Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1342c_(-)_1508190_1508552
DateWed Jul 31 22:05:44 BST 2019
Unique Job ID04f0d962fa834630
SequenceMTAPETPAAQ ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:40.571 Y:33.067 Z:28.890
Model (left) based on template d1pgja1
Top template information
Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
Confidence and coverage
Confidence: 15.0% Coverage: 32%
38 residues ( 32% of your sequence) have been modelled with 15.0% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1pgja1



15.0 5
Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
2d2pgda1



14.2 22
Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
3c2p4qA_



12.1 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating 1;
PDBTitle: crystal structure analysis of gnd1 in saccharomyces cerevisiae
4c5zghL_



9.8 50
PDB header:photosynthesis
Chain: L: PDB Molecule:psal;
PDBTitle: cryo-em structure of the red algal psi-lhcr
5c6ithA_



9.0 26
PDB header:membrane protein
Chain: A: PDB Molecule:syndecan-2;
PDBTitle: structure of the transmembrane domain of syndecan 2 in micelles
6c6igzL_



8.5 40
PDB header:plant protein
Chain: L: PDB Molecule:psal;
PDBTitle: structure of psi-lhci
7c5dn6P_



8.2 3
PDB header:hydrolase
Chain: P: PDB Molecule:atp synthase f0 subcomplex c subunit;
PDBTitle: atp synthase from paracoccus denitrificans
8c6cfzG_



8.2 13
PDB header:nuclear protein
Chain: G: PDB Molecule:hsk3;
PDBTitle: structure of the dash/dam1 complex shows its role at the yeast2 kinetochore-microtubule interface
9c1pgqA_



7.8 22
PDB header:oxidoreductase (choh(d)-nadp+(a))
Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase;
PDBTitle: crystallographic study of coenzyme, coenzyme analogue and substrate2 binding in 6-phosphogluconate dehydrogenase: implications for nadp3 specificity and the enzyme mechanism
10d1jb0l_



7.4 38
Fold:Photosystem I reaction center subunit XI, PsaL
Superfamily:Photosystem I reaction center subunit XI, PsaL
Family:Photosystem I reaction center subunit XI, PsaL
11c2wpdP_



7.2 12
PDB header:hydrolase
Chain: P: PDB Molecule:atp synthase subunit 9, mitochondrial;
PDBTitle: the mg.adp inhibited state of the yeast f1c10 atp synthase
12c1skhA_



7.0 27
PDB header:unknown function
Chain: A: PDB Molecule:major prion protein 2;
PDBTitle: n-terminal (1-30) of bovine prion protein
13c1pgjA_



7.0 5
PDB header:oxidoreductase
Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase;
PDBTitle: x-ray structure of 6-phosphogluconate dehydrogenase from the protozoan2 parasite t. brucei
14c2o01L_



6.9 43
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem i reaction center subunit xi, chloroplast;
PDBTitle: the structure of a plant photosystem i supercomplex at 3.4 angstrom2 resolution
15c2x2vG_



5.9 12
PDB header:membrane protein
Chain: G: PDB Molecule:atp synthase subunit c;
PDBTitle: structural basis of a novel proton-coordination type in an2 f1fo-atp synthase rotor ring
16c6fqzB_



5.5 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating;
PDBTitle: plasmodium falciparum 6-phosphogluconate dehydrogenase in its apo2 form, in complex with its cofactor nadp+ and in complex with its3 substrate 6-phosphogluconate
17c6ijfA_



5.4 12
PDB header:antitoxin
Chain: A: PDB Molecule:tai4;
PDBTitle: crystal structure of the type vi effector-immunity complex (tae4-tai4)2 from agrobacterium tumefaciens

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below