Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1309_(atpG)_1464890_1465807
DateWed Jul 31 22:05:40 BST 2019
Unique Job ID5cf4a56db2a5ba84
SequenceMAATLRELRG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:60.642 Y:42.352 Z:115.932
Model (left) based on template c6fkig_
Top template information
PDB header:membrane protein
Chain: G: PDB Molecule:atp synthase subunit c, chloroplastic;
PDBTitle: chloroplast f1fo conformation 3
Confidence and coverage
Confidence:100.0% Coverage: 93%
284 residues ( 93% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6fkig_



100.0 36
PDB header:membrane protein
Chain: G: PDB Molecule:atp synthase subunit c, chloroplastic;
PDBTitle: chloroplast f1fo conformation 3
2c3oaaO_



100.0 35
PDB header:hydrolase/transport protein
Chain: O: PDB Molecule:atp synthase gamma chain;
PDBTitle: structure of the e.coli f1-atp synthase inhibited by subunit epsilon
3c6q45G_



100.0 35
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase gamma chain;
PDBTitle: f1-atpase from fusobacterium nucleatum
4c5dn6G_



100.0 37
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase gamma chain;
PDBTitle: atp synthase from paracoccus denitrificans
5c6re1S_



100.0 27
PDB header:proton transport
Chain: S: PDB Molecule:atp synthase gamma chain, mitochondrial;
PDBTitle: cryo-em structure of polytomella f-atp synthase, rotary substate 2a,2 focussed refinement of f1 head and rotor
6c2w6hG_



100.0 31
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase subunit gamma, mitochondrial;
PDBTitle: low resolution structures of bovine mitochondrial f1-atpase during2 controlled dehydration: hydration state 4a.
7c5lqxG_



100.0 30
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase gamma subunit;
PDBTitle: structure of f-atpase from pichia angusta, state3
8c6f5dG_



100.0 21
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase gamma subunit;
PDBTitle: trypanosoma brucei f1-atpase
9c2xokG_



100.0 27
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase subunit gamma, mitochondrial;
PDBTitle: refined structure of yeast f1c10 atpase complex to 3 a resolution
10c4xd7G_



100.0 41
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase gamma chain;
PDBTitle: structure of thermophilic f1-atpase inhibited by epsilon subunit
11c5zwlG_



100.0 35
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase gamma chain;
PDBTitle: crystal structure of the gamma - epsilon complex of photosynthetic2 cyanobacterial f1-atpase
12c6focG_



100.0 88
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase gamma chain;
PDBTitle: f1-atpase from mycobacterium smegmatis
13d2jdig1



100.0 43
Fold:Pyruvate kinase C-terminal domain-like
Superfamily:ATP synthase (F1-ATPase), gamma subunit
Family:ATP synthase (F1-ATPase), gamma subunit
14d1fs0g_



100.0 33
Fold:Pyruvate kinase C-terminal domain-like
Superfamily:ATP synthase (F1-ATPase), gamma subunit
Family:ATP synthase (F1-ATPase), gamma subunit
15c2qe7G_



100.0 39
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase subunit gamma;
PDBTitle: crystal structure of the f1-atpase from the thermoalkaliphilic2 bacterium bacillus sp. ta2.a1
16c2w6jG_



100.0 45
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase subunit gamma, mitochondrial;
PDBTitle: low resolution structures of bovine mitochondrial f1-atpase during2 controlled dehydration: hydration state 5.
17c3fksY_



100.0 33
PDB header:hydrolase
Chain: Y: PDB Molecule:atp synthase subunit gamma, mitochondrial;
PDBTitle: yeast f1 atpase in the absence of bound nucleotides
18d1mabg_



100.0 44
Fold:Pyruvate kinase C-terminal domain-like
Superfamily:ATP synthase (F1-ATPase), gamma subunit
Family:ATP synthase (F1-ATPase), gamma subunit
19c3re1B_



68.0 19
PDB header:lyase
Chain: B: PDB Molecule:uroporphyrinogen-iii synthetase;
PDBTitle: crystal structure of uroporphyrinogen iii synthase from pseudomonas2 syringae pv. tomato dc3000
20c4es6A_



52.3 23
PDB header:lyase
Chain: A: PDB Molecule:uroporphyrinogen-iii synthase;
PDBTitle: crystal structure of hemd (pa5259) from pseudomonas aeruginosa (pao1)2 at 2.22 a resolution
21c3k8vB_



not modelled 50.8 19
PDB header:structural protein
Chain: B: PDB Molecule:flagellin homolog;
PDBTitle: crysatl structure of a bacterial cell-surface flagellin n20c20
22d1wd7a_



not modelled 49.3 14
Fold:HemD-like
Superfamily:HemD-like
Family:HemD-like
23c3gitA_



not modelled 45.0 21
PDB header:transferase
Chain: A: PDB Molecule:carbon monoxide dehydrogenase/acetyl-coa synthase subunit
PDBTitle: crystal structure of a truncated acetyl-coa synthase
24d1ru3a_



not modelled 44.8 23
Fold:Prismane protein-like
Superfamily:Prismane protein-like
Family:Acetyl-CoA synthase
25d1oaoc_



not modelled 41.2 21
Fold:Prismane protein-like
Superfamily:Prismane protein-like
Family:Acetyl-CoA synthase
26c3d8tB_



not modelled 35.1 14
PDB header:lyase
Chain: B: PDB Molecule:uroporphyrinogen-iii synthase;
PDBTitle: thermus thermophilus uroporphyrinogen iii synthase
27c5vayF_



not modelled 33.1 28
PDB header:apoptosis
Chain: F: PDB Molecule:beclin-1;
PDBTitle: bcl-2 complex with beclin 1 t108d bh3 domain
28c5vayE_



not modelled 33.1 28
PDB header:apoptosis
Chain: E: PDB Molecule:beclin-1;
PDBTitle: bcl-2 complex with beclin 1 t108d bh3 domain
29c5vaxE_



not modelled 33.1 28
PDB header:apoptosis
Chain: E: PDB Molecule:beclin-1;
PDBTitle: bcl-2 complex with beclin 1 bh3 domain
30c6dcoD_



not modelled 30.3 28
PDB header:apoptosis
Chain: D: PDB Molecule:beclin-1;
PDBTitle: bcl-xl complex with beclin 1 bh3 domain t108d
31c5vb4D_



not modelled 30.1 28
PDB header:apoptosis
Chain: D: PDB Molecule:beclin-1;
PDBTitle: bcl-xl complex with beclin 1 bh3 domain t108d
32c5vaxG_



not modelled 30.0 28
PDB header:apoptosis
Chain: G: PDB Molecule:beclin-1;
PDBTitle: bcl-2 complex with beclin 1 bh3 domain
33c5vauF_



not modelled 28.7 28
PDB header:apoptosis
Chain: F: PDB Molecule:beclin-1;
PDBTitle: bcl-2 complex with beclin 1 bh3 domain
34d1qw2a_



not modelled 27.9 23
Fold:Hypothetical protein Ta1206
Superfamily:Hypothetical protein Ta1206
Family:Hypothetical protein Ta1206
35c6hr5A_



not modelled 27.1 20
PDB header:hydrolase
Chain: A: PDB Molecule:alpha-l-rhamnosidase/sulfatase (gh78);
PDBTitle: structure of the s1_25 family sulfatase module of the rhamnosidase2 fa22250 from formosa agariphila
36c2p1lB_



not modelled 26.3 28
PDB header:apoptosis
Chain: B: PDB Molecule:beclin 1;
PDBTitle: structure of the bcl-xl:beclin 1 complex
37c2p1lF_



not modelled 26.3 28
PDB header:apoptosis
Chain: F: PDB Molecule:beclin 1;
PDBTitle: structure of the bcl-xl:beclin 1 complex
38c2p1lD_



not modelled 26.3 28
PDB header:apoptosis
Chain: D: PDB Molecule:beclin 1;
PDBTitle: structure of the bcl-xl:beclin 1 complex
39c2p1lH_



not modelled 26.3 28
PDB header:apoptosis
Chain: H: PDB Molecule:beclin 1;
PDBTitle: structure of the bcl-xl:beclin 1 complex
40c5vauE_



not modelled 25.0 28
PDB header:apoptosis
Chain: E: PDB Molecule:beclin-1;
PDBTitle: bcl-2 complex with beclin 1 bh3 domain
41c5vaxF_



not modelled 25.0 28
PDB header:apoptosis
Chain: F: PDB Molecule:beclin-1;
PDBTitle: bcl-2 complex with beclin 1 bh3 domain
42c5vaxH_



not modelled 25.0 28
PDB header:apoptosis
Chain: H: PDB Molecule:beclin-1;
PDBTitle: bcl-2 complex with beclin 1 bh3 domain
43c3v47D_



not modelled 24.0 23
PDB header:immune system
Chain: D: PDB Molecule:flagellin;
PDBTitle: crystal structure of the n-terminal fragment of zebrafish tlr5 in2 complex with salmonella flagellin
44d1sfea2



not modelled 23.7 50
Fold:Ribonuclease H-like motif
Superfamily:Methylated DNA-protein cysteine methyltransferase domain
Family:Methylated DNA-protein cysteine methyltransferase domain
45c2zktB_



not modelled 22.2 18
PDB header:isomerase
Chain: B: PDB Molecule:2,3-bisphosphoglycerate-independent phosphoglycerate
PDBTitle: structure of ph0037 protein from pyrococcus horikoshii
46c3dvuD_



not modelled 21.8 28
PDB header:viral protein/apoptosis
Chain: D: PDB Molecule:beclin-1;
PDBTitle: crystal structure of the complex of murine gamma-herpesvirus 68 bcl-22 homolog m11 and the beclin 1 bh3 domain
47c5gz5A_



not modelled 21.5 15
PDB header:hydrolase
Chain: A: PDB Molecule:snake venom phosphodiesterase (pde);
PDBTitle: crystal structure of snake venom phosphodiesterase (pde) from taiwan2 cobra (naja atra atra) in complex with amp
48c3m8yC_



not modelled 21.3 23
PDB header:isomerase
Chain: C: PDB Molecule:phosphopentomutase;
PDBTitle: phosphopentomutase from bacillus cereus after glucose-1,6-bisphosphate2 activation
49c3lzcA_



not modelled 21.1 23
PDB header:biosynthetic protein
Chain: A: PDB Molecule:dph2;
PDBTitle: crystal structure of dph2 from pyrococcus horikoshii
50d2fefa1



not modelled 20.0 42
Fold:Bromodomain-like
Superfamily:PA2201 N-terminal domain-like
Family:PA2201 N-terminal domain-like
51c3dvuC_



not modelled 19.8 28
PDB header:viral protein/apoptosis
Chain: C: PDB Molecule:beclin-1;
PDBTitle: crystal structure of the complex of murine gamma-herpesvirus 68 bcl-22 homolog m11 and the beclin 1 bh3 domain
52d2pk8a1



not modelled 18.9 31
Fold:Hypothetical protein PF0899
Superfamily:Hypothetical protein PF0899
Family:Hypothetical protein PF0899
53c5gz4A_



not modelled 18.8 15
PDB header:hydrolase
Chain: A: PDB Molecule:snake venom phosphodiesterase (pde);
PDBTitle: crystal structure of snake venom phosphodiesterase (pde) from taiwan2 cobra (naja atra atra)
54c5i5fA_



not modelled 18.8 12
PDB header:membrane protein
Chain: A: PDB Molecule:inner membrane protein yejm;
PDBTitle: salmonella global domain 191
55c2kilA_



not modelled 18.6 14
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: nmr structure of the h103g mutant so2144 h-nox domain from2 shewanella oneidensis in the fe(ii)co ligation state
56c5xynC_



not modelled 17.9 17
PDB header:dna binding protein
Chain: C: PDB Molecule:suppressor of hu sensitivity involved in recombination
PDBTitle: the crystal structure of csm2-psy3-shu1-shu2 complex from budding2 yeast
57d1o98a2



not modelled 17.8 13
Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
58c2qzuA_



not modelled 17.5 10
PDB header:hydrolase
Chain: A: PDB Molecule:putative sulfatase yidj;
PDBTitle: crystal structure of the putative sulfatase yidj from bacteroides2 fragilis. northeast structural genomics consortium target bfr123
59c4b56A_



not modelled 16.7 17
PDB header:hydrolase
Chain: A: PDB Molecule:ectonucleotide pyrophosphatase/phosphodiesterase family
PDBTitle: structure of ectonucleotide pyrophosphatase-phosphodiesterase-12 (npp1)
60c1pqrA_



not modelled 16.4 71
PDB header:toxin
Chain: A: PDB Molecule:alpha-a-conotoxin eiva;
PDBTitle: solution conformation of alphaa-conotoxin eiva
61d1auka_



not modelled 15.9 15
Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:Arylsulfatase
62d1q77a_



not modelled 15.8 19
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
63c3opyB_



not modelled 15.8 16
PDB header:transferase
Chain: B: PDB Molecule:6-phosphofructo-1-kinase beta-subunit;
PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state
64c3opyH_



not modelled 15.8 16
PDB header:transferase
Chain: H: PDB Molecule:6-phosphofructo-1-kinase beta-subunit;
PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state
65c6c02B_



not modelled 15.6 7
PDB header:hydrolase
Chain: B: PDB Molecule:ectonucleotide pyrophosphatase/phosphodiesterase family
PDBTitle: human ectonucleotide pyrophosphatase / phosphodiesterase 3 (enpp3,2 npp3, cd203c), inactive (t205a), n594s, with alpha,beta-methylene-atp3 (ampcpp)
66c2dg2D_



not modelled 15.4 14
PDB header:protein binding
Chain: D: PDB Molecule:apolipoprotein a-i binding protein;
PDBTitle: crystal structure of mouse apolipoprotein a-i binding protein
67c3q3qA_



not modelled 15.3 13
PDB header:hydrolase
Chain: A: PDB Molecule:alkaline phosphatase;
PDBTitle: crystal structure of spap: an novel alkaline phosphatase from2 bacterium sphingomonas sp. strain bsar-1
68c4fdiA_



not modelled 15.1 19
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylgalactosamine-6-sulfatase;
PDBTitle: the molecular basis of mucopolysaccharidosis iv a
69c3ed4A_



not modelled 14.7 33
PDB header:transferase
Chain: A: PDB Molecule:arylsulfatase;
PDBTitle: crystal structure of putative arylsulfatase from escherichia coli
70d1fsua_



not modelled 14.6 11
Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:Arylsulfatase
71c4ug4H_



not modelled 14.4 10
PDB header:hydrolase
Chain: H: PDB Molecule:choline sulfatase;
PDBTitle: crystal structure of a choline sulfatase from sinorhizobium2 melliloti
72c3o3xA_



not modelled 14.2 24
PDB header:viral protein
Chain: A: PDB Molecule:gp41-5;
PDBTitle: crystal structure of gp41-5, a single-chain 5-helix-bundle based on2 hiv gp41
73c3b5qB_



not modelled 13.7 12
PDB header:hydrolase
Chain: B: PDB Molecule:putative sulfatase yidj;
PDBTitle: crystal structure of a putative sulfatase (np_810509.1) from2 bacteroides thetaiotaomicron vpi-5482 at 2.40 a resolution
74c2ponA_



not modelled 13.0 28
PDB header:apoptosis inhibitor
Chain: A: PDB Molecule:beclin-1;
PDBTitle: solution structure of the bcl-xl/beclin-1 complex
75c5jp6A_



not modelled 12.3 22
PDB header:hydrolase
Chain: A: PDB Molecule:putative polysaccharide deacetylase;
PDBTitle: bdellovibrio bacteriovorus peptidoglycan deacetylase bd3279
76d2gqfa1



not modelled 12.2 57
Fold:FAD/NAD(P)-binding domain
Superfamily:FAD/NAD(P)-binding domain
Family:HI0933 N-terminal domain-like
77d1kxpd3



not modelled 12.2 26
Fold:Serum albumin-like
Superfamily:Serum albumin-like
Family:Serum albumin-like
78c3lxqB_



not modelled 12.1 22
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein vp1736;
PDBTitle: the crystal structure of a protein in the alkaline phosphatase2 superfamily from vibrio parahaemolyticus to 1.95a
79d1m2da_



not modelled 12.0 24
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioredoxin-like 2Fe-2S ferredoxin
80c2w8dB_



not modelled 11.8 7
PDB header:transferase
Chain: B: PDB Molecule:processed glycerol phosphate lipoteichoic acid synthase 2;
PDBTitle: distinct and essential morphogenic functions for wall- and2 lipo-teichoic acids in bacillus subtilis
81c2iucB_



not modelled 11.8 17
PDB header:hydrolase
Chain: B: PDB Molecule:alkaline phosphatase;
PDBTitle: structure of alkaline phosphatase from the antarctic bacterium tab5
82c2xrgA_



not modelled 11.7 18
PDB header:hydrolase
Chain: A: PDB Molecule:ectonucleotide pyrophosphatase/phosphodiesterase family
PDBTitle: crystal structure of autotaxin (enpp2) in complex with the2 ha155 boronic acid inhibitor
83c5xhbA_



not modelled 11.7 45
PDB header:immune system
Chain: A: PDB Molecule:nisin immunity protein;
PDBTitle: crystal structure of the full length of nisi in a lipid free form, the2 nisin immunity protein, from lactococcus lactis
84d1hdha_



not modelled 11.3 15
Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:Arylsulfatase
85c4oydB_



not modelled 11.2 25
PDB header:viral protein/inhibitor
Chain: B: PDB Molecule:computationally designed inhibitor;
PDBTitle: crystal structure of a computationally designed inhibitor of an2 epstein-barr viral bcl-2 protein
86d1p49a_



not modelled 11.1 14
Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:Arylsulfatase
87c2m6rA_



not modelled 10.6 19
PDB header:electron transport
Chain: A: PDB Molecule:flavodoxin;
PDBTitle: apo_yqca
88c3k8wA_



not modelled 10.4 20
PDB header:structural protein
Chain: A: PDB Molecule:flagellin homolog;
PDBTitle: crysatl structure of a bacterial cell-surface flagellin n20c45
89c2xr9A_



not modelled 10.3 15
PDB header:hydrolase
Chain: A: PDB Molecule:ectonucleotide pyrophosphatase/phosphodiesterase family
PDBTitle: crystal structure of autotaxin (enpp2)
90c3o8nA_



not modelled 10.1 15
PDB header:transferase
Chain: A: PDB Molecule:6-phosphofructokinase, muscle type;
PDBTitle: structure of phosphofructokinase from rabbit skeletal muscle
91d1v10a3



not modelled 10.1 60
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Multidomain cupredoxins
92d2i09a1



not modelled 10.1 18
Fold:Alkaline phosphatase-like
Superfamily:Alkaline phosphatase-like
Family:DeoB catalytic domain-like
93d1l5oa_



not modelled 10.0 18
Fold:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Superfamily:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Family:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
94c2jmkA_



not modelled 9.8 22
PDB header:protein binding
Chain: A: PDB Molecule:hypothetical protein ta0956;
PDBTitle: solution structure of ta0956
95c1ihqA_



not modelled 9.7 31
PDB header:de novo protein
Chain: A: PDB Molecule:chimeric peptide glytm1bzip: tropomyosin alpha
PDBTitle: glytm1bzip: a chimeric peptide model of the n-terminus of a2 rat short alpha tropomyosin with the n-terminus encoded by3 exon 1b
96c4uplC_



not modelled 9.6 14
PDB header:hydrolase
Chain: C: PDB Molecule:sulfatase family protein;
PDBTitle: dimeric sulfatase spas2 from silicibacter pomeroyi
97c5fqlA_



not modelled 9.5 12
PDB header:hydrolase
Chain: A: PDB Molecule:iduronate-2-sulfatase;
PDBTitle: insights into hunter syndrome from the structure of iduronate-2-2 sulfatase
98c3opyG_



not modelled 9.5 13
PDB header:transferase
Chain: G: PDB Molecule:6-phosphofructo-1-kinase alpha-subunit;
PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state
99d1j33a_



not modelled 9.4 21
Fold:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Superfamily:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Family:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)

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Transmembrane helix prediction 

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