Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1291c_(-)_1445505_1445840
DateWed Jul 31 22:05:38 BST 2019
Unique Job ID99b5687ce01ad142
SequenceMFTRRFAASM ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:32.389 Y:33.951 Z:33.664
Model (left) based on template c6c3rB_
Top template information
PDB header:viral protein
Chain: B: PDB Molecule:cricket paralysis virus 1a protein;
PDBTitle: cricket paralysis virus rnai suppressor protein crpv-1a
Confidence and coverage
Confidence: 60.0% Coverage: 42%
47 residues ( 42% of your sequence) have been modelled with 60.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6c3rB_



60.0 19
PDB header:viral protein
Chain: B: PDB Molecule:cricket paralysis virus 1a protein;
PDBTitle: cricket paralysis virus rnai suppressor protein crpv-1a
2d2csua3



25.7 19
Fold:Flavodoxin-like
Superfamily:Succinyl-CoA synthetase domains
Family:Succinyl-CoA synthetase domains
3c2ekcA_



16.8 23
PDB header:lyase
Chain: A: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5
4d1mkea1



15.8 26
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Enabled/VASP homology 1 domain (EVH1 domain)
5c5k9xA_



15.8 24
PDB header:lyase
Chain: A: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase alpha chain from legionella2 pneumophila subsp. pneumophila
6c4rl6A_



14.9 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:saccharopine dehydrogenase;
PDBTitle: crystal structure of the q04l03_strp2 protein from streptococcus2 pneumoniae. northeast structural genomics consortium target spr105
7c4inaA_



14.8 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:saccharopine dehydrogenase;
PDBTitle: crystal structure of the q7mss8_wolsu protein from wolinella2 succinogenes. northeast structural genomics consortium target wsr35
8c5uqdA_



14.1 31
PDB header:oxidoreductase
Chain: A: PDB Molecule:dumpy: shorter than wild-type;
PDBTitle: dpy-21 in complex with fe(ii) and alpha-ketoglutarate
9c5tchG_



13.8 25
PDB header:lyase
Chain: G: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase from m. tuberculosis -2 ligand-free form, trpa-g66v mutant
10c2jd3B_



12.8 27
PDB header:dna binding protein
Chain: B: PDB Molecule:stbb protein;
PDBTitle: parr from plasmid pb171
11c3ss4C_



9.8 19
PDB header:hydrolase
Chain: C: PDB Molecule:glutaminase c;
PDBTitle: crystal structure of mouse glutaminase c, phosphate-bound form
12c5dggB_



9.5 27
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: central domain of uncharacterized lpg1148 protein from legionella2 pneumophila
13d2j9ga2



8.5 22
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
14c5us3A_



8.4 75
PDB header:de novo protein
Chain: A: PDB Molecule:heterogeneous-backbone variant of the sp1-3 zinc finger: n-
PDBTitle: heterogeneous-backbone foldamer mimic of the sp1-3 zinc finger
15c3g2bA_



8.3 20
PDB header:biosynthetic protein
Chain: A: PDB Molecule:coenzyme pqq synthesis protein d;
PDBTitle: crystal structure of pqqd from xanthomonas campestris
16d1ulza2



7.8 19
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
17c2lweA_



7.8 7
PDB header:signaling protein
Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx58;
PDBTitle: solution structure of mutant (t170e) second card of human rig-i
18d1qcrd2



7.6 21
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Cytochrome bc1 domain
19c1apzB_



7.6 8
PDB header:complex (hydrolase/peptide)
Chain: B: PDB Molecule:aspartylglucosaminidase;
PDBTitle: human aspartylglucosaminidase complex with reaction product
20c1vjqB_



7.5 42
PDB header:structural genomics, de novo protein
Chain: B: PDB Molecule:designed protein;
PDBTitle: designed protein based on backbone conformation of2 procarboxypeptidase-a (1aye) with sidechains chosen for maximal3 predicted stability.
21c4y7iB_



not modelled 7.5 21
PDB header:hydrolase
Chain: B: PDB Molecule:myotubularin-related protein 8;
PDBTitle: crystal structure of mtmr8
22d2drpa1



not modelled 7.5 55
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
23d1khda1



not modelled 7.2 3
Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
24c6fddC_



not modelled 7.2 23
PDB header:structural protein
Chain: C: PDB Molecule:whirlin;
PDBTitle: crystal structure of the hhd2 domain of whirlin
25c6jx3B_



not modelled 7.0 19
PDB header:peptide binding protein
Chain: B: PDB Molecule:tfub1;
PDBTitle: lasso peptide synthetase b1 complexed with the leader peptide
26c6driA_



not modelled 6.8 50
PDB header:immune system
Chain: A: PDB Molecule:acan1;
PDBTitle: nmr solution structure of acan1 from the ancylostoma caninum hookworm
27c3uo9B_



not modelled 6.6 19
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:glutaminase kidney isoform, mitochondrial;
PDBTitle: crystal structure of human gac in complex with glutamate and bptes
28d1zsqa2



not modelled 6.5 13
Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Myotubularin-like phosphatases
29c2gacD_



not modelled 6.5 17
PDB header:hydrolase
Chain: D: PDB Molecule:glycosylasparaginase;
PDBTitle: t152c mutant glycosylasparaginase from flavobacterium2 meningosepticum
30c5uqeB_



not modelled 6.3 19
PDB header:hydrolase
Chain: B: PDB Molecule:glutaminase kidney isoform, mitochondrial;
PDBTitle: multidomain structure of human kidney-type glutaminase(kga/gls)
31d1xoda1



not modelled 6.3 27
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Enabled/VASP homology 1 domain (EVH1 domain)
32c5kzmA_



not modelled 6.3 26
PDB header:lyase
Chain: A: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase alpha-beta chain complex from2 francisella tularensis
33c5e8jC_



not modelled 6.2 67
PDB header:translation
Chain: C: PDB Molecule:rnmt-activating mini protein;
PDBTitle: crystal structure of mrna cap guanine-n7 methyltransferase in complex2 with ram
34d1bbua1



not modelled 6.2 46
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Anticodon-binding domain
35c1bonB_



not modelled 6.1 23
PDB header:hormone
Chain: B: PDB Molecule:bombyxin-ii,bombyxin a-6;
PDBTitle: three-dimensional structure of bombyxin-ii, an insulin-2 related brain-secretory peptide of the silkmoth bombyx3 mori: comparison with insulin and relaxin
36c4yajA_



not modelled 6.0 19
PDB header:ligase
Chain: A: PDB Molecule:alpha subunit of acetyl-coenzyme a synthetase
PDBTitle: ca. korarchaeum cryptofilum dinucleotide forming acetyl-coenzyme a2 synthetase 1 (apo form)
37c5l78A_



not modelled 5.9 30
PDB header:oxidoreductase
Chain: A: PDB Molecule:alpha-aminoadipic semialdehyde synthase, mitochondrial;
PDBTitle: crystal structure of human aminoadipate semialdehyde synthase,2 saccharopine dehydrogenase domain (in nad+ bound form)
38c2md0A_



not modelled 5.8 50
PDB header:immune system
Chain: A: PDB Molecule:ack1;
PDBTitle: solution structure of shk-like immunomodulatory peptide from2 ancylostoma caninum (hookworm)
39c4v19S_



not modelled 5.8 6
PDB header:ribosome
Chain: S: PDB Molecule:mitoribosomal protein ul18m, mrpl18;
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 12 of 2
40d1e1oa1



not modelled 5.5 38
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Anticodon-binding domain
41c2l5yA_



not modelled 5.4 13
PDB header:signaling protein
Chain: A: PDB Molecule:stromal interaction molecule 2;
PDBTitle: nmr structure of calcium-loaded stim2 ef-sam.
42c1bomB_



not modelled 5.4 23
PDB header:insulin-like brain-secretory peptide
Chain: B: PDB Molecule:bombyxin-ii,bombyxin a-6;
PDBTitle: three-dimensional structure of bombyxin-ii, an insulin-2 related brain-secretory peptide of the silkmoth bombyx3 mori: comparison with insulin and relaxin
43d1p9sa_



not modelled 5.4 57
Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral cysteine protease of trypsin fold
44d2duca1



not modelled 5.3 57
Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral cysteine protease of trypsin fold
45c3vndD_



not modelled 5.3 18
PDB header:lyase
Chain: D: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase alpha-subunit from the2 psychrophile shewanella frigidimarina k14-2
46c5kinC_



not modelled 5.2 24
PDB header:lyase
Chain: C: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase alpha beta complex from2 streptococcus pneumoniae
47c5v1uB_



not modelled 5.1 11
PDB header:protein binding
Chain: B: PDB Molecule:tbib1;
PDBTitle: tbib1 in complex with the tbia(beta) leader peptide
48d1z1va1



not modelled 5.1 13
Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain

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Transmembrane helix prediction 

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