Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1261c_(-)_1409490_1409939
DateWed Jul 31 22:05:35 BST 2019
Unique Job IDb1b1eca897da1a2c
SequenceMDISRWLERH ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:41.228 Y:34.746 Z:39.192
Model (left) based on template c3r5zB_
Top template information
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of a deazaflavin-dependent reductase from nocardia2 farcinica, with co-factor f420
Confidence and coverage
Confidence:100.0% Coverage: 90%
134 residues ( 90% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3r5zB_



100.0 37
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of a deazaflavin-dependent reductase from nocardia2 farcinica, with co-factor f420
2c3r5yC_



100.0 30
PDB header:unknown function
Chain: C: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of a deazaflavin-dependent nitroreductase from nocardia2 farcinica, with co-factor f420
3c3h96B_



100.0 29
PDB header:flavoprotein
Chain: B: PDB Molecule:f420-h2 dependent reductase a;
PDBTitle: msmeg_3358 f420 reductase
4c3r5wO_



100.0 42
PDB header:oxidoreductase
Chain: O: PDB Molecule:deazaflavin-dependent nitroreductase;
PDBTitle: structure of ddn, the deazaflavin-dependent nitroreductase from2 mycobacterium tuberculosis involved in bioreductive activation of pa-3 824, with co-factor f420
5c4y9iA_



100.0 37
PDB header:oxidoreductase
Chain: A: PDB Molecule:mycobacterium tuberculosis paralogous family 11;
PDBTitle: structure of f420-h2 dependent reductase (fdr-a) msmeg_2027
6c2iabB_



98.9 19
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a protein with fmn-binding split barrel fold2 (np_828636.1) from streptomyces avermitilis at 2.00 a resolution
7c3f7eB_



98.8 20
PDB header:unknown function
Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-
PDBTitle: msmeg_3380 f420 reductase
8d1rfea_



98.7 19
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
9c3tgvD_



98.6 18
PDB header:heme binding protein
Chain: D: PDB Molecule:heme-binding protein hutz;
PDBTitle: crystal structure of hutz,the heme storsge protein from vibrio2 cholerae
10d2asfa1



98.6 10
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
11d1vl7a_



98.5 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
12c4zkyB_



98.5 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:pyridoxamine 5-phosphate oxidase;
PDBTitle: structure of f420 binding protein, msmeg_6526, from mycobacterium2 smegmatis
13d1w9aa_



98.5 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
14d2htia1



98.4 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
15c2htiA_



98.4 15
PDB header:fmn-binding protein
Chain: A: PDB Molecule:bh0577 protein;
PDBTitle: crystal structure of a flavin-nucleotide-binding protein (bh_0577)2 from bacillus halodurans at 2.50 a resolution
16c3db0B_



98.4 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:lin2891 protein;
PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_472219.1) from listeria innocua at 2.00 a resolution
17d2fg9a1



98.4 13
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
18d2i02a1



98.3 10
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
19d2hq7a1



98.1 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
20d2hq9a1



98.1 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
21c3ec6A_



not modelled 98.0 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:general stress protein 26;
PDBTitle: crystal structure of the general stress protein 26 from bacillus2 anthracis str. sterne
22c2ig6B_



not modelled 98.0 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:nimc/nima family protein;
PDBTitle: crystal structure of a nimc/nima family protein (ca_c2569) from2 clostridium acetobutylicum at 1.80 a resolution
23c2re7A_



not modelled 98.0 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase related2 protein (psyc_0186) from psychrobacter arcticus 273-4 at 2.50 a3 resolution
24d2fura1



not modelled 98.0 14
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
25d2fhqa1



not modelled 97.9 14
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
26c3fkhB_



not modelled 97.8 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative pyridoxamine 5'-phosphate oxidase;
PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_601736.1) from corynebacterium glutamicum atcc 13032 kitasato at3 2.51 a resolution
27c3gasA_



not modelled 97.8 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:heme oxygenase;
PDBTitle: crystal structure of helicobacter pylori heme oxygenase hugz2 in complex with heme
28c3u0iA_



not modelled 97.6 11
PDB header:unknown function
Chain: A: PDB Molecule:probable fad-binding, putative uncharacterized protein;
PDBTitle: crystal structure of a probable fad-binding, putative uncharacterized2 protein from brucella melitensis
29c2hhzA_



not modelled 97.6 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related2 protein (ssuidraft_2804) from streptococcus suis 89/1591 at 2.00 a3 resolution
30c5escD_



not modelled 97.5 19
PDB header:oxidoreductase
Chain: D: PDB Molecule:hupz;
PDBTitle: crystal structure of group a streptococcus hupz
31c6eciQ_



not modelled 97.5 14
PDB header:fad-binding protein
Chain: Q: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-binding
PDBTitle: structure of the fad binding protein msmeg_5243 from mycobacterium2 smegmatis
32c2q9kA_



not modelled 97.4 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative oxidoreductase (exig_1997) from2 exiguobacterium sibiricum 255-15 at 1.59 a resolution
33c4ybnB_



not modelled 97.3 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:flavin-nucleotide-binding protein;
PDBTitle: structure of the fad and heme binding protein msmeg_4975 from2 mycobacterium smegmatis
34c3cp3A_



not modelled 97.3 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved protein of unknown function dip18742 from corynebacterium diphtheriae
35c3u34D_



not modelled 97.2 11
PDB header:protein binding
Chain: D: PDB Molecule:general stress protein;
PDBTitle: crystal structure of the general stress fmn/fad binding protein from2 the phytopathogen xanthomonas citri
36c2qeaB_



not modelled 97.1 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative general stress protein 26;
PDBTitle: crystal structure of a putative general stress protein 26 (jann_0955)2 from jannaschia sp. ccs1 at 2.46 a resolution
37c3dmbA_



not modelled 97.0 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative general stress protein 26 with a pnp-oxidase like
PDBTitle: crystal structure of a putative general stress family protein2 (xcc2264) from xanthomonas campestris pv. campestris at 2.30 a3 resolution
38c3dnhB_



not modelled 97.0 12
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein atu2129;
PDBTitle: the crystal structure of the protein atu2129 (unknown function) from2 agrobacterium tumefaciens str. c58
39d2arza1



not modelled 96.8 23
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
40c2htdB_



not modelled 96.8 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:predicted flavin-nucleotide-binding protein from cog3576
PDBTitle: crystal structure of a putative pyridoxamine 5'-phosphate oxidase2 (ldb0262) from lactobacillus delbrueckii subsp. at 1.60 a resolution
41c5bncB_



not modelled 96.7 20
PDB header:heme binding protein
Chain: B: PDB Molecule:heme binding protein msmeg_6519;
PDBTitle: structure of heme binding protein msmeg_6519 from mycobacterium2 smegmatis
42c6rk0A_



not modelled 96.7 15
PDB header:flavoprotein
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: structure of the flavocytochrome anf3 from azotobacter vinelandii
43d2a2ja1



not modelled 96.6 13
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
44d1t9ma_



not modelled 96.6 17
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
45c1nrgA_



not modelled 96.5 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyridoxine 5'-phosphate oxidase;
PDBTitle: structure and properties of recombinant human pyridoxine-5'-phosphate2 oxidase
46d1nrga_



not modelled 96.5 12
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
47c2a2jA_



not modelled 96.2 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase;
PDBTitle: crystal structure of a putative pyridoxine 5'-phosphate oxidase2 (rv2607) from mycobacterium tuberculosis
48d1ty9a_



not modelled 95.9 16
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
49c4hmwB_



not modelled 95.7 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase;
PDBTitle: crystal structure of phzg from burkholderia lata 383
50d1flma_



not modelled 94.9 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
51d1ci0a_



not modelled 94.0 10
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
52d1dnla_



not modelled 93.8 12
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
53d2vpaa1



not modelled 89.3 18
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
54d2ptfa1



not modelled 87.7 16
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:MTH863-like
55c2ptfB_



not modelled 86.9 16
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein mth_863;
PDBTitle: crystal structure of protein mth_863 from methanobacterium2 thermoautotrophicum bound to fmn
56c2ou5B_



not modelled 85.0 24
PDB header:flavoprotein
Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-binding;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related fmn-2 binding protein (jann_0254) from jannaschia sp. ccs1 at 1.60 a3 resolution
57d1xhna1



not modelled 84.7 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
58c2ol5B_



not modelled 78.2 12
PDB header:transcription regulator
Chain: B: PDB Molecule:pai 2 protein;
PDBTitle: crystal structure of a protease synthase and sporulation negative2 regulatory protein pai 2 from bacillus stearothermophilus
59c4n7rD_



not modelled 61.4 12
PDB header:oxidoreductase/protein binding
Chain: D: PDB Molecule:genomic dna, chromosome 3, p1 clone: mxl8;
PDBTitle: crystal structure of arabidopsis glutamyl-trna reductase in complex2 with its binding protein
60c2i51B_



not modelled 36.9 17
PDB header:flavoprotein
Chain: B: PDB Molecule:uncharacterized conserved protein of cog5135;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related, fmn2 binding protein (npun_f5749) from nostoc punctiforme pcc 73102 at3 1.40 a resolution
61c4a2nB_



not modelled 29.0 26
PDB header:transferase
Chain: B: PDB Molecule:isoprenylcysteine carboxyl methyltransferase;
PDBTitle: crystal structure of ma-icmt
62d2imla1



not modelled 25.3 11
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:MTH863-like
63c5v7pA_



not modelled 24.9 19
PDB header:transferase
Chain: A: PDB Molecule:protein-s-isoprenylcysteine o-methyltransferase;
PDBTitle: atomic structure of the eukaryotic intramembrane ras methyltransferase2 icmt (isoprenylcysteine carboxyl methyltransferase), in complex with3 a monobody
64c4u65A_



not modelled 22.0 17
PDB header:transferase/hydrolase
Chain: A: PDB Molecule:two component histidine kinase, ggdef domain protein/eal
PDBTitle: structure of the periplasmic output domain of the legionella2 pneumophila lapd ortholog cdgs9 in complex with pseudomonas3 fluorescens lapg
65d2nr4a1



not modelled 10.5 19
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:MTH863-like
66c4wt5A_



not modelled 10.5 26
PDB header:chaperone
Chain: A: PDB Molecule:rubisco accumulation factor 1, isoform 2;
PDBTitle: the c-terminal domain of rubisco accumulation factor 1 from2 arabidopsis thaliana, crystal form ii
67c5d5pC_



not modelled 9.4 32
PDB header:transferase
Chain: C: PDB Molecule:hcgb;
PDBTitle: hcgb from methanococcus maripaludis
68c3brcA_



not modelled 7.9 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved protein of unknown function;
PDBTitle: crystal structure of a conserved protein of unknown function from2 methanobacterium thermoautotrophicum
69c2levA_



not modelled 7.3 29
PDB header:transcription regulator/dna
Chain: A: PDB Molecule:ler;
PDBTitle: structure of the dna complex of the c-terminal domain of ler
70d1kb0a2



not modelled 7.3 36
Fold:8-bladed beta-propeller
Superfamily:Quinoprotein alcohol dehydrogenase-like
Family:Quinoprotein alcohol dehydrogenase-like
71c6mk1V_



not modelled 7.0 50
PDB header:protein fibril
Chain: V: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament heat_r1
72c3fgeA_



not modelled 6.3 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative flavin reductase with split barrel domain;
PDBTitle: crystal structure of putative flavin reductase with split barrel2 domain (yp_750721.1) from shewanella frigidimarina ncimb 400 at 1.743 a resolution
73c3b5mD_



not modelled 6.1 24
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved uncharacterized protein from2 rhodopirellula baltica
74c4fprC_



not modelled 6.0 43
PDB header:protein binding
Chain: C: PDB Molecule:avirulence effector avrlm4-7;
PDBTitle: structure of a fungal protein
75c1ztnA_



not modelled 5.2 33
PDB header:transport protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily c member 4;
PDBTitle: inactivation gate of potassium channel raw3, nmr, 8 structures
76c6d10A_



not modelled 5.1 20
PDB header:cell adhesion
Chain: A: PDB Molecule:alginate biosynthesis protein algf;
PDBTitle: cs-rosetta determined structures of the c-terminal domain of algf from2 p. aeruginosa

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