Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1332_(-)_1500932_1501588
DateWed Jul 31 22:05:43 BST 2019
Unique Job IDef0df10d3c73980b
SequenceMPPVCGRRCS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:32.505 Y:28.109 Z:26.916
Model (left) based on template c2kduB_
Top template information
PDB header:metal binding protein/exocytosis
Chain: B: PDB Molecule:protein unc-13 homolog a;
PDBTitle: structural basis of the munc13-1/ca2+-calmodulin2 interaction: a novel 1-26 calmodulin binding motif with a3 bipartite binding mode
Confidence and coverage
Confidence: 62.3% Coverage: 12%
26 residues ( 12% of your sequence) have been modelled with 62.3% confidence by the single highest scoring template.
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2kduB_



62.3 27
PDB header:metal binding protein/exocytosis
Chain: B: PDB Molecule:protein unc-13 homolog a;
PDBTitle: structural basis of the munc13-1/ca2+-calmodulin2 interaction: a novel 1-26 calmodulin binding motif with a3 bipartite binding mode
2c6hqaF_



23.0 31
PDB header:transcription
Chain: F: PDB Molecule:subunit (17 kda) of tfiid and saga complexes, involved in
PDBTitle: molecular structure of promoter-bound yeast tfiid
3c2ebkA_



23.0 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:rwd domain-containing protein 3;
PDBTitle: solution structure of the rwd domain of human rwd domain2 containing protein 3
4d1wgqa_



20.9 18
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Pleckstrin-homology domain (PH domain)
5d2dawa1



20.1 18
Fold:UBC-like
Superfamily:UBC-like
Family:RWD domain
6d1qqga1



18.0 27
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Phosphotyrosine-binding domain (PTB)
7d2elba2



16.5 27
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Pleckstrin-homology domain (PH domain)
8c5j1hB_



15.6 24
PDB header:structural protein
Chain: B: PDB Molecule:plectin,plectin;
PDBTitle: structure of the spectrin repeats 5 and 6 of the plakin domain of2 plectin
9c5todD_



13.3 44
PDB header:lipid transport
Chain: D: PDB Molecule:transmembrane protein 24;
PDBTitle: transmembrane protein 24 smp domain
10d2daxa1



13.1 8
Fold:UBC-like
Superfamily:UBC-like
Family:RWD domain
11c2jo7A_



12.3 38
PDB header:surface active protein
Chain: A: PDB Molecule:glycosylphosphatidylinositol-anchored merozoite
PDBTitle: solution structure of the adhesion protein bd37 from2 babesia divergens
12c5hwiA_



11.5 38
PDB header:transferase
Chain: A: PDB Molecule:glutathione-specific gamma-glutamylcyclotransferase;
PDBTitle: crystal structure of selenomethionine labelled gama glutamyl2 cyclotransferease specific to glutathione from yeast
13d1x1ga1



10.9 27
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Pleckstrin-homology domain (PH domain)
14d1u5fa1



10.7 23
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Pleckstrin-homology domain (PH domain)
15d1ddfa_



10.5 11
Fold:DEATH domain
Superfamily:DEATH domain
Family:DEATH domain, DD
16c2wsc1_



10.0 22
PDB header:photosynthesis
Chain: 1: PDB Molecule:at3g54890;
PDBTitle: improved model of plant photosystem i
17c3nsuA_



9.6 13
PDB header:signaling protein
Chain: A: PDB Molecule:phosphatidylinositol 4,5-bisphosphate-binding protein slm1;
PDBTitle: a systematic screen for protein-lipid interactions in saccharomyces2 cerevisiae
18c3cqcA_



9.4 19
PDB header:protein transport
Chain: A: PDB Molecule:nuclear pore complex protein nup107;
PDBTitle: nucleoporin nup107/nup133 interaction complex
19c2ws94_



9.4 60
PDB header:virus
Chain: 4: PDB Molecule:p1;
PDB Fragment:capsid protein vp4, residues 1-80 PDBTitle: equine rhinitis a virus at low ph
20c3fybA_



9.4 30
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein of unknown function (duf1244);
PDBTitle: crystal structure of a protein of unknown function (duf1244) from2 alcanivorax borkumensis
21c4cwlv_



not modelled 9.2 60
PDB header:virus
Chain: V: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
22c4cwlx_



not modelled 9.2 60
PDB header:virus
Chain: X: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
23c4cwlI_



not modelled 9.2 60
PDB header:virus
Chain: I: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
24c4cwlo_



not modelled 9.2 60
PDB header:virus
Chain: O: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
25c4cwlq_



not modelled 9.2 60
PDB header:virus
Chain: Q: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
26c4cwlG_



not modelled 9.2 60
PDB header:virus
Chain: G: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
27c4cwlK_



not modelled 9.2 60
PDB header:virus
Chain: K: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
28c4cwlB_



not modelled 9.2 60
PDB header:virus
Chain: B: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
29c4cwl2_



not modelled 9.2 60
PDB header:virus
Chain: 2: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
30c4cwlD_



not modelled 9.2 60
PDB header:virus
Chain: D: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
31c4cwlf_



not modelled 9.2 60
PDB header:virus
Chain: F: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
32c4cwlb_



not modelled 9.2 60
PDB header:virus
Chain: B: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
33c4cwl7_



not modelled 9.2 60
PDB header:virus
Chain: 7: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
34c4cwlk_



not modelled 9.2 60
PDB header:virus
Chain: K: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
35c4cwl9_



not modelled 9.2 60
PDB header:virus
Chain: 9: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
36c4cwlg_



not modelled 9.2 60
PDB header:virus
Chain: G: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
37c4cwl0_



not modelled 9.2 60
PDB header:virus
Chain: 0: PDB Molecule:
PDB Fragment:residues 1-80 PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
38c4cwl8_



not modelled 9.2 60
PDB header:virus
Chain: 8: PDB Molecule:
PDB Fragment:residues 1-80 PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
39c4cwlF_



not modelled 9.2 60
PDB header:virus
Chain: F: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
40c4cwlA_



not modelled 9.2 60
PDB header:virus
Chain: A: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
41c4cwlu_



not modelled 9.2 60
PDB header:virus
Chain: U: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
42c4cwlM_



not modelled 9.2 60
PDB header:virus
Chain: M: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
43c4cwlV_



not modelled 9.2 60
PDB header:virus
Chain: V: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
44c4cwlm_



not modelled 9.2 60
PDB header:virus
Chain: M: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
45c4cwlS_



not modelled 9.2 60
PDB header:virus
Chain: S: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
46c4cwlN_



not modelled 9.2 60
PDB header:virus
Chain: N: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
47c4cwlU_



not modelled 9.2 60
PDB header:virus
Chain: U: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
48c4cwlL_



not modelled 9.2 60
PDB header:virus
Chain: L: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
49c4cwli_



not modelled 9.2 60
PDB header:virus
Chain: I: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
50c4cwlX_



not modelled 9.2 60
PDB header:virus
Chain: X: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
51c4cwlt_



not modelled 9.2 60
PDB header:virus
Chain: T: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
52c4cwl5_



not modelled 9.2 60
PDB header:virus
Chain: 5: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
53c4cwlp_



not modelled 9.2 60
PDB header:virus
Chain: P: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
54c4cwld_



not modelled 9.2 60
PDB header:virus
Chain: D: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
55c4cwle_



not modelled 9.2 60
PDB header:virus
Chain: E: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
56c4cwlQ_



not modelled 9.2 60
PDB header:virus
Chain: Q: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
57c4cwlr_



not modelled 9.2 60
PDB header:virus
Chain: R: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
58c4cwlP_



not modelled 9.2 60
PDB header:virus
Chain: P: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
59c4cwlw_



not modelled 9.2 60
PDB header:virus
Chain: W: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
60c4cwlH_



not modelled 9.2 60
PDB header:virus
Chain: H: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
61c4cwlZ_



not modelled 9.2 60
PDB header:virus
Chain: Z: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
62c4cwlC_



not modelled 9.2 60
PDB header:virus
Chain: C: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
63c4cwlT_



not modelled 9.2 60
PDB header:virus
Chain: T: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
64c4cwlO_



not modelled 9.2 60
PDB header:virus
Chain: O: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
65c4cwl4_



not modelled 9.2 60
PDB header:virus
Chain: 4: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
66c4cwlc_



not modelled 9.2 60
PDB header:virus
Chain: C: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
67c4cwlJ_



not modelled 9.2 60
PDB header:virus
Chain: J: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
68c4cwlE_



not modelled 9.2 60
PDB header:virus
Chain: E: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
69c4cwla_



not modelled 9.2 60
PDB header:virus
Chain: A: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
70c4cwlR_



not modelled 9.2 60
PDB header:virus
Chain: R: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
71c4cwls_



not modelled 9.2 60
PDB header:virus
Chain: S: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
72c4cwll_



not modelled 9.2 60
PDB header:virus
Chain: L: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
73c4cwl3_



not modelled 9.2 60
PDB header:virus
Chain: 3: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
74c4cwlh_



not modelled 9.2 60
PDB header:virus
Chain: H: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
75c4cwl6_



not modelled 9.2 60
PDB header:virus
Chain: 6: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
76c4cwl1_



not modelled 9.2 60
PDB header:virus
Chain: 1: PDB Molecule:
PDB Fragment:residues 1-80 PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
77c4cwln_



not modelled 9.2 60
PDB header:virus
Chain: N: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
78c4cwlW_



not modelled 9.2 60
PDB header:virus
Chain: W: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
79c4cwlY_



not modelled 9.2 60
PDB header:virus
Chain: Y: PDB Molecule:
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
80c2wff4_



not modelled 9.2 60
PDB header:virus
Chain: 4: PDB Molecule:p1;
PDB Fragment:capsid protein vp4, residues 1-80 PDBTitle: equine rhinitis a virus
81c4cwlj_



not modelled 9.2 60
PDB header:virus
Chain: J: PDB Molecule:p1;
PDBTitle: the limits of structural plasticity in a picornavirus2 capsid revealed by a massively expanded equine rhinitis a3 virus particle
82d2daya1



not modelled 9.1 23
Fold:UBC-like
Superfamily:UBC-like
Family:RWD domain
83d1u5da1



not modelled 9.0 20
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Pleckstrin-homology domain (PH domain)
84c2xbo4_



not modelled 8.9 60
PDB header:virus
Chain: 4: PDB Molecule:p1;
PDB Fragment:capsid protein vp4, residues 1-80 PDBTitle: equine rhinitis a virus in complex with its sialic acid2 receptor
85d1ukxa_



not modelled 8.9 17
Fold:UBC-like
Superfamily:UBC-like
Family:RWD domain
86c2dhiA_



not modelled 8.2 31
PDB header:signaling protein
Chain: A: PDB Molecule:pleckstrin homology domain-containing family b
PDBTitle: solution structure of the ph domain of evectin-2 from mouse
87c1wmvA_



not modelled 8.1 15
PDB header:oxidoreductase, apoptosis
Chain: A: PDB Molecule:ww domain containing oxidoreductase;
PDBTitle: solution structure of the second ww domain of wwox
88c3pp2A_



not modelled 8.0 20
PDB header:hydrolase activator
Chain: A: PDB Molecule:rho gtpase-activating protein 27;
PDBTitle: crystal structure of the pleckstrin homology domain of arhgap27
89d2i5ua1



not modelled 7.9 19
Fold:DnaD domain-like
Superfamily:DnaD domain-like
Family:DnaD domain
90d1ie6a_



not modelled 7.7 56
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Spider toxins
91d1u29a1



not modelled 7.5 20
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Pleckstrin-homology domain (PH domain)
92c1u5fA_



not modelled 7.4 20
PDB header:signaling protein
Chain: A: PDB Molecule:src-associated adaptor protein;
PDBTitle: crystal structure of the ph domain of skap-hom with 8 vector-derived2 n-terminal residues
93c3enoC_



not modelled 7.4 16
PDB header:hydrolase/unknown function
Chain: C: PDB Molecule:uncharacterized protein pf2011;
PDBTitle: crystal structure of pyrococcus furiosus pcc1 in complex2 with thermoplasma acidophilum kae1
94d1l0wa2



not modelled 7.3 18
Fold:DCoH-like
Superfamily:GAD domain-like
Family:GAD domain
95d1tafa_



not modelled 7.2 46
Fold:Histone-fold
Superfamily:Histone-fold
Family:TBP-associated factors, TAFs
96d1unqa_



not modelled 6.9 21
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Pleckstrin-homology domain (PH domain)
97d1ghea_



not modelled 6.5 27
Fold:Acyl-CoA N-acyltransferases (Nat)
Superfamily:Acyl-CoA N-acyltransferases (Nat)
Family:N-acetyl transferase, NAT
98d1fgya_



not modelled 6.4 7
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Pleckstrin-homology domain (PH domain)
99c2mcfA_



not modelled 6.4 78
PDB header:unknown function
Chain: A: PDB Molecule:tgam_1934;
PDBTitle: nmr structure of tgam_1934

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