Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1404_(-)_1580597_1581079
DateWed Jul 31 22:05:51 BST 2019
Unique Job IDd69149102cd0a164
SequenceMMPTEYPATA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:40.532 Y:45.711 Z:56.654
Model (left) based on template c2nyxB_
Top template information
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404;
PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis
Confidence and coverage
Confidence: 99.9% Coverage: 92%
147 residues ( 92% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2nyxB_
99.9 99
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404;
PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis
2c3bj6B_
99.9 19
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcription regulator sp03579
3d1s3ja_
99.9 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
4c3k0lA_
99.9 18
PDB header:transcription regulator
Chain: A: PDB Molecule:repressor protein;
PDBTitle: crystal structure of putative marr family transcriptional2 regulator from acinetobacter sp. adp
5d1lnwa_
99.9 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
6c3bpxB_
99.9 19
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of marr
7c5eriA_
99.9 18
PDB header:transcription
Chain: A: PDB Molecule:marr family transcriptional regulator;
PDBTitle: marr protein from peptoclostridium difficile da00132
8c4xrfA_
99.9 27
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of mepr like protein complexed with pseudoligands
9c3bjaA_
99.9 20
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, marr family, putative;
PDBTitle: crystal structure of putative marr-like transcription regulator2 (np_978771.1) from bacillus cereus atcc 10987 at 2.38 a resolution
10c3zplE_
99.9 18
PDB header:transcription/dna
Chain: E: PDB Molecule:putative marr-family transcriptional repressor;
PDBTitle: crystal structure of sco3205, a marr family transcriptional regulator2 from streptomyces coelicolor, in complex with dna
11c3e6mD_
99.9 22
PDB header:transcription regulator
Chain: D: PDB Molecule:marr family transcriptional regulator;
PDBTitle: the crystal structure of a marr family transcriptional2 regulator from silicibacter pomeroyi dss.
12c4mnuA_
99.9 20
PDB header:transcription regulator
Chain: A: PDB Molecule:slya-like transcription regulator;
PDBTitle: crystal structure of uncharacterized slya-like transcription regulator2 from listeria monocytogenes
13c4fhtA_
99.9 19
PDB header:transcription
Chain: A: PDB Molecule:pcav transcriptional regulator;
PDBTitle: crystal structure of the pcav transcriptional regulator from2 streptomyces coelicolor in complex with its natural ligand
14c3nrvC_
99.9 19
PDB header:transcription regulator
Chain: C: PDB Molecule:putative transcriptional regulator (marr/emrr family);
PDBTitle: crystal structure of marr/emrr family transcriptional regulator from2 acinetobacter sp. adp1
15d2etha1
99.9 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
16d3broa1
99.9 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
17c3g3zA_
99.9 20
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: the structure of nmb1585, a marr family regulator from neisseria2 meningitidis
18c6jbxB_
99.9 17
PDB header:transcription/dna
Chain: B: PDB Molecule:fatty acid biosynthesis transcriptional regulator;
PDBTitle: crystal structure of streptococcus pneumoniae fabt in complex with dna
19d1lj9a_
99.9 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
20d2fbha1
99.9 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
21c3zmdD_
not modelled 99.9 24
PDB header:transcription
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of absc, a marr family transcriptional2 regulator from streptomyces coelicolor
22c3nqoB_
not modelled 99.9 18
PDB header:transcription
Chain: B: PDB Molecule:marr-family transcriptional regulator;
PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution
23c2gxgA_
not modelled 99.9 20
PDB header:transcription
Chain: A: PDB Molecule:146aa long hypothetical transcriptional regulator;
PDBTitle: crystal structure of emrr homolog from hyperthermophilic archaea2 sulfolobus tokodaii strain7
24c2qwwB_
not modelled 99.9 18
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution
25d2a61a1
not modelled 99.9 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
26d2fbia1
not modelled 99.9 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
27c2nnnB_
not modelled 99.9 26
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulator;
PDBTitle: crystal structure of probable transcriptional regulator from2 pseudomonas aeruginosa
28d2bv6a1
not modelled 99.9 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
29c4em1A_
not modelled 99.9 14
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator sar2349;
PDBTitle: staphylococcus aureus marr native
30c2rdpA_
not modelled 99.9 23
PDB header:transcription
Chain: A: PDB Molecule:putative transcriptional regulator marr;
PDBTitle: the structure of a marr family protein from bacillus2 stearothermophilus
31d1jgsa_
not modelled 99.9 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
32c5e1xA_
not modelled 99.9 16
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of the organohalide sensing rdhr-cbdba16252 transcriptional regulator in the 3,4-dichlorophenol bound form
33d1z91a1
not modelled 99.8 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
34c3cjnA_
not modelled 99.8 21
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of transcriptional regulator, marr family, from2 silicibacter pomeroyi
35c3f3xA_
not modelled 99.8 22
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family, putative;
PDBTitle: crystal structure of the transcriptional regulator bldr from2 sulfolobus solfataricus
36c5zc2B_
not modelled 99.8 14
PDB header:flavoprotein
Chain: B: PDB Molecule:p-hydroxyphenylacetate 3-hydroxylase, reductase component;
PDBTitle: acinetobacter baumannii p-hydroxyphenylacetate 3-hydroxylase (hpah),2 reductase component (c1)
37c5jlsA_
not modelled 99.8 16
PDB header:transcription
Chain: A: PDB Molecule:adhesin competence repressor;
PDBTitle: crystal structure of adhesin competence repressor (adcr) from2 streptococcus pyogenes (c-terminally his tagged)
38c3boqB_
not modelled 99.8 15
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcriptional regulator from2 silicibacter pomeroyi
39c3fm5D_
not modelled 99.8 18
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator;
PDBTitle: x-ray crystal structure of transcriptional regulator (marr family)2 from rhodococcus sp. rha1
40c2fa5B_
not modelled 99.8 21
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator marr/emrr family;
PDBTitle: the crystal structure of an unliganded multiple antibiotic-2 resistance repressor (marr) from xanthomonas campestris
41c3oopA_
not modelled 99.8 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lin2960 protein;
PDBTitle: the structure of a protein with unknown function from listeria innocua2 clip11262
42c4b8xB_
not modelled 99.8 24
PDB header:transcription
Chain: B: PDB Molecule:possible marr-transcriptional regulator;
PDBTitle: near atomic resolution crystal structure of sco5413, a marr family2 transcriptional regulator from streptomyces coelicolor
43c4yifE_
not modelled 99.8 22
PDB header:dna binding protein
Chain: E: PDB Molecule:marr family protein rv0880;
PDBTitle: crystal structure of rv0880
44c3cdhB_
not modelled 99.8 21
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of the marr family transcriptional regulator spo14532 from silicibacter pomeroyi dss-3
45c5hsmA_
not modelled 99.8 23
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator rv2887;
PDBTitle: crystal structure of mycobacterium tuberculosis marr family protein2 rv2887
46d2fbka1
not modelled 99.8 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
47c3s2wB_
not modelled 99.8 21
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: the crystal structure of a marr transcriptional regulator from2 methanosarcina mazei go1
48c2fxaB_
not modelled 99.8 11
PDB header:transcription
Chain: B: PDB Molecule:protease production regulatory protein hpr;
PDBTitle: structure of the protease production regulatory protein hpr from2 bacillus subtilis.
49c3hrmA_
not modelled 99.8 13
PDB header:transcription regulator
Chain: A: PDB Molecule:hth-type transcriptional regulator sarz;
PDBTitle: crystal structure of staphylococcus aureus protein sarz in sulfenic2 acid form
50c5aiqD_
not modelled 99.8 22
PDB header:transcription
Chain: D: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of ligand-free nadr
51c3kp3B_
not modelled 99.8 16
PDB header:transcription regulator/antibiotic
Chain: B: PDB Molecule:transcriptional regulator tcar;
PDBTitle: staphylococcus epidermidis in complex with ampicillin
52c2pexA_
not modelled 99.8 17
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator ohrr;
PDBTitle: structure of reduced c22s ohrr from xanthamonas campestris
53c3jw4C_
not modelled 99.8 11
PDB header:transcription regulator
Chain: C: PDB Molecule:transcriptional regulator, marr/emrr family;
PDBTitle: the structure of a putative marr family transcriptional regulator from2 clostridium acetobutylicum
54c3deuB_
not modelled 99.7 20
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator slya;
PDBTitle: crystal structure of transcription regulatory protein slya from2 salmonella typhimurium in complex with salicylate ligands
55d2hr3a1
not modelled 99.7 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
56c6c28C_
not modelled 99.7 26
PDB header:dna binding protein
Chain: C: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: transcriptional repressor, cour, bound to p-coumaroyl-coa
57c3ecoB_
not modelled 99.7 20
PDB header:transcription
Chain: B: PDB Molecule:mepr;
PDBTitle: crystal structure of mepr, a transcription regulator of the2 staphylococcus aureus multidrug efflux pump mepa
58d3deua1
not modelled 99.7 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
59c3bddD_
not modelled 99.7 18
PDB header:transcription
Chain: D: PDB Molecule:regulatory protein marr;
PDBTitle: crystal structure of a putative multiple antibiotic-resistance2 repressor (ssu05_1136) from streptococcus suis 89/1591 at 2.20 a3 resolution
60c4hblA_
not modelled 99.7 17
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of abfr of staphylococcus epidermidis
61c5jbrA_
not modelled 99.7 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bcav_2135;
PDBTitle: crystal structure of uncharacterized protein bcav_2135 from2 beutenbergia cavernae
62c5yhxH_
not modelled 99.7 20
PDB header:metal binding protein
Chain: H: PDB Molecule:zinc transport transcriptional regulator;
PDBTitle: structure of lactococcus lactis zitr, wild type
63c3tgnA_
not modelled 99.7 20
PDB header:transcription
Chain: A: PDB Molecule:adc operon repressor adcr;
PDBTitle: crystal structure of the zinc-dependent marr family transcriptional2 regulator adcr in the zn(ii)-bound state
64d2fxaa1
not modelled 99.7 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
65d1p4xa1
not modelled 99.7 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
66c4fx0A_
not modelled 99.7 23
PDB header:transcription regulator
Chain: A: PDB Molecule:probable transcriptional repressor protein;
PDBTitle: crystal structure of m. tuberculosis transcriptional regulator mosr
67d1ku9a_
not modelled 99.7 9
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:DNA-binding protein Mj223
68c4q77B_
not modelled 99.7 16
PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator rot;
PDBTitle: crystal structure of rot, a global regulator of virulence genes in2 staphylococcus aureus
69d1p4xa2
not modelled 99.7 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
70d2frha1
not modelled 99.7 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
71d1hsja1
not modelled 99.6 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
72c1p4xA_
not modelled 99.6 13
PDB header:transcription
Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue;
PDBTitle: crystal structure of sars protein from staphylococcus aureus
73c4nb5D_
not modelled 99.6 16
PDB header:dna binding protein
Chain: D: PDB Molecule:dna binding protein;
PDBTitle: crystal structure of a transcriptional regulator
74d1sfxa_
not modelled 99.6 12
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
75d1ub9a_
not modelled 99.5 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
76d1okra_
not modelled 99.4 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Penicillinase repressor
77c3r0aB_
not modelled 99.3 15
PDB header:transcription regulator
Chain: B: PDB Molecule:putative transcriptional regulator;
PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196)
78c2x4hA_
not modelled 99.3 14
PDB header:transcription
Chain: A: PDB Molecule:hypothetical protein sso2273;
PDBTitle: crystal structure of the hypothetical protein sso2273 from2 sulfolobus solfataricus
79c6cmvA_
not modelled 99.2 11
PDB header:gene regulation
Chain: A: PDB Molecule:transcriptional regulator lrs14-like protein;
PDBTitle: crystal structure of archaeal biofilm regulator (abfr2) from2 sulfolobus acidocaldarius
80c2it0A_
not modelled 99.2 17
PDB header:transcription/dna
Chain: A: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii
81d3ctaa1
not modelled 99.2 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
82c1f5tA_
not modelled 99.2 14
PDB header:transcription/dna
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: diphtheria tox repressor (c102d mutant) complexed with2 nickel and dtxr consensus binding sequence
83c2wteB_
not modelled 99.1 12
PDB header:antiviral protein
Chain: B: PDB Molecule:csa3;
PDBTitle: the structure of the crispr-associated protein, csa3, from2 sulfolobus solfataricus at 1.8 angstrom resolution.
84c1hsjA_
not modelled 99.1 12
PDB header:transcription/sugar binding protein
Chain: A: PDB Molecule:fusion protein consisting of staphylococcus accessory
PDBTitle: sarr mbp fusion structure
85c3ctaA_
not modelled 99.1 21
PDB header:transferase
Chain: A: PDB Molecule:riboflavin kinase;
PDBTitle: crystal structure of riboflavin kinase from thermoplasma acidophilum
86c1fx7C_
not modelled 99.0 17
PDB header:signaling protein
Chain: C: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of the iron-dependent regulator (ider) from2 mycobacterium tuberculosis
87c4o6jA_
not modelled 98.9 13
PDB header:metal binding protein
Chain: A: PDB Molecule:iron-dependent transcription repressor related protein;
PDBTitle: crystal sturucture of t. acidophilum ider
88c2h09A_
not modelled 98.9 20
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator mntr;
PDBTitle: crystal structure of diphtheria toxin repressor like protein2 from e. coli
89c2ev5B_
not modelled 98.8 17
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator mntr;
PDBTitle: bacillus subtilis manganese transport regulator (mntr)2 bound to calcium
90c1g3wA_
not modelled 98.8 15
PDB header:gene regulation
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: cd-cys102ser dtxr
91c5cviB_
not modelled 98.8 17
PDB header:transcription regulator
Chain: B: PDB Molecule:slor;
PDBTitle: structure of the manganese regulator slor
92d1sd4a_
not modelled 98.8 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Penicillinase repressor
93c3hruA_
not modelled 98.7 20
PDB header:transcription
Chain: A: PDB Molecule:metalloregulator scar;
PDBTitle: crystal structure of scar with bound zn2+
94c3f8fA_
not modelled 98.6 15
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, padr-like family;
PDBTitle: crystal structure of multidrug binding transcriptional regulator lmrr2 complexed with daunomycin
95d2d1ha1
not modelled 98.6 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
96d1xmaa_
not modelled 98.6 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PadR-like
97c1xmaA_
not modelled 98.6 16
PDB header:transcription
Chain: A: PDB Molecule:predicted transcriptional regulator;
PDBTitle: structure of a transcriptional regulator from clostridium thermocellum2 cth-833
98c3hhhA_
not modelled 98.6 12
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, padr family;
PDBTitle: crystal structure of transcriptional regulator, a member of padr2 family, from enterococcus faecalis v583
99c5zhcA_
not modelled 98.5 16
PDB header:dna binding protein
Chain: A: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of the padr-family transcriptional regulator rv34882 of mycobacterium tuberculosis h37rv
100c3l7wA_
not modelled 98.5 18
PDB header:transcription
Chain: A: PDB Molecule:putative uncharacterized protein smu.1704;
PDBTitle: the crystal structure of smu.1704 from streptococcus mutans ua159
101c2oqgA_
not modelled 98.4 18
PDB header:transcription
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: arsr-like transcriptional regulator from rhodococcus sp. rha1
102c3f6oB_
not modelled 98.3 15
PDB header:transcription regulator
Chain: B: PDB Molecule:probable transcriptional regulator, arsr family
PDBTitle: crystal structure of arsr family transcriptional regulator,2 rha00566
103c5dymA_
not modelled 98.2 15
PDB header:dna binding protein
Chain: A: PDB Molecule:padr-family transcriptional regulator;
PDBTitle: crystal structure of a padr family transcription regulator from2 hypervirulent clostridium difficile r20291 - cdpadr_0991 to 1.893 angstrom resolution
104c3f6vA_
not modelled 98.2 19
PDB header:transcription regulator
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: crystal structure of possible transcriptional regulator for arsenical2 resistance
105c6o5cB_
not modelled 98.2 15
PDB header:dna binding protein
Chain: B: PDB Molecule:putative metal-dependent transcriptional regulator;
PDBTitle: x-ray crystal structure of metal-dependent transcriptional regulator2 mtsr
106d2g9wa1
not modelled 98.2 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Penicillinase repressor
107c3cuoB_
not modelled 98.2 18
PDB header:transcription regulator
Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav;
PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli
108d1ulya_
not modelled 98.2 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Hypothetical protein PH1932
109c3ri2B_
not modelled 98.2 18
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, padr-like family;
PDBTitle: crystal structure of padr family transcriptional regulator from2 eggerthella lenta dsm 2243
110c4hqeB_
not modelled 98.1 18
PDB header:transcription/dna
Chain: B: PDB Molecule:transcriptional regulator qsrr;
PDBTitle: the crystal structure of qsrr-dna complex
111c4esbA_
not modelled 98.1 18
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, padr family;
PDBTitle: crystal structure of padr-like transcriptional regulator (bc4206) from2 bacillus cereus strain atcc 14579
112c2qufB_
not modelled 98.1 11
PDB header:transcription
Chain: B: PDB Molecule:transcription factor pf0095;
PDBTitle: crystal structure of transcription factor axxa-pf0095 from pyrococcus2 furiosus
113c6faqA_
not modelled 98.0 24
PDB header:dna binding protein
Chain: A: PDB Molecule:dna binding protein;
PDBTitle: structure of h. salinarum rosr (vng0258) grown from kbr
114c5h20A_
not modelled 98.0 14
PDB header:transcription regulator
Chain: A: PDB Molecule:putative padr-family transcriptional regulatory protein;
PDBTitle: x-ray structure of padr-like transcription factor from bacteroid2 fragilis
115d1z7ua1
not modelled 98.0 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
116d2esha1
not modelled 97.9 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PadR-like
117c6j05B_
not modelled 97.9 11
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
118c4a5mH_
not modelled 97.9 10
PDB header:transcription
Chain: H: PDB Molecule:uncharacterized hth-type transcriptional regulator yybr;
PDBTitle: redox regulator hypr in its oxidized form
119c6j0eB_
not modelled 97.9 24
PDB header:transcription
Chain: B: PDB Molecule:arsenic responsive repressor arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
120c5x11G_
not modelled 97.9 13
PDB header:transcription/dna
Chain: G: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of bacillus subtilis padr in complex with operator2 dna

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite