Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1384_(carB)_1557107_1560454
DateWed Jul 31 22:05:49 BST 2019
Unique Job ID8c433e0a620fa500
SequenceVPRRTDLHHV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:79.243 Y:80.816 Z:80.764
Model (left) based on template c5douC_
Top template information
PDB header:ligase
Chain: C: PDB Molecule:carbamoyl-phosphate synthase [ammonia], mitochondrial;
PDBTitle: crystal structure of human carbamoyl phosphate synthetase i (cps1),2 ligand-bound form
Confidence and coverage
Confidence:100.0% Coverage: 93%
1040 residues ( 93% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5douC_
100.0 39
PDB header:ligase
Chain: C: PDB Molecule:carbamoyl-phosphate synthase [ammonia], mitochondrial;
PDBTitle: crystal structure of human carbamoyl phosphate synthetase i (cps1),2 ligand-bound form
2c1m6vE_
100.0 54
PDB header:ligase
Chain: E: PDB Molecule:carbamoyl phosphate synthetase large chain;
PDBTitle: crystal structure of the g359f (small subunit) point mutant of2 carbamoyl phosphate synthetase
3c5dotA_
100.0 39
PDB header:ligase
Chain: A: PDB Molecule:carbamoyl-phosphate synthase [ammonia], mitochondrial;
PDBTitle: crystal structure of human carbamoyl phosphate synthetase i (cps1),2 apo form
4c5vz0D_
100.0 20
PDB header:ligase
Chain: D: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of lactococcus lactis pyruvate carboxylase g746a2 mutant in complex with cyclic-di-amp
5c3u9sE_
100.0 17
PDB header:ligase
Chain: E: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit;
PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex
6c5cskB_
100.0 18
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: crystal structure of yeast acetyl-coa carboxylase, unbiotinylated
7c6g2dC_
100.0 18
PDB header:ligase
Chain: C: PDB Molecule:acetyl-coa carboxylase 1;
PDBTitle: citrate-induced acetyl-coa carboxylase (acc-cit) filament at 5.4 a2 resolution
8c3tw6B_
100.0 19
PDB header:ligase/activator
Chain: B: PDB Molecule:pyruvate carboxylase protein;
PDBTitle: structure of rhizobium etli pyruvate carboxylase t882a with the2 allosteric activator, acetyl coenzyme-a
9c3bg5C_
100.0 21
PDB header:ligase
Chain: C: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of staphylococcus aureus pyruvate carboxylase
10c4qslE_
100.0 21
PDB header:ligase
Chain: E: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of listeria monocytogenes pyruvate carboxylase
11c1w96B_
100.0 16
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase;
PDBTitle: crystal structure of biotin carboxylase domain of acetyl-2 coenzyme a carboxylase from saccharomyces cerevisiae in3 complex with soraphen a
12c4qslC_
100.0 21
PDB header:ligase
Chain: C: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of listeria monocytogenes pyruvate carboxylase
13c3hblA_
100.0 21
PDB header:ligase
Chain: A: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of s. aureus pyruvate carboxylase t908a mutant
14c5cslA_
100.0 17
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: crystal structure of the 500 kd yeast acetyl-coa carboxylase2 holoenzyme dimer
15c2hjwA_
100.0 19
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase 2;
PDBTitle: crystal structure of the bc domain of acc2
16c3g8cB_
100.0 21
PDB header:ligase
Chain: B: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of biotin carboxylase in complex with biotin,2 bicarbonate, adp and mg ion
17c2vpqA_
100.0 20
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: crystal structure of biotin carboxylase from s. aureus2 complexed with amppnp
18c3n6rK_
100.0 20
PDB header:ligase
Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit;
PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc)
19c3u9sA_
100.0 19
PDB header:ligase
Chain: A: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit;
PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex
20c1ulzA_
100.0 22
PDB header:ligase
Chain: A: PDB Molecule:pyruvate carboxylase n-terminal domain;
PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase
21c3ouzA_
not modelled 100.0 20
PDB header:ligase
Chain: A: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of biotin carboxylase-adp complex from campylobacter2 jejuni
22c5mlkA_
not modelled 100.0 21
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: biotin dependent carboxylase acca3 dimer from mycobacterium2 tuberculosis (rv3285)
23c2dzdB_
not modelled 100.0 21
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of the biotin carboxylase domain of pyruvate2 carboxylase
24c2gpwC_
not modelled 100.0 21
PDB header:ligase
Chain: C: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of the biotin carboxylase subunit, f363a2 mutant, of acetyl-coa carboxylase from escherichia coli.
25c3gidB_
not modelled 100.0 19
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coa carboxylase 2;
PDBTitle: the biotin carboxylase (bc) domain of human acetyl-coa carboxylase 22 (acc2) in complex with soraphen a
26c3u9sI_
not modelled 100.0 17
PDB header:ligase
Chain: I: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit;
PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex
27c5ks8B_
not modelled 100.0 21
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase subunit alpha;
PDBTitle: crystal structure of two-subunit pyruvate carboxylase from2 methylobacillus flagellatus
28d1a9xa5
not modelled 100.0 64
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
29c4rcnA_
not modelled 100.0 19
PDB header:ligase
Chain: A: PDB Molecule:long-chain acyl-coa carboxylase;
PDBTitle: structure and function of a single-chain, multi-domain long-chain2 acyl-coa carboxylase
30c5h80A_
not modelled 100.0 18
PDB header:ligase
Chain: A: PDB Molecule:carboxylase;
PDBTitle: biotin carboxylase domain of single-chain bacterial carboxylase
31c3jzfA_
not modelled 100.0 20
PDB header:ligase
Chain: A: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of biotin carboxylase from e. coli in2 complex with benzimidazoles series
32c5mlkB_
not modelled 100.0 21
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: biotin dependent carboxylase acca3 dimer from mycobacterium2 tuberculosis (rv3285)
33c1kjjA_
not modelled 100.0 16
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase 2;
PDBTitle: crystal structure of glycniamide ribonucleotide transformylase in2 complex with mg-atp-gamma-s
34c3va7A_
not modelled 100.0 17
PDB header:ligase
Chain: A: PDB Molecule:klla0e08119p;
PDBTitle: crystal structure of the kluyveromyces lactis urea carboxylase
35c4qskB_
not modelled 100.0 23
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of l. monocytogenes pyruvate carboxylase in complex2 with cyclic-di-amp
36c2qf7A_
not modelled 100.0 20
PDB header:ligase
Chain: A: PDB Molecule:pyruvate carboxylase protein;
PDBTitle: crystal structure of a complete multifunctional pyruvate carboxylase2 from rhizobium etli
37c5i8iD_
not modelled 100.0 18
PDB header:hydrolase
Chain: D: PDB Molecule:urea amidolyase;
PDBTitle: crystal structure of the k. lactis urea amidolyase
38c2xd4A_
not modelled 100.0 20
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: nucleotide-bound structures of bacillus subtilis glycinamide2 ribonucleotide synthetase
39c3lp8A_
not modelled 100.0 17
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine-glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine-glycine ligase from2 ehrlichia chaffeensis
40c2qk4A_
not modelled 100.0 19
PDB header:ligase
Chain: A: PDB Molecule:trifunctional purine biosynthetic protein adenosine-3;
PDBTitle: human glycinamide ribonucleotide synthetase
41d1a9xa6
not modelled 100.0 53
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
42c4hnvB_
not modelled 100.0 22
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of r54e mutant of s. aureus pyruvate carboxylase
43c2ip4A_
not modelled 100.0 20
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of glycinamide ribonucleotide synthetase from2 thermus thermophilus hb8
44c3bg5B_
not modelled 100.0 23
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of staphylococcus aureus pyruvate carboxylase
45c2yyaB_
not modelled 100.0 18
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of gar synthetase from aquifex aeolicus
46c1vkzA_
not modelled 100.0 17
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine--glycine ligase (tm1250) from2 thermotoga maritima at 2.30 a resolution
47c2ys6A_
not modelled 100.0 17
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylglycinamide synthetase;
PDBTitle: crystal structure of gar synthetase from geobacillus kaustophilus
48c3q2oB_
not modelled 100.0 19
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: crystal structure of purk: n5-carboxyaminoimidazole ribonucleotide2 synthetase
49d1a9xa1
not modelled 100.0 39
Fold:Carbamoyl phosphate synthetase, large subunit connection domain
Superfamily:Carbamoyl phosphate synthetase, large subunit connection domain
Family:Carbamoyl phosphate synthetase, large subunit connection domain
50c3orqA_
not modelled 100.0 15
PDB header:ligase,biosynthetic protein
Chain: A: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide synthetase;
PDBTitle: crystal structure of n5-carboxyaminoimidazole synthetase from2 staphylococcus aureus complexed with adp
51c3ax6C_
not modelled 100.0 17
PDB header:ligase
Chain: C: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: crystal structure of n5-carboxyaminoimidazole ribonucleotide2 synthetase from thermotoga maritima
52c1gsoA_
not modelled 100.0 19
PDB header:ligase
Chain: A: PDB Molecule:protein (glycinamide ribonucleotide synthetase);
PDBTitle: glycinamide ribonucleotide synthetase (gar-syn) from e.2 coli.
53c2dwcB_
not modelled 100.0 18
PDB header:transferase
Chain: B: PDB Molecule:433aa long hypothetical phosphoribosylglycinamide formyl
PDBTitle: crystal structure of probable phosphoribosylglycinamide formyl2 transferase from pyrococcus horikoshii ot3 complexed with adp
54c3vmmA_
not modelled 100.0 20
PDB header:ligase
Chain: A: PDB Molecule:alanine-anticapsin ligase bacd;
PDBTitle: crystal structure of bacd, an l-amino acid dipeptide ligase from2 bacillus subtilis
55c4mamB_
not modelled 100.0 15
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: the crystal structure of phosphoribosylaminoimidazole carboxylase2 atpase subunit of francisella tularensis subsp. tularensis schu s4 in3 complex with an adp analog, amp-cp
56c4dimA_
not modelled 100.0 15
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylglycinamide synthetase;
PDBTitle: crystal structure of phosphoribosylglycinamide synthetase from2 anaerococcus prevotii
57c4ffnA_
not modelled 100.0 20
PDB header:ligase/substrate
Chain: A: PDB Molecule:pylc;
PDBTitle: pylc in complex with d-ornithine and amppnp
58c3uvzB_
not modelled 100.0 16
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase, atpase2 subunit from burkholderia ambifaria
59c4wd3B_
not modelled 100.0 17
PDB header:ligase
Chain: B: PDB Molecule:l-amino acid ligase;
PDBTitle: crystal structure of an l-amino acid ligase riza
60c2r85B_
not modelled 100.0 18
PDB header:unknown function
Chain: B: PDB Molecule:purp protein pf1517;
PDBTitle: crystal structure of purp from pyrococcus furiosus complexed with amp
61c3k5iB_
not modelled 100.0 15
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosyl-aminoimidazole carboxylase;
PDBTitle: crystal structure of n5-carboxyaminoimidazole synthase from2 aspergillus clavatus in complex with adp and 5-aminoimadazole3 ribonucleotide
62c3aw8A_
not modelled 100.0 16
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: crystal structure of n5-carboxyaminoimidazole ribonucleotide2 synthetase from thermus thermophilus hb8
63c3etjB_
not modelled 100.0 12
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase
PDBTitle: crystal structure e. coli purk in complex with mg, adp, and2 pi
64c1ehiB_
not modelled 100.0 17
PDB header:ligase
Chain: B: PDB Molecule:d-alanine:d-lactate ligase;
PDBTitle: d-alanine:d-lactate ligase (lmddl2) of vancomycin-resistant2 leuconostoc mesenteroides
65c5vevB_
not modelled 100.0 18
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine-glycine ligase from neisseria2 gonorrhoeae
66c4fu0B_
not modelled 100.0 19
PDB header:ligase
Chain: B: PDB Molecule:d-alanine--d-alanine ligase 7;
PDBTitle: crystal structure of vang d-ala:d-ser ligase from enterococcus2 faecalis
67c3votB_
not modelled 100.0 16
PDB header:ligase
Chain: B: PDB Molecule:l-amino acid ligase, bl00235;
PDBTitle: crystal structure of l-amino acid ligase from bacillus licheniformis
68c3i12A_
not modelled 100.0 17
PDB header:ligase
Chain: A: PDB Molecule:d-alanine-d-alanine ligase a;
PDBTitle: the crystal structure of the d-alanyl-alanine synthetase a from2 salmonella enterica subsp. enterica serovar typhimurium str. lt2
69d1w96a3
not modelled 100.0 15
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
70c3lwbA_
not modelled 100.0 22
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of apo d-alanine:d-alanine ligase (ddl) from2 mycobacterium tuberculosis
71c2i80B_
not modelled 100.0 15
PDB header:ligase
Chain: B: PDB Molecule:d-alanine-d-alanine ligase;
PDBTitle: allosteric inhibition of staphylococcus aureus d-alanine:d-alanine2 ligase revealed by crystallographic studies
72c2dlnA_
not modelled 100.0 20
PDB header:ligase(peptidoglycan synthesis)
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine ligase at 2.32 angstroms resolution
73c1e4eB_
not modelled 100.0 19
PDB header:ligase
Chain: B: PDB Molecule:vancomycin/teicoplanin a-type resistance protein vana;
PDBTitle: d-alanyl-d-lacate ligase
74c6dgiA_
not modelled 100.0 14
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: the crystal structure of d-alanyl-alanine synthetase a from vibrio2 cholerae o1 biovar eltor str. n16961
75c2z04A_
not modelled 100.0 17
PDB header:lyase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase
PDBTitle: crystal structure of phosphoribosylaminoimidazole2 carboxylase atpase subunit from aquifex aeolicus
76c3e5nA_
not modelled 100.0 19
PDB header:ligase
Chain: A: PDB Molecule:d-alanine-d-alanine ligase a;
PDBTitle: crystal strucutre of d-alanine-d-alanine ligase from2 xanthomonas oryzae pv. oryzae kacc10331
77c3r23B_
not modelled 100.0 19
PDB header:ligase
Chain: B: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine--d-alanine ligase from bacillus2 anthracis
78c2pvpB_
not modelled 100.0 16
PDB header:ligase
Chain: B: PDB Molecule:d-alanine-d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase from helicobacter2 pylori
79c5dmxC_
not modelled 100.0 25
PDB header:ligase
Chain: C: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase from acinetobacter2 baumannii, space group p212121
80c4egqD_
not modelled 100.0 20
PDB header:ligase
Chain: D: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase b from burkholderia2 pseudomallei
81c3se7A_
not modelled 100.0 19
PDB header:ligase
Chain: A: PDB Molecule:vana;
PDBTitle: ancient vana
82c2zdqA_
not modelled 100.0 18
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine:d-alanine ligase with atp2 and d-alanine:d-alanine from thermus thermophius hb8
83c3k3pA_
not modelled 100.0 20
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of the apo form of d-alanine:d-alanine ligase (ddl)2 from streptococcus mutans
84d1a9xa3
not modelled 100.0 61
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
85c2pn1A_
not modelled 100.0 19
PDB header:ligase
Chain: A: PDB Molecule:carbamoylphosphate synthase large subunit;
PDBTitle: crystal structure of carbamoylphosphate synthase large subunit (split2 gene in mj) (zp_00538348.1) from exiguobacterium sp. 255-15 at 2.00 a3 resolution
86c3tqtB_
not modelled 100.0 16
PDB header:ligase
Chain: B: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: structure of the d-alanine-d-alanine ligase from coxiella burnetii
87c2yvqA_
not modelled 100.0 26
PDB header:ligase
Chain: A: PDB Molecule:carbamoyl-phosphate synthase;
PDBTitle: crystal structure of mgs domain of carbamoyl-phosphate2 synthetase from homo sapiens
88c4egjD_
not modelled 100.0 25
PDB header:ligase
Chain: D: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase from burkholderia2 xenovorans
89d1a9xa2
not modelled 100.0 31
Fold:Methylglyoxal synthase-like
Superfamily:Methylglyoxal synthase-like
Family:Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
90d2j9ga3
not modelled 100.0 22
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
91c4iwyA_
not modelled 100.0 18
PDB header:ligase
Chain: A: PDB Molecule:ribosomal protein s6 modification protein;
PDBTitle: semet-substituted rimk structure
92d1a9xa4
not modelled 100.0 70
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
93d1ulza3
not modelled 100.0 24
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
94c5ig9H_
not modelled 100.0 14
PDB header:ligase
Chain: H: PDB Molecule:atp grasp ligase;
PDBTitle: crystal structure of macrocyclase mdnc bound with precursor peptide2 mdna from microcystis aeruginosa mrc
95c3wvqA_
not modelled 100.0 16
PDB header:biosynthetic protein
Chain: A: PDB Molecule:pgm1;
PDBTitle: structure of atp grasp protein
96d1vkza3
not modelled 100.0 17
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
97c5i47A_
not modelled 100.0 23
PDB header:biosynthetic protein
Chain: A: PDB Molecule:rimk domain protein atp-grasp;
PDBTitle: crystal structure of rimk domain protein atp-grasp from sphaerobacter2 thermophilus dsm 20745
98d1kjqa3
not modelled 100.0 19
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
99c3df7A_
not modelled 100.0 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative atp-grasp superfamily protein;
PDBTitle: crystal structure of a putative atp-grasp superfamily protein from2 archaeoglobus fulgidus
100d2r7ka2
not modelled 100.0 22
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:PurP ATP-binding domain-like
101c3vpbC_
not modelled 100.0 16
PDB header:ligase
Chain: C: PDB Molecule:putative acetylornithine deacetylase;
PDBTitle: argx from sulfolobus tokodaii complexed with2 lysw/glu/adp/mg/zn/sulfate
102c5k2mG_
not modelled 100.0 18
PDB header:biosynthetic protein
Chain: G: PDB Molecule:rimk-related lysine biosynthesis protein;
PDBTitle: bifunctional lysx/argx from thermococcus kodakarensis with lysw-gamma-2 aaa
103c5ig8A_
not modelled 100.0 11
PDB header:ligase
Chain: A: PDB Molecule:atp grasp ligase;
PDBTitle: crystal structure of macrocyclase mdnb from microcystis aeruginosa mrc
104d3etja3
not modelled 100.0 12
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
105c1uc8B_
not modelled 100.0 24
PDB header:biosynthetic protein
Chain: B: PDB Molecule:lysine biosynthesis enzyme;
PDBTitle: crystal structure of a lysine biosynthesis enzyme, lysx,2 from thermus thermophilus hb8
106d1ehia2
not modelled 100.0 17
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:ATP-binding domain of peptide synthetases
107d2r85a2
not modelled 99.9 17
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:PurP ATP-binding domain-like
108d1iowa2
not modelled 99.9 19
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:ATP-binding domain of peptide synthetases
109d1e4ea2
not modelled 99.9 19
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:ATP-binding domain of peptide synthetases
110c1i7nA_
not modelled 99.9 14
PDB header:neuropeptide
Chain: A: PDB Molecule:synapsin ii;
PDBTitle: crystal structure analysis of the c domain of synapsin ii2 from rat brain
111d1gsoa3
not modelled 99.9 17
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
112c2p0aA_
not modelled 99.9 15
PDB header:neuropeptide
Chain: A: PDB Molecule:synapsin-3;
PDBTitle: the crystal structure of human synapsin iii (syn3) in complex with2 amppnp
113c1pk8D_
not modelled 99.9 13
PDB header:membrane protein
Chain: D: PDB Molecule:rat synapsin i;
PDBTitle: crystal structure of rat synapsin i c domain complexed to2 ca.atp
114c3ln6A_
not modelled 99.9 20
PDB header:ligase
Chain: A: PDB Molecule:glutathione biosynthesis bifunctional protein gshab;
PDBTitle: crystal structure of a bifunctional glutathione synthetase from2 streptococcus agalactiae
115d1uc8a2
not modelled 99.9 21
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:Lysine biosynthesis enzyme LysX ATP-binding domain
116c1z2pX_
not modelled 99.9 15
PDB header:transferase
Chain: X: PDB Molecule:inositol 1,3,4-trisphosphate 5/6-kinase;
PDBTitle: inositol 1,3,4-trisphosphate 5/6-kinase in complex with mg2+/amp-2 pcp/ins(1,3,4)p3
117c3ln7A_
not modelled 99.9 22
PDB header:ligase
Chain: A: PDB Molecule:glutathione biosynthesis bifunctional protein gshab;
PDBTitle: crystal structure of a bifunctional glutathione synthetase from2 pasteurella multocida
118d1wo8a1
not modelled 99.9 19
Fold:Methylglyoxal synthase-like
Superfamily:Methylglyoxal synthase-like
Family:Methylglyoxal synthase, MgsA
119c6f2cK_
not modelled 99.9 16
PDB header:lyase
Chain: K: PDB Molecule:methylglyoxal synthase;
PDBTitle: methylglyoxal synthase mgsa from bacillus subtilis
120d1pk8a2
not modelled 99.9 11
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:Synapsin C-terminal domain

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below