Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1262c_(-)_1409944_1410378
DateWed Jul 31 22:05:35 BST 2019
Unique Job IDddb54c33e3454915
SequenceMPCVFCAIIA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:46.071 Y:46.264 Z:47.447
Model (left) based on template c3l7xA_
Top template information
PDB header:cell cycle
Chain: A: PDB Molecule:putative hit-like protein involved in cell-cycle
PDBTitle: the crystal structure of smu.412c from streptococcus mutans ua159
Confidence and coverage
Confidence:100.0% Coverage: 94%
135 residues ( 94% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3l7xA_



100.0 33
PDB header:cell cycle
Chain: A: PDB Molecule:putative hit-like protein involved in cell-cycle
PDBTitle: the crystal structure of smu.412c from streptococcus mutans ua159
2c3o0mB_



100.0 75
PDB header:hydrolase
Chain: B: PDB Molecule:hit family protein;
PDBTitle: crystal structure of a zn-bound histidine triad family protein from2 mycobacterium smegmatis
3c2eo4A_



100.0 32
PDB header:hydrolase
Chain: A: PDB Molecule:150aa long hypothetical histidine triad nucleotide-binding
PDBTitle: crystal structure of hypothetical histidine triad nucleotide-binding2 protein st2152 from sulfolobus tokodaii strain7
4c3p0tB_



100.0 29
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an hit-like protein from mycobacterium2 paratuberculosis
5c6iq1A_



100.0 30
PDB header:hydrolase
Chain: A: PDB Molecule:adenosine 5'-monophosphoramidase;
PDBTitle: crystal structure of histidine triad nucleotide-binding protein from2 candida albicans
6c3ksvA_



100.0 30
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: hypothetical protein from leishmania major
7c3lb5B_



100.0 33
PDB header:cell cycle
Chain: B: PDB Molecule:hit-like protein involved in cell-cycle regulation;
PDBTitle: crystal structure of hit-like protein involved in cell-cycle2 regulation from bartonella henselae with unknown ligand
8c3anoA_



100.0 23
PDB header:transferase
Chain: A: PDB Molecule:ap-4-a phosphorylase;
PDBTitle: crystal structure of a novel diadenosine 5',5'''-p1,p4-tetraphosphate2 phosphorylase from mycobacterium tuberculosis h37rv
9c3imiB_



100.0 33
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hit family protein;
PDBTitle: 2.01 angstrom resolution crystal structure of a hit family protein2 from bacillus anthracis str. 'ames ancestor'
10d1y23a_



100.0 33
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
11c5cs2A_



100.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:histidine triad protein;
PDBTitle: crystal structure of plasmodium falciparum diadenosine triphosphate2 hydrolase in complex with cyclomarin a
12d1kpfa_



100.0 32
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
13c6d6jB_



100.0 34
PDB header:hydrolase
Chain: B: PDB Molecule:hit family hydrolase;
PDBTitle: crystal structure of hit family hydrolase from legionella pneumophila2 philadelphia 1
14c4eguA_



100.0 31
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:histidine triad (hit) protein;
PDBTitle: 0.95a resolution structure of a histidine triad protein from2 clostridium difficile
15d1rzya_



100.0 32
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
16c3n1tE_



100.0 25
PDB header:hydrolase
Chain: E: PDB Molecule:hit-like protein hint;
PDBTitle: crystal structure of the h101a mutant echint gmp complex
17d1emsa1



100.0 29
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
18d2oika1



100.0 19
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
19c1emsB_



100.0 31
PDB header:antitumor protein
Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein;
PDBTitle: crystal structure of the c. elegans nitfhit protein
20c3r6fA_



100.0 29
PDB header:hydrolase
Chain: A: PDB Molecule:hit family protein;
PDBTitle: crystal structure of a zinc-containing hit family protein from2 encephalitozoon cuniculi
21d1xqua_



not modelled 100.0 32
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
22c1xquA_



not modelled 100.0 32
PDB header:hydrolase
Chain: A: PDB Molecule:hit family hydrolase;
PDBTitle: hit family hydrolase from clostridium thermocellum cth-393
23d1z84a2



not modelled 100.0 12
Fold:HIT-like
Superfamily:HIT-like
Family:Hexose-1-phosphate uridylyltransferase
24d1fita_



not modelled 100.0 30
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
25c3oj7A_



not modelled 100.0 30
PDB header:metal binding protein
Chain: A: PDB Molecule:putative histidine triad family protein;
PDBTitle: crystal structure of a histidine triad family protein from entamoeba2 histolytica, bound to sulfate
26d1guqa2



not modelled 99.9 17
Fold:HIT-like
Superfamily:HIT-like
Family:Hexose-1-phosphate uridylyltransferase
27c4q61J_



not modelled 99.9 33
PDB header:cell cycle
Chain: J: PDB Molecule:uncharacterized hit-like protein hp_0404;
PDBTitle: hit like protein from helicobacter pylori 26695
28c1zwjA_



not modelled 99.9 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative galactose-1-phosphate uridyl transferase;
PDBTitle: x-ray structure of galt-like protein from arabidopsis thaliana2 at5g18200
29c4incA_



not modelled 99.9 31
PDB header:hydrolase
Chain: A: PDB Molecule:histidine triad nucleotide-binding protein 2,
PDBTitle: human histidine triad nucleotide binding protein 2
30c1gupC_



not modelled 99.9 17
PDB header:nucleotidyltransferase
Chain: C: PDB Molecule:galactose-1-phosphate uridylyltransferase;
PDBTitle: structure of nucleotidyltransferase complexed with udp-2 galactose
31c5in3A_



not modelled 99.9 15
PDB header:transferase
Chain: A: PDB Molecule:galactose-1-phosphate uridylyltransferase;
PDBTitle: crystal structure of glucose-1-phosphate bound nucleotidylated human2 galactose-1-phosphate uridylyltransferase
32c3i24B_



not modelled 99.9 13
PDB header:hydrolase
Chain: B: PDB Molecule:hit family hydrolase;
PDBTitle: crystal structure of a hit family hydrolase protein from vibrio2 fischeri. northeast structural genomics consortium target id vfr176
33c3oheA_



not modelled 99.9 16
PDB header:hydrolase
Chain: A: PDB Molecule:histidine triad (hit) protein;
PDBTitle: crystal structure of a histidine triad protein (maqu_1709) from2 marinobacter aquaeolei vt8 at 1.20 a resolution
34c3nrdB_



not modelled 99.9 19
PDB header:nucleotide binding protein
Chain: B: PDB Molecule:histidine triad (hit) protein;
PDBTitle: crystal structure of a histidine triad (hit) protein (smc02904) from2 sinorhizobium meliloti 1021 at 2.06 a resolution
35c3i4sB_



not modelled 99.9 15
PDB header:hydrolase
Chain: B: PDB Molecule:histidine triad protein;
PDBTitle: crystal structure of histidine triad protein blr8122 from2 bradyrhizobium japonicum
36c4ndgB_



not modelled 99.7 26
PDB header:dna binding protein/rna/dna
Chain: B: PDB Molecule:aprataxin;
PDBTitle: human aprataxin (aptx) bound to rna-dna and zn - adenosine vanadate2 transition state mimic complex
37c3splC_



not modelled 99.6 16
PDB header:hydrolase/dna
Chain: C: PDB Molecule:aprataxin-like protein;
PDBTitle: crystal structure of aprataxin ortholog hnt3 in complex with dna and2 amp
38d1z84a1



not modelled 99.5 17
Fold:HIT-like
Superfamily:HIT-like
Family:Hexose-1-phosphate uridylyltransferase
39c3jb9c_



not modelled 99.5 13
PDB header:rna binding protein/rna
Chain: C: PDB Molecule:u5 snrna;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
40c4i5wA_



not modelled 99.4 18
PDB header:transferase
Chain: A: PDB Molecule:5',5'''-p-1,p-4-tetraphosphate phosphorylase 2;
PDBTitle: crystal structure of yeast ap4a phosphorylase apa2 in complex with amp
41c6id1U_



not modelled 99.1 18
PDB header:splicing
Chain: U: PDB Molecule:cwf19-like protein 2;
PDBTitle: cryo-em structure of a human intron lariat spliceosome after prp432 loaded (ils2 complex) at 2.9 angstrom resolution
42c4qvuA_



not modelled 99.1 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a duf4931 family protein (bce0241) from bacillus2 cereus atcc 10987 at 2.65 a resolution
43d3bl9a1



not modelled 99.1 19
Fold:HIT-like
Superfamily:HIT-like
Family:mRNA decapping enzyme DcpS C-terminal domain
44c3bl9B_



not modelled 99.0 19
PDB header:hydrolase
Chain: B: PDB Molecule:scavenger mrna-decapping enzyme dcps;
PDBTitle: synthetic gene encoded dcps bound to inhibitor dg157493
45d1vlra1



not modelled 98.9 17
Fold:HIT-like
Superfamily:HIT-like
Family:mRNA decapping enzyme DcpS C-terminal domain
46c1xmlA_



not modelled 98.8 19
PDB header:chaperone
Chain: A: PDB Molecule:heat shock-like protein 1;
PDBTitle: structure of human dcps
47c6gbsB_



not modelled 98.8 22
PDB header:hydrolase
Chain: B: PDB Molecule:putative mrna decapping protein;
PDBTitle: crystal structure of the c. themophilum scavenger decapping enzyme2 dcps apo form
48c5bv3C_



not modelled 98.7 14
PDB header:hydrolase
Chain: C: PDB Molecule:m7gpppx diphosphatase;
PDBTitle: yeast scavenger decapping enzyme in complex with m7gdp
49d1guqa1



not modelled 98.3 18
Fold:HIT-like
Superfamily:HIT-like
Family:Hexose-1-phosphate uridylyltransferase
50d2pofa1



not modelled 94.7 17
Fold:HIT-like
Superfamily:HIT-like
Family:CDH-like
51c4lvjA_



not modelled 84.1 13
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:plasmid recombination enzyme;
PDBTitle: mobm relaxase domain (mobv; mob_pre) bound to plasmid pmv158 orit dna2 (22nt). mn-bound crystal structure at ph 5.5
52c3vg8F_



not modelled 30.8 12
PDB header:unknown function
Chain: F: PDB Molecule:hypothetical protein tthb210;
PDBTitle: crystal structure of hypothetical protein tthb210 from thermus2 thermophilus hb8
53c3csqC_



not modelled 29.1 14
PDB header:hydrolase
Chain: C: PDB Molecule:morphogenesis protein 1;
PDBTitle: crystal and cryoem structural studies of a cell wall2 degrading enzyme in the bacteriophage phi29 tail
54c2ef0A_



not modelled 28.7 10
PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: crystal structure of ornithine carbamoyltransferase from thermus2 thermophilus
55c3sdsA_



not modelled 18.2 17
PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase, mitochondrial;
PDBTitle: crystal structure of a mitochondrial ornithine carbamoyltransferase2 from coccidioides immitis
56d1uf0a_



not modelled 17.7 3
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Doublecortin (DC)
Family:Doublecortin (DC)
57c4g6uB_



not modelled 17.6 12
PDB header:toxin
Chain: B: PDB Molecule:ec869 cdii;
PDBTitle: cdia-ct/cdii toxin and immunity complex from escherichia coli
58d1duvg1



not modelled 16.5 19
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
59c4zqvA_



not modelled 16.3 14
PDB header:immune system
Chain: A: PDB Molecule:cdii immunity protein;
PDBTitle: cdii immunity protein from yersinia kristensenii
60c3txxD_



not modelled 16.0 15
PDB header:transferase
Chain: D: PDB Molecule:putrescine carbamoyltransferase;
PDBTitle: crystal structure of putrescine transcarbamylase from enterococcus2 faecalis
61d1vlva1



not modelled 15.6 17
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
62c5mkwA_



not modelled 14.8 21
PDB header:hydrolase
Chain: A: PDB Molecule:dna annealing helicase and endonuclease zranb3;
PDBTitle: crystal structure of the human zranb3 hnh domain
63c3tpfF_



not modelled 14.6 12
PDB header:transferase
Chain: F: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: crystal structure of anabolic ornithine carbamoyltransferase from2 campylobacter jejuni subsp. jejuni nctc 11168
64d2at2a1



not modelled 13.3 15
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
65d1otha1



not modelled 12.8 11
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
66d1mg4a_



not modelled 12.5 3
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Doublecortin (DC)
Family:Doublecortin (DC)
67c2dnfA_



not modelled 12.4 10
PDB header:protein binding
Chain: A: PDB Molecule:doublecortin domain-containing protein 2;
PDBTitle: solution structure of rsgi ruh-062, a dcx domain from human
68c5nnqA_



not modelled 12.3 13
PDB header:transferase
Chain: A: PDB Molecule:ctatc;
PDBTitle: aspartate transcarbamoylase from chaetomium thermophilum cad-like2 bound to carbamoyl phosphate
69c3bddD_



not modelled 11.6 8
PDB header:transcription
Chain: D: PDB Molecule:regulatory protein marr;
PDBTitle: crystal structure of a putative multiple antibiotic-resistance2 repressor (ssu05_1136) from streptococcus suis 89/1591 at 2.20 a3 resolution
70c2qwwB_



not modelled 11.6 0
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution
71c4f2gA_



not modelled 11.6 13
PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase 1;
PDBTitle: the crystal structure of ornithine carbamoyltransferase from2 burkholderia thailandensis e264
72d1ml4a1



not modelled 11.5 15
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
73c2rgwD_



not modelled 11.4 9
PDB header:transferase
Chain: D: PDB Molecule:aspartate carbamoyltransferase;
PDBTitle: catalytic subunit of m. jannaschii aspartate2 transcarbamoylase
74d1dxha1



not modelled 11.4 15
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
75c3gd5D_



not modelled 11.1 11
PDB header:transferase
Chain: D: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: crystal structure of ornithine carbamoyltransferase from gloeobacter2 violaceus
76d1p4da_



not modelled 11.1 12
Fold:Origin of replication-binding domain, RBD-like
Superfamily:Origin of replication-binding domain, RBD-like
Family:Relaxase domain
77d1tuga1



not modelled 10.9 15
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
78d1ekxa1



not modelled 10.7 15
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
79d2it9a1



not modelled 10.5 4
Fold:ssDNA-binding transcriptional regulator domain
Superfamily:ssDNA-binding transcriptional regulator domain
Family:PMN2A0962/syc2379c-like
80c4atuI_



not modelled 10.4 3
PDB header:hydrolase
Chain: I: PDB Molecule:neuronal migration protein doublecortin;
PDBTitle: human doublecortin n-dc repeat plus linker, and tubulin (2xrp) docked2 into an 8a cryo-em map of doublecortin-stabilised microtubules3 reconstructed in absence of kinesin
81d1pvva1



not modelled 10.4 13
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
82c3zf7a_



not modelled 10.2 13
PDB header:ribosome
Chain: A: PDB Molecule:
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
83d2nvna1



not modelled 10.0 21
Fold:ssDNA-binding transcriptional regulator domain
Superfamily:ssDNA-binding transcriptional regulator domain
Family:PMN2A0962/syc2379c-like
84c5kevB_



not modelled 9.9 14
PDB header:signaling protein
Chain: B: PDB Molecule:vtrc protein;
PDBTitle: vibrio parahaemolyticus vtra/vtrc complex
85c4oh7B_



not modelled 9.6 20
PDB header:transferase
Chain: B: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: crystal structure of ornithine carbamoyltransferase from brucella2 melitensis
86c5g1oF_



not modelled 9.6 6
PDB header:transferase
Chain: F: PDB Molecule:cad protein;
PDBTitle: aspartate transcarbamoylase domain of human cad in apo form
87c5ubaA_



not modelled 9.4 14
PDB header:rna binding protein
Chain: A: PDB Molecule:rna pseudouridylate synthase domain-containing protein 4;
PDBTitle: human rna pseudouridylate synthase domain containing 4
88d1mjda_



not modelled 9.3 3
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Doublecortin (DC)
Family:Doublecortin (DC)
89c1pg5A_



not modelled 9.2 15
PDB header:transferase
Chain: A: PDB Molecule:aspartate carbamoyltransferase;
PDBTitle: crystal structure of the unligated (t-state) aspartate2 transcarbamoylase from the extremely thermophilic archaeon sulfolobus3 acidocaldarius
90c5ilqA_



not modelled 9.2 6
PDB header:transferase
Chain: A: PDB Molecule:aspartate carbamoyltransferase;
PDBTitle: crystal structure of truncated unliganded aspartate transcarbamoylase2 from plasmodium falciparum
91c3l6tB_



not modelled 9.0 25
PDB header:hydrolase
Chain: B: PDB Molecule:mobilization protein trai;
PDBTitle: crystal structure of an n-terminal mutant of the plasmid pcu1 trai2 relaxase domain
92c1ortD_



not modelled 8.7 15
PDB header:transferase
Chain: D: PDB Molecule:ornithine transcarbamoylase;
PDBTitle: ornithine transcarbamoylase from pseudomonas aeruginosa
93c4a18N_



not modelled 8.3 8
PDB header:ribosome
Chain: N: PDB Molecule:rpl27;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with initiation2 factor 6. this file contains 26s rrna and proteins of molecule 1
94c3grfA_



not modelled 8.2 13
PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: x-ray structure of ornithine transcarbamoylase from giardia2 lamblia
95c5ip4E_



not modelled 8.2 8
PDB header:transferase
Chain: E: PDB Molecule:neuronal migration protein doublecortin;
PDBTitle: x-ray structure of the c-terminal domain of human doublecortin
96c1ml4A_



not modelled 8.1 17
PDB header:transferase
Chain: A: PDB Molecule:aspartate transcarbamoylase;
PDBTitle: the pala-liganded aspartate transcarbamoylase catalytic subunit from2 pyrococcus abyssi
97c3py7A_



not modelled 8.0 13
PDB header:viral protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein,paxillin ld1,protein e6
PDBTitle: crystal structure of full-length bovine papillomavirus oncoprotein e62 in complex with ld1 motif of paxillin at 2.3a resolution
98d1omha_



not modelled 8.0 12
Fold:Origin of replication-binding domain, RBD-like
Superfamily:Origin of replication-binding domain, RBD-like
Family:Relaxase domain
99c2otcA_



not modelled 7.9 17
PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: ornithine transcarbamoylase complexed with n-2 (phosphonacetyl)-l-ornithine

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