Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1363c_(-)_1534613_1535398
DateWed Jul 31 22:05:46 BST 2019
Unique Job ID40a905c391135e15
SequenceMAETTEPPSD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:32.799 Y:31.025 Z:55.563
Model (left) based on template c5d9rA_
Top template information
PDB header:biosynthetic protein
Chain: A: PDB Molecule:protein accumulation and replication of chloroplasts 6,
PDBTitle: crystal structure of a conserved domain in the intermembrane space2 region of the plastid division protein arc6
Confidence and coverage
Confidence: 97.4% Coverage: 36%
95 residues ( 36% of your sequence) have been modelled with 97.4% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5d9rA_



97.4 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:protein accumulation and replication of chloroplasts 6,
PDBTitle: crystal structure of a conserved domain in the intermembrane space2 region of the plastid division protein arc6
2c5cnlA_



97.2 8
PDB header:protein transport
Chain: A: PDB Molecule:icml-like;
PDBTitle: crystal structure of an icml-like type iv secretion system protein2 (lpg0120) from legionella pneumophila subsp. pneumophila str.3 philadelphia 1 at 2.65 a resolution
3c5u9oD_



97.1 10
PDB header:cell cycle
Chain: D: PDB Molecule:plastid division protein cdp1, chloroplastic,plastid
PDBTitle: cocrystal structure of the intermembrane space region of the plastid2 division proteins parc6 and pdv1
4c3a76B_



97.1 10
PDB header:lyase
Chain: B: PDB Molecule:gamma-hexachlorocyclohexane dehydrochlorinase;
PDBTitle: the crystal structure of lina
5d2ux0a1



96.8 11
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A
6c3wz4F_



96.8 15
PDB header:unknown function
Chain: F: PDB Molecule:doti;
PDBTitle: structure of the periplasmic domain of doti (crystal form i)
7d3d9ra1



96.7 15
Fold:Cystatin-like
Superfamily:NTF2-like
Family:ECA1476-like
8c4nhfF_



96.3 12
PDB header:protein transport
Chain: F: PDB Molecule:trwg protein;
PDBTitle: crystal structure of the soluble domain of trwg type iv secretion2 machinery from bartonella grahamii
9d3b8la1



96.2 13
Fold:Cystatin-like
Superfamily:NTF2-like
Family:BaiE/LinA-like
10d3stda_



96.2 9
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Scytalone dehydratase
11d3ef8a1



96.2 18
Fold:Cystatin-like
Superfamily:NTF2-like
Family:BaiE/LinA-like
12d2cc3a1



96.1 18
Fold:Cystatin-like
Superfamily:NTF2-like
Family:VirB8-like
13c5i97C_



96.1 20
PDB header:protein transport
Chain: C: PDB Molecule:conjugal transfer protein;
PDBTitle: structural analysis and inhibition of trae from the pkm101 type iv2 secretion system
14c3wz3A_



96.0 12
PDB header:unknown function
Chain: A: PDB Molecule:tram protein;
PDBTitle: structure of a periplasmic fragment of tram
15d3cu3a1



95.9 11
Fold:Cystatin-like
Superfamily:NTF2-like
Family:BaiE/LinA-like
16c3h51A_



95.9 18
PDB header:protein binding
Chain: A: PDB Molecule:putative calcium/calmodulin dependent protein kinase ii
PDBTitle: crystal structure of putative calcium/calmodulin dependent protein2 kinase ii association domain (np_636218.1) from xanthomonas3 campestris at 1.70 a resolution
17d1hkxa_



95.9 11
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A
18c4i4kB_



95.9 10
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein sgcj;
PDBTitle: streptomyces globisporus c-1027 9-membered enediyne conserved protein2 sgce6
19c3gzrA_



95.7 14
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein with a ntf2-like fold;
PDBTitle: crystal structure of an uncharacterized protein with a cystatin-like2 fold (cc_2572) from caulobacter vibrioides at 1.40 a resolution
20d2rfra1



95.6 9
Fold:Cystatin-like
Superfamily:NTF2-like
Family:BaiE/LinA-like
21d1idpa_



not modelled 95.5 9
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Scytalone dehydratase
22c3robC_



not modelled 95.4 13
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:uncharacterized conserved protein;
PDBTitle: the crystal structure of a conserved protein from planctomyces2 limnophilus dsm 3776
23d2f86b1



not modelled 95.3 6
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A
24d3ebya1



not modelled 94.9 9
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ring hydroxylating beta subunit
25c4ovmE_



not modelled 94.7 10
PDB header:unknown function
Chain: E: PDB Molecule:uncharacterized protein sgcj;
PDBTitle: crystal structure of sgcj protein from streptomyces carzinostaticus
26c5ig4A_



not modelled 94.6 10
PDB header:transferase
Chain: A: PDB Molecule:predicted protein;
PDBTitle: crystal structure of n. vectensis camkii-a hub
27d2rgqa1



not modelled 94.5 15
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Rv3472-like
28c4lehA_



not modelled 94.5 10
PDB header:lyase
Chain: A: PDB Molecule:bile acid 7-alpha dehydratase, baie;
PDBTitle: crystal structure of a bile-acid 7-alpha dehydratase (closci_03134)2 from clostridium scindens atcc 35704 at 2.90 a resolution
29c4gb5A_



not modelled 94.2 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of kfla4162 protein from kribbella flavida
30d3b7ca1



not modelled 93.7 11
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SO0125-like
31d2bhma1



not modelled 93.4 14
Fold:Cystatin-like
Superfamily:NTF2-like
Family:VirB8-like
32d2chca1



not modelled 93.1 11
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Rv3472-like
33c2bhmE_



not modelled 93.1 14
PDB header:bacterial protein
Chain: E: PDB Molecule:type iv secretion system protein virb8;
PDBTitle: crystal structure of virb8 from brucella suis
34c3f7sA_



not modelled 92.5 9
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized ntf2-like protein;
PDBTitle: crystal structure of a ntf2-like protein of unknown function (pp_4556)2 from pseudomonas putida kt2440 at 2.11 a resolution
35d2b1xb1



not modelled 92.4 15
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ring hydroxylating beta subunit
36c4meiA_



not modelled 91.1 12
PDB header:protein transport
Chain: A: PDB Molecule:virb8 protein;
PDBTitle: crystal structure of a virb8 type iv secretion system machinery2 soluble domain from bartonella tribocorum
37c3soyA_



not modelled 90.8 6
PDB header:membrane protein
Chain: A: PDB Molecule:ntf2-like superfamily protein;
PDBTitle: nuclear transport factor 2 (ntf2-like) superfamily protein from2 salmonella enterica subsp. enterica serovar typhimurium str. lt2
38c6of9G_



not modelled 90.4 13
PDB header:unknown function
Chain: G: PDB Molecule:camkii hub;
PDBTitle: structure of the chlamydamonas reinhardtii camkii hub homology domain
39d3ejva1



not modelled 90.0 13
Fold:Cystatin-like
Superfamily:NTF2-like
Family:BaiE/LinA-like
40c2gbxF_



not modelled 88.7 9
PDB header:oxidoreductase
Chain: F: PDB Molecule:biphenyl 2,3-dioxygenase beta subunit;
PDBTitle: crystal structure of biphenyl 2,3-dioxygenase from sphingomonas2 yanoikuyae b1 bound to biphenyl
41d3blza1



not modelled 88.5 8
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Sbal0622-like
42d2r4ia1



not modelled 87.0 11
Fold:Cystatin-like
Superfamily:NTF2-like
Family:CHU142-like
43c5ig5E_



not modelled 86.9 9
PDB header:transferase
Chain: E: PDB Molecule:camkii-b hub;
PDBTitle: crystal structure of n. vectensis camkii-b hub at ph 4.2
44c4o3vA_



not modelled 86.6 16
PDB header:protein transport
Chain: A: PDB Molecule:virb8-like protein of type iv secretion system;
PDBTitle: crystal structure of a virb8-like protein of type iv secretion system2 from rickettsia typhi
45c3hx8A_



not modelled 85.7 13
PDB header:isomerase
Chain: A: PDB Molecule:putative ketosteroid isomerase;
PDBTitle: crystal structure of putative ketosteroid isomerase (np_103587.1) from2 mesorhizobium loti at 1.45 a resolution
46c3bb9D_



not modelled 84.5 10
PDB header:unknown function
Chain: D: PDB Molecule:putative orphan protein;
PDBTitle: crystal structure of a putative ketosteroid isomerase (sfri_1973) from2 shewanella frigidimarina ncimb 400 at 1.80 a resolution
47c3k7cC_



not modelled 83.8 17
PDB header:protein binding
Chain: C: PDB Molecule:putative ntf2-like transpeptidase;
PDBTitle: crystal structure of putative ntf2-like transpeptidase (np_281412.1)2 from campylobacter jejuni at 2.00 a resolution
48c5ig0A_



not modelled 83.4 11
PDB header:transferase
Chain: A: PDB Molecule:camk/camk2 protein kinase;
PDBTitle: crystal structure of s. rosetta camkii hub
49c4hzbE_



not modelled 81.2 12
PDB header:hydrolase
Chain: E: PDB Molecule:putative periplasmic protein;
PDBTitle: crystal structure of the type vi semet effector-immunity complex tae3-2 tai3 from ralstonia pickettii
50c6bjuD_



not modelled 80.4 14
PDB header:unknown function
Chain: D: PDB Molecule:atzh;
PDBTitle: the structure of atzh: a little known member of the atrazine breakdown2 pathway
51d3cnxa1



not modelled 78.6 8
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SAV4671-like
52d3e99a1



not modelled 74.3 12
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ring hydroxylating beta subunit
53c3gwrA_



not modelled 73.9 12
PDB header:protein binding
Chain: A: PDB Molecule:putative calcium/calmodulin-dependent protein kinase type
PDBTitle: crystal structure of putative calcium/calmodulin-dependent protein2 kinase type ii association domain (yp_315894.1) from thiobacillus3 denitrificans atcc 25259 at 2.00 a resolution
54d3bb9a1



not modelled 72.7 10
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SO0125-like
55d2owpa1



not modelled 71.8 14
Fold:Cystatin-like
Superfamily:NTF2-like
Family:BxeB1374-like
56c2rsxA_



not modelled 71.3 32
PDB header:hydrolase inhibitor
Chain: A: PDB Molecule:uncharacterized protein yoeb;
PDBTitle: solution structure of isea, an inhibitor protein of dl-endopeptidases2 from bacillus subtilis
57c5uwaB_



not modelled 60.8 8
PDB header:transport protein
Chain: B: PDB Molecule:probable phospholipid-binding protein mlac;
PDBTitle: structure of e. coli phospholipid binding protein mlac
58c3kspA_



not modelled 58.6 13
PDB header:unknown function
Chain: A: PDB Molecule:calcium/calmodulin-dependent kinase ii association domain;
PDBTitle: crystal structure of a putative ca/calmodulin-dependent kinase ii2 association domain (exig_1688) from exiguobacterium sibiricum 255-153 at 2.59 a resolution
59c3fsdA_



not modelled 57.1 8
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ntf2-like protein of unknown function in nutrient uptake;
PDBTitle: crystal structure of ntf2-like protein of unknown function in nutrient2 uptake (yp_427473.1) from rhodospirillum rubrum atcc 11170 at 1.70 a3 resolution
60c3ub1C_



not modelled 56.8 13
PDB header:transport protein
Chain: C: PDB Molecule:orf13-like protein;
PDBTitle: ntf2 like protein involved in plasmid conjugation
61c3dukD_



not modelled 53.7 13
PDB header:unknown function
Chain: D: PDB Molecule:ntf2-like protein of unknown function;
PDBTitle: crystal structure of a ntf2-like protein of unknown function2 (mfla_0564) from methylobacillus flagellatus kt at 2.200 a resolution
62d1vqqa1



not modelled 45.7 13
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Penicillin binding protein 2a (PBP2A), N-terminal domain
63c2qguA_



not modelled 43.1 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:probable signal peptide protein;
PDBTitle: three-dimensional structure of the phospholipid-binding protein from2 ralstonia solanacearum q8xv73_ralsq in complex with a phospholipid at3 the resolution 1.53 a. northeast structural genomics consortium4 target rsr89
64c4ouqA_



not modelled 42.7 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a duf4783 family protein (bf1468) from2 bacteroides fragilis ych46 at 1.55 a resolution
65c4ce4i_



not modelled 41.1 16
PDB header:ribosome
Chain: I: PDB Molecule:mrpl9;
PDBTitle: 39s large subunit of the porcine mitochondrial ribosome
66c4orlA_



not modelled 40.8 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a duf4783 family protein (bacova_04304) from2 bacteroides ovatus atcc 8483 at 1.40 a resolution
67c1mwuA_



not modelled 37.2 13
PDB header:biosynthetic protein
Chain: A: PDB Molecule:penicillin-binding protein 2a;
PDBTitle: structure of methicillin acyl-penicillin binding protein 2a from2 methicillin resistant staphylococcus aureus strain 27r at 2.60 a3 resolution.
68c4fczB_



not modelled 29.9 15
PDB header:transport protein
Chain: B: PDB Molecule:toluene-tolerance protein;
PDBTitle: crystal structure of toluene-tolerance protein from pseudomonas putida2 (strain kt2440), northeast structural genomics consortium (nesg)3 target ppr99
69c3ke7A_



not modelled 27.3 19
PDB header:isomerase
Chain: A: PDB Molecule:putative ketosteroid isomerase;
PDBTitle: crystal structure of putative ketosteroid isomerase (yp_001303366.1)2 from parabacteroides distasonis atcc 8503 at 1.45 a resolution
70c3fkaD_



not modelled 26.7 15
PDB header:unknown function
Chain: D: PDB Molecule:uncharacterized ntf-2 like protein;
PDBTitle: crystal structure of a ntf-2 like protein of unknown function2 (spo1084) from silicibacter pomeroyi dss-3 at 1.69 a resolution
71c3hzpA_



not modelled 24.2 8
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ntf2-like protein of unknown function;
PDBTitle: crystal structure of ntf2-like protein of unknown function mn2a_05052 from prochlorococcus marinus (yp_291699.1) from prochlorococcus sp.3 natl2a at 1.40 a resolution
72c5djqN_



not modelled 23.7 25
PDB header:oxidoreductase
Chain: N: PDB Molecule:putative uncharacterized protein;
PDBTitle: the structure of cbb3 cytochrome oxidase.
73c5djqP_



not modelled 23.7 25
PDB header:oxidoreductase
Chain: P: PDB Molecule:putative uncharacterized protein;
PDBTitle: the structure of cbb3 cytochrome oxidase.
74c5djqO_



not modelled 23.7 25
PDB header:oxidoreductase
Chain: O: PDB Molecule:putative uncharacterized protein;
PDBTitle: the structure of cbb3 cytochrome oxidase.
75c5djqQ_



not modelled 23.7 25
PDB header:oxidoreductase
Chain: Q: PDB Molecule:putative uncharacterized protein;
PDBTitle: the structure of cbb3 cytochrome oxidase.
76d1ulib_



not modelled 22.6 9
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ring hydroxylating beta subunit
77c5ve9C_



not modelled 22.4 25
PDB header:protein binding
Chain: C: PDB Molecule:microtubule-actin cross-linking factor 1, isoforms 1/2/3/5;
PDBTitle: structure of hacf7 ef1-ef2-gar domains
78c3qk9B_



not modelled 20.9 10
PDB header:protein transport
Chain: B: PDB Molecule:mitochondrial import inner membrane translocase subunit
PDBTitle: yeast tim44 c-terminal domain complexed with cymal-3
79c4r4gA_



not modelled 20.5 8
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative lipoprotein ycda;
PDBTitle: crystal structure of a putative lipoprotein (ycda) from bacillus2 subtilis subsp. subtilis str. 168 at 2.62 a resolution
80c5wqhE_



not modelled 19.7 14
PDB header:isomerase
Chain: E: PDB Molecule:isomerase trt14;
PDBTitle: structure of fungal meroterpenoid isomerase trt14 complexed with2 substrate analog and endo-terretonin d
81d1v5ra1



not modelled 19.3 25
Fold:N domain of copper amine oxidase-like
Superfamily:GAS2 domain-like
Family:GAS2 domain
82c2n6uA_



not modelled 18.3 43
PDB header:unknown function
Chain: A: PDB Molecule:astexin2-dc4;
PDBTitle: solution study of astexin2-dc4
83c2pg1J_



not modelled 16.4 44
PDB header:structural protein
Chain: J: PDB Molecule:cytoplasmic dynein 1 intermediate chain 2;
PDBTitle: structural analysis of a cytoplasmic dynein light chain-2 intermediate chain complex
84c2pg1L_



not modelled 16.4 44
PDB header:structural protein
Chain: L: PDB Molecule:cytoplasmic dynein 1 intermediate chain 2;
PDBTitle: structural analysis of a cytoplasmic dynein light chain-2 intermediate chain complex
85d2cw9a1



not modelled 16.3 8
Fold:Cystatin-like
Superfamily:NTF2-like
Family:TIM44-like
86c5up5A_



not modelled 16.1 43
PDB header:de novo protein
Chain: A: PDB Molecule:ehee_rd1_0284;
PDBTitle: solution structure of the de novo mini protein ehee_rd1_0284
87c3r2cJ_



not modelled 16.0 20
PDB header:transcription/rna
Chain: J: PDB Molecule:30s ribosomal protein s10;
PDBTitle: crystal structure of antitermination factors nusb and nuse in complex2 with boxa rna
88c3efyB_



not modelled 15.0 9
PDB header:cell cycle
Chain: B: PDB Molecule:cif (cell cycle inhibiting factor);
PDBTitle: structure of the cyclomodulin cif from pathogenic2 escherichia coli
89c6f0kA_



not modelled 13.1 10
PDB header:membrane protein
Chain: A: PDB Molecule:cytochrome c family protein;
PDBTitle: alternative complex iii
90c2z8nB_



not modelled 12.7 25
PDB header:lyase
Chain: B: PDB Molecule:27.5 kda virulence protein;
PDBTitle: structural basis for the catalytic mechanism of phosphothreonine lyase
91d2rcda1



not modelled 12.1 16
Fold:Cystatin-like
Superfamily:NTF2-like
Family:BxeB1374-like
92c5x9jB_



not modelled 11.9 8
PDB header:isomerase
Chain: B: PDB Molecule:prhc;
PDBTitle: strucutre of prhc from penicillium brasilianum nbrc 6234
93c2ytxA_



not modelled 11.0 12
PDB header:rna binding protein
Chain: A: PDB Molecule:cold shock domain-containing protein e1;
PDBTitle: solution structure of the second cold-shock domain of the human2 kiaa0885 protein (unr protein)
94c2h3oA_



not modelled 10.8 40
PDB header:membrane protein
Chain: A: PDB Molecule:merf;
PDBTitle: structure of merft, a membrane protein with two trans-2 membrane helices
95c2mewA_



not modelled 10.6 15
PDB header:structural protein
Chain: A: PDB Molecule:30s ribosomal protein s10;
PDBTitle: solution structure of nuse (s10) from thermotoga maritima
96c5wdaL_



not modelled 10.6 9
PDB header:protein transport
Chain: L: PDB Molecule:general secretion pathway protein g;
PDBTitle: structure of the pulg pseudopilus
97c1wazA_



not modelled 10.5 38
PDB header:transport protein
Chain: A: PDB Molecule:merf;
PDBTitle: nmr structure determination of the bacterial mercury transporter,2 merf, in micelles
98c5ts4A_



not modelled 9.9 10
PDB header:de novo protein
Chain: A: PDB Molecule:denovo ntf2;
PDBTitle: crystal structure of a de novo designed protein with curved beta-sheet
99c2kncA_



not modelled 9.5 10
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex

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Transmembrane helix prediction 

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