Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1442_(bisC)_1619797_1622097
DateWed Jul 31 22:05:55 BST 2019
Unique Job IDa79332dafa78170f
SequenceMQVYTSATHW ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:76.246 Y:80.583 Z:68.890
Model (left) based on template c1tmoA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:trimethylamine n-oxide reductase;
PDBTitle: trimethylamine n-oxide reductase from shewanella massilia
Confidence and coverage
Confidence:100.0% Coverage: 98%
753 residues ( 98% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1tmoA_
100.0 36
PDB header:oxidoreductase
Chain: A: PDB Molecule:trimethylamine n-oxide reductase;
PDBTitle: trimethylamine n-oxide reductase from shewanella massilia
2c1h5nC_
100.0 42
PDB header:oxidoreductase
Chain: C: PDB Molecule:dmso reductase;
PDBTitle: dmso reductase modified by the presence of dms and air
3c1eu1A_
100.0 42
PDB header:oxidoreductase
Chain: A: PDB Molecule:dimethyl sulfoxide reductase;
PDBTitle: the crystal structure of rhodobacter sphaeroides dimethylsulfoxide2 reductase reveals two distinct molybdenum coordination environments.
4c1vlfQ_
100.0 25
PDB header:oxidoreductase
Chain: Q: PDB Molecule:pyrogallol hydroxytransferase large subunit;
PDBTitle: crystal structure of pyrogallol-phloroglucinol transhydroxylase from2 pelobacter acidigallici complexed with inhibitor 1,2,4,5-3 tetrahydroxy-benzene
5c5ch7E_
100.0 22
PDB header:oxidoreductase
Chain: E: PDB Molecule:dmso reductase family type ii enzyme, molybdopterin
PDBTitle: crystal structure of the perchlorate reductase pcrab - phe164 gate2 switch intermediate - from azospira suillum ps
6c1y5iA_
100.0 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:respiratory nitrate reductase 1 alpha chain;
PDBTitle: the crystal structure of the narghi mutant nari-k86a
7c2e7zA_
100.0 21
PDB header:lyase
Chain: A: PDB Molecule:acetylene hydratase ahy;
PDBTitle: acetylene hydratase from pelobacter acetylenicus
8c1h0hA_
100.0 18
PDB header:electron transport
Chain: A: PDB Molecule:formate dehydrogenase subunit alpha;
PDBTitle: tungsten containing formate dehydrogenase from desulfovibrio gigas
9c1kqgA_
100.0 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:formate dehydrogenase, nitrate-inducible, major subunit;
PDBTitle: formate dehydrogenase n from e. coli
10c2vpyE_
100.0 22
PDB header:oxidoreductase
Chain: E: PDB Molecule:thiosulfate reductase;
PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp)
11c2ivfA_
100.0 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:ethylbenzene dehydrogenase alpha-subunit;
PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum
12c6cz7C_
100.0 19
PDB header:oxidoreductase
Chain: C: PDB Molecule:arra;
PDBTitle: the arsenate respiratory reductase (arr) complex from shewanella sp.2 ana-3
13c2v45A_
100.0 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:periplasmic nitrate reductase;
PDBTitle: a new catalytic mechanism of periplasmic nitrate reductase2 from desulfovibrio desulfuricans atcc 27774 from3 crystallographic and epr data and based on detailed4 analysis of the sixth ligand
14c2nyaF_
100.0 19
PDB header:oxidoreductase
Chain: F: PDB Molecule:periplasmic nitrate reductase;
PDBTitle: crystal structure of the periplasmic nitrate reductase2 (nap) from escherichia coli
15c1ogyA_
100.0 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:periplasmic nitrate reductase;
PDBTitle: crystal structure of the heterodimeric nitrate reductase2 from rhodobacter sphaeroides
16c2iv2X_
100.0 20
PDB header:oxidoreductase
Chain: X: PDB Molecule:formate dehydrogenase h;
PDBTitle: reinterpretation of reduced form of formate dehydrogenase h from e.2 coli
17d1tmoa2
100.0 35
Fold:Formate dehydrogenase/DMSO reductase, domains 1-3
Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3
Family:Formate dehydrogenase/DMSO reductase, domains 1-3
18c4aayE_
100.0 17
PDB header:oxidoreductase
Chain: E: PDB Molecule:aroa;
PDBTitle: crystal structure of the arsenite oxidase protein complex2 from rhizobium species strain nt-26
19d1dmra2
100.0 40
Fold:Formate dehydrogenase/DMSO reductase, domains 1-3
Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3
Family:Formate dehydrogenase/DMSO reductase, domains 1-3
20c1g8jC_
100.0 15
PDB header:oxidoreductase
Chain: C: PDB Molecule:arsenite oxidase;
PDBTitle: crystal structure analysis of arsenite oxidase from2 alcaligenes faecalis
21d1eu1a2
not modelled 100.0 41
Fold:Formate dehydrogenase/DMSO reductase, domains 1-3
Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3
Family:Formate dehydrogenase/DMSO reductase, domains 1-3
22d1vlfm2
not modelled 100.0 24
Fold:Formate dehydrogenase/DMSO reductase, domains 1-3
Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3
Family:Formate dehydrogenase/DMSO reductase, domains 1-3
23d2jioa2
not modelled 100.0 21
Fold:Formate dehydrogenase/DMSO reductase, domains 1-3
Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3
Family:Formate dehydrogenase/DMSO reductase, domains 1-3
24d1kqfa2
not modelled 100.0 16
Fold:Formate dehydrogenase/DMSO reductase, domains 1-3
Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3
Family:Formate dehydrogenase/DMSO reductase, domains 1-3
25d1y5ia2
not modelled 100.0 27
Fold:Formate dehydrogenase/DMSO reductase, domains 1-3
Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3
Family:Formate dehydrogenase/DMSO reductase, domains 1-3
26d2iv2x2
not modelled 100.0 21
Fold:Formate dehydrogenase/DMSO reductase, domains 1-3
Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3
Family:Formate dehydrogenase/DMSO reductase, domains 1-3
27d1h0ha2
not modelled 100.0 19
Fold:Formate dehydrogenase/DMSO reductase, domains 1-3
Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3
Family:Formate dehydrogenase/DMSO reductase, domains 1-3
28d1ogya2
not modelled 100.0 19
Fold:Formate dehydrogenase/DMSO reductase, domains 1-3
Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3
Family:Formate dehydrogenase/DMSO reductase, domains 1-3
29d1g8ka2
not modelled 100.0 14
Fold:Formate dehydrogenase/DMSO reductase, domains 1-3
Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3
Family:Formate dehydrogenase/DMSO reductase, domains 1-3
30c6btmB_
not modelled 100.0 14
PDB header:membrane protein
Chain: B: PDB Molecule:alternative complex iii subunit b;
PDBTitle: structure of alternative complex iii from flavobacterium johnsoniae2 (wild type)
31c6f0kB_
not modelled 100.0 14
PDB header:membrane protein
Chain: B: PDB Molecule:fe-s-cluster-containing hydrogenase;
PDBTitle: alternative complex iii
32c2fugC_
not modelled 100.0 17
PDB header:oxidoreductase
Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3;
PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus
33c6gcsA_
not modelled 100.0 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:75-kda protein (nuam);
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
34c5t5mB_
not modelled 100.0 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:tungsten formylmethanofuran dehydrogenase subunit fwdb;
PDBTitle: tungsten-containing formylmethanofuran dehydrogenase from2 methanothermobacter wolfeii, trigonal form at 2.5 a.
35c5lnk3_
not modelled 100.0 17
PDB header:oxidoreductase
Chain: 3: PDB Molecule:mitochondrial complex i, 75 kda subunit;
PDBTitle: entire ovine respiratory complex i
36d2fug32
not modelled 100.0 15
Fold:Formate dehydrogenase/DMSO reductase, domains 1-3
Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3
Family:Formate dehydrogenase/DMSO reductase, domains 1-3
37d1eu1a1
not modelled 100.0 43
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
38d1dmra1
not modelled 100.0 45
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
39d1tmoa1
not modelled 100.0 40
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
40d1vlfm1
not modelled 100.0 26
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
41d1kqfa1
not modelled 100.0 20
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
42d1h0ha1
not modelled 100.0 14
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
43d2jioa1
not modelled 100.0 24
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
44d1g8ka1
not modelled 100.0 19
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
45d1ogya1
not modelled 99.9 21
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
46d1y5ia1
not modelled 99.9 16
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
47d2iv2x1
not modelled 99.9 14
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
48c5t5iL_
not modelled 99.9 18
PDB header:oxidoreductase
Chain: L: PDB Molecule:tungsten formylmethanofuran dehydrogenase subunit fwdd;
PDBTitle: tungsten-containing formylmethanofuran dehydrogenase from2 methanothermobacter wolfeii, orthorhombic form at 1.9 a
49c2ki8A_
not modelled 99.9 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:tungsten formylmethanofuran dehydrogenase,
PDBTitle: solution nmr structure of tungsten formylmethanofuran2 dehydrogenase subunit d from archaeoglobus fulgidus,3 northeast structural genomics consortium target att7
50d2fug31
not modelled 97.2 30
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
51c2pjhB_
not modelled 96.5 15
PDB header:transport protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: strctural model of the p97 n domain- npl4 ubd complex
52c4ga5H_
not modelled 96.2 22
PDB header:transferase
Chain: H: PDB Molecule:putative thymidine phosphorylase;
PDBTitle: crystal structure of amp phosphorylase c-terminal deletion mutant in2 the apo-form
53c3knzA_
not modelled 96.1 18
PDB header:sugar binding protein
Chain: A: PDB Molecule:putative sugar binding protein;
PDBTitle: crystal structure of putative sugar binding protein (np_459565.1) from2 salmonella typhimurium lt2 at 2.50 a resolution
54c3euaD_
not modelled 96.0 12
PDB header:isomerase
Chain: D: PDB Molecule:putative fructose-aminoacid-6-phosphate deglycase;
PDBTitle: crystal structure of a putative phosphosugar isomerase (bsu32610) from2 bacillus subtilis at 1.90 a resolution
55c5e7pA_
not modelled 95.9 19
PDB header:hydrolase
Chain: A: PDB Molecule:cell division control protein cdc48;
PDBTitle: crystal structure of msmeg_0858 (uniprot a0qqs4), a aaa atpase.
56c5ifwB_
not modelled 95.7 14
PDB header:signaling protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: quantitative interaction mapping reveals an extended ubiquitin2 regulatory domain in aspl that disrupts functional p97 hexamers and3 induces cell death
57d2ez9a1
not modelled 95.6 10
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Pyruvate oxidase and decarboxylase, middle domain
58d1e32a1
not modelled 95.6 16
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Cdc48 N-terminal domain-like
59c5cupB_
not modelled 95.5 29
PDB header:transferase
Chain: B: PDB Molecule:phosphate propanoyltransferase;
PDBTitle: structure of rhodopseudomonas palustris pdul - phosphate bound form
60d1ozha1
not modelled 95.4 15
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Pyruvate oxidase and decarboxylase, middle domain
61c3k35D_
not modelled 95.3 29
PDB header:hydrolase
Chain: D: PDB Molecule:nad-dependent deacetylase sirtuin-6;
PDBTitle: crystal structure of human sirt6
62c1cz5A_
not modelled 95.2 14
PDB header:hydrolase
Chain: A: PDB Molecule:vcp-like atpase;
PDBTitle: nmr structure of vat-n: the n-terminal domain of vat (vcp-2 like atpase of thermoplasma)
63d2ihta1
not modelled 95.1 13
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Pyruvate oxidase and decarboxylase, middle domain
64c3etnD_
not modelled 95.0 15
PDB header:isomerase
Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule
PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution
65c3pkiF_
not modelled 95.0 29
PDB header:hydrolase
Chain: F: PDB Molecule:nad-dependent deacetylase sirtuin-6;
PDBTitle: human sirt6 crystal structure in complex with adp ribose
66d2djia1
not modelled 94.7 6
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Pyruvate oxidase and decarboxylase, middle domain
67c6opcF_
not modelled 94.6 26
PDB header:motor protein
Chain: F: PDB Molecule:cell division control protein 48;
PDBTitle: cdc48 hexamer in a complex with substrate and shp1(ubx domain)
68c3zg6A_
not modelled 94.6 27
PDB header:hydrolase/inhibitor
Chain: A: PDB Molecule:nad-dependent protein deacetylase sirtuin-6;
PDBTitle: the novel de-long chain fatty acid function of human sirt6
69d1cz5a1
not modelled 94.5 14
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Cdc48 N-terminal domain-like
70c3cf2B_
not modelled 94.5 15
PDB header:transport protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97/vcp in complex with adp/amp-pnp
71d1m2ka_
not modelled 94.3 19
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
72c2a3nA_
not modelled 94.2 16
PDB header:sugar binding protein
Chain: A: PDB Molecule:putative glucosamine-fructose-6-phosphate aminotransferase;
PDBTitle: crystal structure of a putative glucosamine-fructose-6-phosphate2 aminotransferase (stm4540.s) from salmonella typhimurium lt2 at 1.353 a resolution
73c5oj7A_
not modelled 94.2 3
PDB header:hydrolase
Chain: A: PDB Molecule:nad-dependent protein deacylase;
PDBTitle: sirtuin 4 orthologue from xenopus tropicalis in complex with adp-2 ribose
74d2b4ya1
not modelled 94.2 18
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
75d1x94a_
not modelled 94.1 11
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
76c1s3sA_
not modelled 94.1 14
PDB header:protein binding
Chain: A: PDB Molecule:transitional endoplasmic reticulum atpase (ter
PDBTitle: crystal structure of aaa atpase p97/vcp nd1 in complex with2 p47 c
77c3fkjA_
not modelled 94.0 13
PDB header:isomerase
Chain: A: PDB Molecule:putative phosphosugar isomerases;
PDBTitle: crystal structure of a putative phosphosugar isomerase (stm_0572) from2 salmonella typhimurium lt2 at 2.12 a resolution
78d1q6za1
not modelled 94.0 18
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Pyruvate oxidase and decarboxylase, middle domain
79d1ma3a_
not modelled 94.0 14
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
80d1ybha1
not modelled 93.8 15
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Pyruvate oxidase and decarboxylase, middle domain
81c3jwpA_
not modelled 93.7 15
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein sir2 homologue;
PDBTitle: crystal structure of plasmodium falciparum sir2a (pf13_0152) in2 complex with amp
82d1x92a_
not modelled 93.4 13
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
83c3g68A_
not modelled 93.2 14
PDB header:isomerase
Chain: A: PDB Molecule:putative phosphosugar isomerase;
PDBTitle: crystal structure of a putative phosphosugar isomerase (cd3275) from2 clostridium difficile 630 at 1.80 a resolution
84d2ji7a1
not modelled 93.1 12
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Pyruvate oxidase and decarboxylase, middle domain
85d1yc5a1
not modelled 93.0 18
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
86c3hu2C_
not modelled 92.9 14
PDB header:transport protein
Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs
87d1s5pa_
not modelled 91.5 16
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
88c3fxaA_
not modelled 91.4 15
PDB header:sugar binding protein
Chain: A: PDB Molecule:sis domain protein;
PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution
89c3hbaA_
not modelled 91.3 16
PDB header:isomerase
Chain: A: PDB Molecule:putative phosphosugar isomerase;
PDBTitle: crystal structure of a putative phosphosugar isomerase (sden_2705)2 from shewanella denitrificans os217 at 2.00 a resolution
90d1tk9a_
not modelled 91.2 14
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
91c3cvjB_
not modelled 91.1 14
PDB header:isomerase
Chain: B: PDB Molecule:putative phosphoheptose isomerase;
PDBTitle: crystal structure of a putative phosphoheptose isomerase (bh3325) from2 bacillus halodurans c-125 at 2.00 a resolution
92c2zj3A_
not modelled 91.0 14
PDB header:transferase
Chain: A: PDB Molecule:glucosamine--fructose-6-phosphate
PDBTitle: isomerase domain of human glucose:fructose-6-phosphate2 amidotransferase
93c3cf1C_
not modelled 90.4 15
PDB header:transport protein
Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97/vcp in complex with adp/adp.alfx
94c1jxaA_
not modelled 89.7 17
PDB header:transferase
Chain: A: PDB Molecule:glucosamine 6-phosphate synthase;
PDBTitle: glucosamine 6-phosphate synthase with glucose 6-phosphate
95d1ovma1
not modelled 89.2 9
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Pyruvate oxidase and decarboxylase, middle domain
96c2x3yA_
not modelled 88.9 15
PDB header:isomerase
Chain: A: PDB Molecule:phosphoheptose isomerase;
PDBTitle: crystal structure of gmha from burkholderia pseudomallei
97c1nriA_
not modelled 88.5 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein hi0754;
PDBTitle: crystal structure of putative phosphosugar isomerase hi0754 from2 haemophilus influenzae
98d1nria_
not modelled 88.5 15
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
99d1zpda1
not modelled 87.0 16
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Pyruvate oxidase and decarboxylase, middle domain
100d1m3sa_
not modelled 87.0 18
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
101d1t9ba1
not modelled 86.9 9
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Pyruvate oxidase and decarboxylase, middle domain
102d1moqa_
not modelled 86.2 18
Fold:SIS domain
Superfamily:SIS domain
Family:double-SIS domain
103c2x7jA_
not modelled 86.0 9
PDB header:transferase
Chain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene
PDBTitle: structure of the menaquinone biosynthesis protein mend from2 bacillus subtilis
104c1wlfA_
not modelled 84.4 19
PDB header:protein transport
Chain: A: PDB Molecule:peroxisome biogenesis factor 1;
PDBTitle: structure of the n-terminal domain of pex1 aaa-atpase:2 characterization of a putative adaptor-binding domain
105c2yvaB_
not modelled 84.3 15
PDB header:dna binding protein
Chain: B: PDB Molecule:dnaa initiator-associating protein diaa;
PDBTitle: crystal structure of escherichia coli diaa
106c5g4gF_
not modelled 83.5 14
PDB header:hydrolase
Chain: F: PDB Molecule:vcp-like atpase;
PDBTitle: structure of the atpgs-bound vat complex
107c4ivnB_
not modelled 82.2 12
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: the vibrio vulnificus nanr protein complexed with mannac-6p
108d1wlfa2
not modelled 81.9 19
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Cdc48 N-terminal domain-like
109d1qcsa1
not modelled 81.0 14
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Cdc48 N-terminal domain-like
110c5udfB_
not modelled 81.0 24
PDB header:protein transport
Chain: B: PDB Molecule:lipoprotein-releasing system transmembrane protein lole;
PDBTitle: structure of the n-terminal domain of lipoprotein-releasing system2 transmembrane protein lole from acinetobacter baumannii
111d1vima_
not modelled 80.7 16
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
112d1ylea1
not modelled 80.7 22
Fold:Acyl-CoA N-acyltransferases (Nat)
Superfamily:Acyl-CoA N-acyltransferases (Nat)
Family:AstA-like
113c2ev2B_
not modelled 78.2 11
PDB header:lyase
Chain: B: PDB Molecule:hypothetical protein rv1264/mt1302;
PDBTitle: structure of rv1264n, the regulatory domain of the mycobacterial2 adenylyl cylcase rv1264, at ph 8.5
114d1jeoa_
not modelled 77.8 13
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
115c4rjjB_
not modelled 77.5 11
PDB header:lyase
Chain: B: PDB Molecule:acetolactate synthase;
PDBTitle: acetolactate synthase from bacillus subtilis bound to thdp - crystal2 form ii
116c4s12C_
not modelled 77.2 14
PDB header:lyase
Chain: C: PDB Molecule:n-acetylmuramic acid 6-phosphate etherase;
PDBTitle: 1.55 angstrom crystal structure of n-acetylmuramic acid 6-phosphate2 etherase from yersinia enterocolitica.
117c2amlB_
not modelled 76.3 13
PDB header:transferase
Chain: B: PDB Molecule:sis domain protein;
PDBTitle: crystal structure of lmo0035 protein (46906266) from listeria2 monocytogenes 4b f2365 at 1.50 a resolution
118c3shoA_
not modelled 76.1 21
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, rpir family;
PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain)
119c4s1wA_
not modelled 76.0 21
PDB header:transferase
Chain: A: PDB Molecule:glutamine--fructose-6-phosphate aminotransferase
PDBTitle: structure of a putative glutamine--fructose-6-phosphate2 aminotransferase from staphylococcus aureus subsp. aureus mu50
120c3fj1A_
not modelled 75.4 15
PDB header:isomerase
Chain: A: PDB Molecule:putative phosphosugar isomerase;
PDBTitle: crystal structure of putative phosphosugar isomerase (yp_167080.1)2 from silicibacter pomeroyi dss-3 at 1.75 a resolution

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below