding
Chain: A: PDB Molecule:putative uncharacterized protein tb39.8;
PDBTitle: rv0020c_nter structure
25d1ugja_



not modelled 27.5 18
Fold:PRC-barrel domain
Superfamily:PRC-barrel domain
Family:RIKEN cDNA 2310057j16 protein (KIAA1543)
26c5kodA_



not modelled 26.5 21
PDB header:ligase
Chain: A: PDB Molecule:indole-3-acetic acid-amido synthetase gh3.5;
PDBTitle: crystal structure of gh3.5 acyl acid amido synthetase from arabidopsis2 thaliana
27d2pu9b1



not modelled 20.7 20
Fold:SH3-like barrel
Superfamily:Electron transport accessory proteins
Family:Ferredoxin thioredoxin reductase (FTR), alpha (variable) chain
28c5m5cC_



not modelled 19.8 18
PDB header:transport protein
Chain: C: PDB Molecule:calmodulin-regulated spectrin-associated protein 1;
PDBTitle: mechanism of microtubule minus-end recognition and protection by2 camsap proteins
29c2apnA_



not modelled 10.2 27
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein hi1723;
PDBTitle: hi1723 solution structure
30d1nwba_



not modelled 9.0 9
Fold:HesB-like domain
Superfamily:HesB-like domain
Family:HesB-like domain
31c4xukB_



not modelled 8.8 22
PDB header:hydrolase
Chain: B: PDB Molecule:putative hydrolase;
PDBTitle: crystal structure of hydrolase aboph in beta lactamase superfamily
32c2ynmD_



not modelled 8.6 9
PDB header:oxidoreductase
Chain: D: PDB Molecule:light-independent protochlorophyllide reductase subunit b;
PDBTitle: structure of the adpxalf3-stabilized transition state of the2 nitrogenase-like dark-operative protochlorophyllide oxidoreductase3 complex from prochlorococcus marinus with its substrate4 protochlorophyllide a
33c4le6B_



not modelled 8.5 21
PDB header:hydrolase
Chain: B: PDB Molecule:organophosphorus hydrolase;
PDBTitle: crystal structure of the phosphotriesterase ophc2 from pseudomonas2 pseudoalcaligenes
34d1xqba_



not modelled 6.5 17
Fold:YaeB-like
Superfamily:YaeB-like
Family:YaeB-like
35d3bzka5



not modelled 6.5 19
Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Tex RuvX-like domain-like
36d1s98a_



not modelled 6.2 13
Fold:HesB-like domain
Superfamily:HesB-like domain
Family:HesB-like domain
37c2d2aA_



not modelled 5.9 29
PDB header:metal transport
Chain: A: PDB Molecule:sufa protein;
PDBTitle: crystal structure of escherichia coli sufa involved in biosynthesis of2 iron-sulfur clusters
38c2h5gA_



not modelled 5.8 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:delta 1-pyrroline-5-carboxylate synthetase;
PDBTitle: crystal structure of human pyrroline-5-carboxylate synthetase
39c1hk7A_



not modelled 5.8 18
PDB header:chaperone
Chain: A: PDB Molecule:heat shock protein hsp82;
PDBTitle: middle domain of hsp90
40c1x0gA_



not modelled 5.7 43
PDB header:metal binding protein
Chain: A: PDB Molecule:isca;
PDBTitle: crystal structure of isca with the [2fe-2s] cluster
41c2k4zA_



not modelled 5.3 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:dsrr;
PDBTitle: solution nmr structure of allochromatium vinosum dsrr:2 northeast structural genomics consortium target op5

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