Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1440_(secG)_1617843_1618076
DateWed Jul 31 22:05:55 BST 2019
Unique Job ID686e21245ee32b84
SequenceMELALQITLI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:70.482 Y:26.200 Z:29.850
Model (left) based on template c2akiA_
Top template information
PDB header:protein transport
Chain: A: PDB Molecule:protein-export membrane protein secg;
PDBTitle: normal mode-based flexible fitted coordinates of a translocating2 secyeg protein-conducting channel into the cryo-em map of a secyeg-3 nascent chain-70s ribosome complex from e. coli
Confidence and coverage
Confidence: 98.2% Coverage:100%
77 residues (100% of your sequence) have been modelled with 98.2% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2akiA_



98.2 21
PDB header:protein transport
Chain: A: PDB Molecule:protein-export membrane protein secg;
PDBTitle: normal mode-based flexible fitted coordinates of a translocating2 secyeg protein-conducting channel into the cryo-em map of a secyeg-3 nascent chain-70s ribosome complex from e. coli
2c3dinE_



97.9 22
PDB header:membrane protein, protein transport
Chain: E: PDB Molecule:preprotein translocase subunit secg;
PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase
3c3dl8F_



97.5 28
PDB header:protein transport
Chain: F: PDB Molecule:protein-export membrane protein secg;
PDBTitle: structure of the complex of aquifex aeolicus secyeg and bacillus2 subtilis seca
4c5awwG_



87.8 20
PDB header:protein transport/immune system
Chain: G: PDB Molecule:putative preprotein translocase, secg subunit;
PDBTitle: precise resting state of thermus thermophilus secyeg
5c5uz5G_



11.7 71
PDB header:nuclear protein/rna
Chain: G: PDB Molecule:56 kda u1 small nuclear ribonucleoprotein component;
PDBTitle: s. cerevisiae u1 snrnp
6c2mxbA_



8.5 40
PDB header:membrane protein
Chain: A: PDB Molecule:erythropoietin receptor;
PDBTitle: structure of the transmembrane domain of the mouse erythropoietin2 receptor
7d1v54l_



8.1 14
Fold:Single transmembrane helix
Superfamily:Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
Family:Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
8c3iprC_



7.4 8
PDB header:transferase
Chain: C: PDB Molecule:pts system, iia component;
PDBTitle: crystal structure of the enterococcus faecalis gluconate2 specific eiia phosphotransferase system component
9d1pdoa_



7.1 27
Fold:PTS system fructose IIA component-like
Superfamily:PTS system fructose IIA component-like
Family:EIIA-man component-like
10c4tkzA_



6.9 36
PDB header:transferase
Chain: A: PDB Molecule:putative uncharacterized protein gbs1890;
PDBTitle: crystal structure of phosphotransferase system component eiia from2 streptococcus agalactiae
11c3hl6B_



6.9 24
PDB header:unknown function
Chain: B: PDB Molecule:pathogenicity island protein;
PDBTitle: staphylococcus aureus pathogenicity island 3 orf9 protein
12c2zvfG_



6.5 25
PDB header:ligase
Chain: G: PDB Molecule:alanyl-trna synthetase;
PDBTitle: crystal structure of archaeoglobus fulgidus alanyl-trna2 synthetase c-terminal dimerization domain
13c6fmgC_



6.4 25
PDB header:transferase
Chain: C: PDB Molecule:pts system mannose-specific transporter subunit iiab;
PDBTitle: structure of the mannose transporter iia domain from streptococcus2 pneumoniae
14c2lp1A_



6.3 23
PDB header:membrane protein
Chain: A: PDB Molecule:c99;
PDBTitle: the solution nmr structure of the transmembrane c-terminal domain of2 the amyloid precursor protein (c99)
15c1spfA_



6.1 38
PDB header:lipoprotein(surface film)
Chain: A: PDB Molecule:pulmonary surfactant-associated polypeptide c;
PDBTitle: the nmr structure of the pulmonary surfactant-associated2 polypeptide sp-c in an apolar solvent contains a valyl-3 rich alpha-helix
16c3lpzA_



6.0 42
PDB header:protein transport
Chain: A: PDB Molecule:get4 (yor164c homolog);
PDBTitle: crystal structure of c. therm. get4
17c3lfhF_



6.0 33
PDB header:transferase
Chain: F: PDB Molecule:phosphotransferase system, mannose/fructose-specific
PDBTitle: crystal structure of manxa from thermoanaerobacter tengcongensis
18c5t3uA_



5.6 36
PDB header:transport protein
Chain: A: PDB Molecule:pts system, iia component;
PDBTitle: crystal structure of the pts iia protein associated with the fucose2 utilization operon from streptococcus pneumoniae

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below