Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1248c_(kgd)_1389363_1393058
DateWed Jul 31 22:05:34 BST 2019
Unique Job ID9a0127a4185fcb99
SequenceVANISSPFGQ ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:98.395 Y:113.712 Z:93.783
Model (left) based on template c2xt6B_
Top template information
PDB header:lyase
Chain: B: PDB Molecule:2-oxoglutarate decarboxylase;
PDBTitle: crystal structure of mycobacterium smegmatis alpha-ketoglutarate2 decarboxylase homodimer (orthorhombic form)
Confidence and coverage
Confidence:100.0% Coverage: 80%
989 residues ( 80% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
1139 residues ( 93%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2xt6B_
100.0 88
PDB header:lyase
Chain: B: PDB Molecule:2-oxoglutarate decarboxylase;
PDBTitle: crystal structure of mycobacterium smegmatis alpha-ketoglutarate2 decarboxylase homodimer (orthorhombic form)
2c2yicC_
100.0 88
PDB header:lyase
Chain: C: PDB Molecule:2-oxoglutarate decarboxylase;
PDBTitle: crystal structure of the suca domain of mycobacterium smegmatis2 alpha-ketoglutarate decarboxylase (triclinic form)
3c2jgdA_
100.0 44
PDB header:oxidoreductase
Chain: A: PDB Molecule:2-oxoglutarate dehydrogenase e1 component;
PDBTitle: e. coli 2-oxoglutarate dehydrogenase (e1o)
4c4n72B_
100.0 24
PDB header:transferase
Chain: B: PDB Molecule:pyruvate dehydrogenase (dihydrolipoyltransacetylase
PDBTitle: catalytic domain from dihydrolipoamide acetyltransferase of pyruvate2 dehydrogenase from escherichia coli
5d1b5sa_
100.0 25
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
6d1dpba_
100.0 21
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
7c2ii4C_
100.0 27
PDB header:transferase
Chain: C: PDB Molecule:lipoamide acyltransferase component of branched-chain
PDBTitle: crystal structure of a cubic core of the dihydrolipoamide2 acyltransferase (e2b) component in the branched-chain alpha-ketoacid3 dehydrogenase complex (bckdc), coenzyme a-bound form
8c3l60A_
100.0 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:branched-chain alpha-keto acid dehydrogenase;
PDBTitle: crystal structure of branched-chain alpha-keto acid dehydrogenase2 subunit e2 from mycobacterium tuberculosis
9c3b8kA_
100.0 18
PDB header:transferase
Chain: A: PDB Molecule:dihydrolipoyllysine-residue acetyltransferase;
PDBTitle: structure of the truncated human dihydrolipoyl acetyltransferase (e2)
10d1scza_
100.0 27
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
11c6h60A_
100.0 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate dehydrogenase protein x component, mitochondrial;
PDBTitle: pseudo-atomic structural model of the e3bp component of the human2 pyruvate dehydrogenase multienzyme complex
12c3maeA_
100.0 27
PDB header:transferase
Chain: A: PDB Molecule:2-oxoisovalerate dehydrogenase e2 component,
PDBTitle: crystal structure of probable dihydrolipoamide acetyltransferase from2 listeria monocytogenes 4b f2365
13c3rqcB_
100.0 25
PDB header:transferase
Chain: B: PDB Molecule:probable lipoamide acyltransferase;
PDBTitle: crystal structure of the catalytic core of the 2-oxoacid dehydrogenase2 multienzyme complex from thermoplasma acidophilum
14d1umda_
100.0 19
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase PP module
15c1olsB_
100.0 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:2-oxoisovalerate dehydrogenase beta subunit;
PDBTitle: roles of his291-alpha and his146-beta' in the reductive acylation2 reaction catalyzed by human branched-chain alpha-ketoacid3 dehydrogenase
16d2ozla1
100.0 19
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase PP module
17d1q23a_
100.0 12
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
18c3mosA_
100.0 15
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: the structure of human transketolase
19d3claa_
100.0 12
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
20c2bp7F_
100.0 21
PDB header:oxidoreductase
Chain: F: PDB Molecule:2-oxoisovalerate dehydrogenase beta subunit;
PDBTitle: new crystal form of the pseudomonas putida branched-chain2 dehydrogenase (e1)
21c1ni4D_
not modelled 100.0 11
PDB header:oxidoreductase
Chain: D: PDB Molecule:pyruvate dehydrogenase e1 component: beta
PDBTitle: human pyruvate dehydrogenase
22c3dufD_
not modelled 100.0 19
PDB header:oxidoreductase/transferase
Chain: D: PDB Molecule:pyruvate dehydrogenase e1 component subunit beta;
PDBTitle: snapshots of catalysis in the e1 subunit of the pyruvate2 dehydrogenase multi-enzyme complex
23c1um9D_
not modelled 100.0 22
PDB header:oxidoreductase
Chain: D: PDB Molecule:2-oxo acid dehydrogenase beta subunit;
PDBTitle: branched-chain 2-oxo acid dehydrogenase (e1) from thermus2 thermophilus hb8 in apo-form
24c2o1xA_
not modelled 100.0 16
PDB header:transferase
Chain: A: PDB Molecule:1-deoxy-d-xylulose-5-phosphate synthase;
PDBTitle: 1-deoxy-d-xylulose 5-phosphate synthase (dxs) from deinococcus2 radiodurans
25c4c7vA_
not modelled 100.0 15
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: apo transketolase from lactobacillus salivarius at 2.2a resolution
26c6ouwA_
not modelled 100.0 17
PDB header:transferase
Chain: A: PDB Molecule:1-deoxy-d-xylulose-5-phosphate synthase;
PDBTitle: 1-deoxy-d-xylulose 5-phosphate synthase (dxps) from deinococcus2 radiodurans with enamine intermediate bound
27d1w85a_
not modelled 100.0 19
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase PP module
28c1itzC_
not modelled 100.0 13
PDB header:transferase
Chain: C: PDB Molecule:transketolase;
PDBTitle: maize transketolase in complex with tpp
29c2o1sC_
not modelled 100.0 20
PDB header:transferase
Chain: C: PDB Molecule:1-deoxy-d-xylulose-5-phosphate synthase;
PDBTitle: 1-deoxy-d-xylulose 5-phosphate synthase (dxs) from2 escherichia coli
30c1ik6A_
not modelled 100.0 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate dehydrogenase;
PDBTitle: 3d structure of the e1beta subunit of pyruvate2 dehydrogenase from the archeon pyrobaculum aerophilum
31d1qs0b1
not modelled 100.0 24
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase Pyr module
32c5vrbB_
not modelled 100.0 14
PDB header:transferase
Chain: B: PDB Molecule:transketolase;
PDBTitle: crystal structure of a transketolase from neisseria gonorrhoeae
33c1tkcA_
not modelled 100.0 16
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: specificity of coenzyme binding in thiamin diphosphate2 dependent enzymes: crystal structures of yeast3 transketolase in complex with analogs of thiamin4 diphosphate
34d1qs0a_
not modelled 100.0 15
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase PP module
35d2bfda1
not modelled 100.0 16
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase PP module
36c2i9dC_
not modelled 100.0 14
PDB header:transferase
Chain: C: PDB Molecule:chloramphenicol acetyltransferase;
PDBTitle: chloramphenicol acetyltransferase
37c2r8pA_
not modelled 100.0 12
PDB header:transferase
Chain: A: PDB Molecule:transketolase 1;
PDBTitle: transketolase from e. coli in complex with substrate d-fructose-6-2 phosphate
38c3hylB_
not modelled 100.0 15
PDB header:transferase
Chain: B: PDB Molecule:transketolase;
PDBTitle: crystal structure of transketolase from bacillus anthracis
39c2e6kB_
not modelled 100.0 14
PDB header:transferase
Chain: B: PDB Molecule:transketolase;
PDBTitle: x-ray structure of thermus thermopilus hb8 tt0505
40c5nd5A_
not modelled 100.0 14
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: crystal structure of transketolase from chlamydomonas reinhardtii in2 complex with tpp and mg2+
41c3m7iA_
not modelled 100.0 13
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: crystal structure of transketolase in complex with thiamine2 diphosphate, ribose-5-phosphate(pyranose form) and magnesium ion
42c3rimA_
not modelled 100.0 13
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: crystal structure of mycobacterium tuberculosis transketolase2 (rv1449c)
43c5hgxA_
not modelled 100.0 16
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: crystal structure of transketolase mutant - h261f from pichia stipitis
44d2bfdb1
not modelled 100.0 27
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase Pyr module
45c3uk1A_
not modelled 100.0 14
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: crystal structure of a transketolase from burkholderia thailandensis2 with an oxidized cysteinesulfonic acid in the active site
46c1r9jB_
not modelled 100.0 16
PDB header:transferase
Chain: B: PDB Molecule:transketolase;
PDBTitle: transketolase from leishmania mexicana
47d2ozlb1
not modelled 100.0 14
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase Pyr module
48d1w85b1
not modelled 100.0 22
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase Pyr module
49c3komB_
not modelled 100.0 12
PDB header:transferase
Chain: B: PDB Molecule:transketolase;
PDBTitle: crystal structure of apo transketolase from francisella tularensis
50d1umdb1
not modelled 99.9 24
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase Pyr module
51d1ik6a1
not modelled 99.9 27
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase Pyr module
52c2g28A_
not modelled 99.8 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate dehydrogenase e1 component;
PDBTitle: e. coli pyruvate dehydrogenase h407a variant2 phosphonolactylthiamin diphosphate complex
53d2r8oa2
not modelled 99.5 14
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like PP module
54d1gpua1
not modelled 99.5 16
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like PP module
55c3ahhA_
not modelled 99.4 14
PDB header:lyase
Chain: A: PDB Molecule:xylulose 5-phosphate/fructose 6-phosphate phosphoketolase;
PDBTitle: h142a mutant of phosphoketolase from bifidobacterium breve complexed2 with acetyl thiamine diphosphate
56d1r9ja2
not modelled 99.4 19
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like PP module
57d1itza1
not modelled 99.4 14
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like PP module
58d2r8oa1
not modelled 99.3 11
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like Pyr module
59d1qs0b2
not modelled 99.3 15
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
60d2bfdb2
not modelled 99.3 10
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
61d1r9ja1
not modelled 99.2 16
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like Pyr module
62d1umdb2
not modelled 99.2 16
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
63d1ik6a2
not modelled 99.2 15
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
64d2ozlb2
not modelled 99.1 8
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
65d1itza2
not modelled 99.1 13
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like Pyr module
66c5c4iA_
not modelled 99.1 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxalate oxidoreductase subunit alpha;
PDBTitle: structure of an oxalate oxidoreductase
67d1w85b2
not modelled 99.1 15
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain
68d1gpua2
not modelled 99.0 16
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like Pyr module
69c5b48A_
not modelled 98.9 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:2-oxoacid--ferredoxin oxidoreductase alpha subunit;
PDBTitle: 2-oxoacid:ferredoxin oxidoreductase 1 from sulfolobus tokodai
70c4qoyC_
not modelled 98.9 13
PDB header:oxidoreductase
Chain: C: PDB Molecule:pyruvate dehydrogenase e1 component;
PDBTitle: novel binding motif and new flexibility revealed by structural2 analysis of a pyruvate dehydrogenase-dihydrolipoyl acetyltransferase3 sub-complex from the escherichia coli pyruvate dehydrogenase multi-4 enzyme complex
71c5b47A_
not modelled 98.8 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:2-oxoacid--ferredoxin oxidoreductase alpha subunit;
PDBTitle: 2-oxoacid:ferredoxin oxidoreductase 2 from sulfolobus tokodai -2 pyruvate complex
72c4wbxC_
not modelled 98.8 17
PDB header:oxidoreductase
Chain: C: PDB Molecule:2-keto acid:ferredoxin oxidoreductase subunit alpha;
PDBTitle: conserved hypothetical protein pf1771 from pyrococcus furiosus solved2 by sulfur sad using swiss light source data
73c2c3yA_
not modelled 98.8 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate-ferredoxin oxidoreductase;
PDBTitle: crystal structure of the radical form of2 pyruvate:ferredoxin oxidoreductase from desulfovibrio3 africanus
74c6n2nA_
not modelled 98.8 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate flavodoxin/ferredoxin oxidoreductase domain
PDBTitle: crystal structure of 2-oxoglutarate:ferredoxin oxidoreductase from2 magnetococcus marinus
75c6cipD_
not modelled 98.8 15
PDB header:oxidoreductase
Chain: D: PDB Molecule:pyruvate-ferredoxin oxidoreductase;
PDBTitle: pyruvate:ferredoxin oxidoreductase from moorella thermoacetica with2 acetyl-tpp bound
76d2djia3
not modelled 98.7 22
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
77c2djiA_
not modelled 98.6 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate oxidase;
PDBTitle: crystal structure of pyruvate oxidase from aerococcus2 viridans containing fad
78c3ju3A_
not modelled 98.0 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:probable 2-oxoacid ferredoxin oxidoreductase, alpha chain;
PDBTitle: crystal structure of alpha chain of probable 2-oxoacid ferredoxin2 oxidoreductase from thermoplasma acidophilum
79d1t9ba3
not modelled 97.7 22
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
80d1jsca3
not modelled 97.6 22
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
81d2c42a3
not modelled 97.6 11
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Pyruvate-ferredoxin oxidoreductase, PFOR, domain II
82c2panF_
not modelled 97.4 25
PDB header:lyase
Chain: F: PDB Molecule:glyoxylate carboligase;
PDBTitle: crystal structure of e. coli glyoxylate carboligase
83d1ybha3
not modelled 97.2 22
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
84d2ieaa2
not modelled 97.1 16
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like PP module
85d1q6za3
not modelled 96.9 23
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
86c6n2oB_
not modelled 96.9 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:pyruvate ferredoxin/flavodoxin oxidoreductase, beta
PDBTitle: 2-oxoglutarate:ferredoxin oxidoreductase from magnetococcus marinus2 with 2-oxoglutarate, coenzyme a and succinyl-coa bound
87d2ez9a3
not modelled 96.9 19
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
88d2ihta3
not modelled 96.6 18
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
89d1ozha3
not modelled 96.4 23
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
90d2ji7a3
not modelled 96.4 24
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
91c3eyaE_
not modelled 96.4 15
PDB header:oxidoreductase
Chain: E: PDB Molecule:pyruvate dehydrogenase [cytochrome];
PDBTitle: structural basis for membrane binding and catalytic2 activation of the peripheral membrane enzyme pyruvate3 oxidase from escherichia coli
92c1powA_
not modelled 96.3 20
PDB header:oxidoreductase(oxygen as acceptor)
Chain: A: PDB Molecule:pyruvate oxidase;
PDBTitle: the refined structures of a stabilized mutant and of wild-type2 pyruvate oxidase from lactobacillus plantarum
93c1jscA_
not modelled 96.2 21
PDB header:lyase
Chain: A: PDB Molecule:acetohydroxy-acid synthase;
PDBTitle: crystal structure of the catalytic subunit of yeast2 acetohydroxyacid synthase: a target for herbicidal3 inhibitors
94c1t9dB_
not modelled 96.1 22
PDB header:transferase
Chain: B: PDB Molecule:acetolactate synthase, mitochondrial;
PDBTitle: crystal structure of yeast acetohydroxyacid synthase in complex with a2 sulfonylurea herbicide, metsulfuron methyl
95c5ahkB_
not modelled 96.1 12
PDB header:transferase
Chain: B: PDB Molecule:acetolactate synthase ii, large subunit;
PDBTitle: crystal structure of acetohydroxy acid synthase pf5 from2 pseudomonas protegens
96d1r9ja3
not modelled 96.1 11
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Transketolase C-terminal domain-like
97c4q9dA_
not modelled 96.0 15
PDB header:lyase
Chain: A: PDB Molecule:benzoylformate decarboxylase;
PDBTitle: x-ray structure of a putative thiamin diphosphate-dependent enzyme2 isolated from mycobacterium smegmatis
98c5essB_
not modelled 96.0 17
PDB header:transferase
Chain: B: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
PDBTitle: crystal structure of m. tuberculosis mend bound to mg2+ and covalent2 intermediate i (a thdp and decarboxylated 2-oxoglutarate adduct)
99c3ey9B_
not modelled 96.0 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:pyruvate dehydrogenase [cytochrome];
PDBTitle: structural basis for membrane binding and catalytic activation of the2 peripheral membrane enzyme pyruvate oxidase from escherichia coli
100d1itza3
not modelled 95.8 11
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Transketolase C-terminal domain-like
101d1gpua3
not modelled 95.7 15
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Transketolase C-terminal domain-like
102d1pvda3
not modelled 95.6 12
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
103c5b46B_
not modelled 95.2 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:2-oxoacid--ferredoxin oxidoreductase beta subunit;
PDBTitle: 2-oxoacid:ferredoxin oxidoreductase 2 from sulfolobus tokodai - ligand2 free form
104c2nxwB_
not modelled 95.1 17
PDB header:lyase
Chain: B: PDB Molecule:phenyl-3-pyruvate decarboxylase;
PDBTitle: crystal structure of phenylpyruvate decarboxylase of azospirillum2 brasilense
105c2v3wC_
not modelled 95.0 20
PDB header:lyase
Chain: C: PDB Molecule:benzoylformate decarboxylase;
PDBTitle: crystal structure of the benzoylformate decarboxylase variant l461a2 from pseudomonas putida
106c4rjjB_
not modelled 95.0 19
PDB header:lyase
Chain: B: PDB Molecule:acetolactate synthase;
PDBTitle: acetolactate synthase from bacillus subtilis bound to thdp - crystal2 form ii
107c2pgnA_
not modelled 94.9 18
PDB header:hydrolase
Chain: A: PDB Molecule:cyclohexane-1,2-dione hydrolase (cdh);
PDBTitle: the crystal structure of fad and thdp-dependent cyclohexane-1,2-dione2 hydrolase in complex with cyclohexane-1,2-dione
108c1upaC_
not modelled 94.7 13
PDB header:synthase
Chain: C: PDB Molecule:carboxyethylarginine synthase;
PDBTitle: carboxyethylarginine synthase from streptomyces2 clavuligerus (semet structure)
109c2jlaD_
not modelled 94.5 15
PDB header:transferase
Chain: D: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene
PDBTitle: crystal structure of e.coli mend, 2-succinyl-5-enolpyruvyl-2 6-hydroxy-3-cyclohexadiene-1-carboxylate synthase - semet3 protein
110d1ovma3
not modelled 94.4 16
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase PP module
111c2q27B_
not modelled 94.1 22
PDB header:lyase
Chain: B: PDB Molecule:oxalyl-coa decarboxylase;
PDBTitle: crystal structure of oxalyl-coa decarboxylase from escherichia coli
112c4k9qB_
not modelled 94.1 18
PDB header:lyase
Chain: B: PDB Molecule:benzoylformate decarboxylase;
PDBTitle: the crystal structure of benzoylformate decarboxylase from2 polynucleobacter necessarius
113c2ag1A_
not modelled 93.9 25
PDB header:lyase
Chain: A: PDB Molecule:benzaldehyde lyase;
PDBTitle: crystal structure of benzaldehyde lyase (bal)- semet
114d2r8oa3
not modelled 93.7 8
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Transketolase C-terminal domain-like
115c2ji6B_
not modelled 93.7 23
PDB header:lyase
Chain: B: PDB Molecule:oxalyl-coa decarboxylase;
PDBTitle: x-ray structure of oxalyl-coa decarboxylase in complex with 3-deaza-2 thdp and oxalyl-coa
116c1yi1A_
not modelled 93.4 21
PDB header:transferase
Chain: A: PDB Molecule:acetolactate synthase;
PDBTitle: crystal structure of arabidopsis thaliana acetohydroxyacid synthase in2 complex with a sulfonylurea herbicide, tribenuron methyl
117c1yd7A_
not modelled 92.3 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:2-keto acid:ferredoxin oxidoreductase subunit alpha;
PDBTitle: conserved hypothetical protein pfu-1647980-001 from pyrococcus2 furiosus
118c3lq1A_
not modelled 90.5 21
PDB header:transferase
Chain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
PDBTitle: crystal structure of 2-succinyl-6-hydroxy-2,4-cyclohexadiene 1-2 carboxylic acid synthase/2-oxoglutarate decarboxylase from listeria3 monocytogenes str. 4b f2365
119c1ovmC_
not modelled 89.6 19
PDB header:lyase
Chain: C: PDB Molecule:indole-3-pyruvate decarboxylase;
PDBTitle: crystal structure of indolepyruvate decarboxylase from2 enterobacter cloacae
120d2c42a1
not modelled 89.2 12
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:PFOR Pyr module

Binding site prediction 

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