Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1445c_(devB)_1623720_1624463
DateFri Aug 2 13:30:02 BST 2019
Unique Job ID35a564f5bb2f51e2
SequenceVSSSIEIFPD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:47.499 Y:45.399 Z:43.073
Model (left) based on template c3icoA_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:6-phosphogluconolactonase;
PDBTitle: crystal structure of 6-phosphogluconolactonase from mycobacterium2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 99%
244 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3icoA_
100.0 100
PDB header:hydrolase
Chain: A: PDB Molecule:6-phosphogluconolactonase;
PDBTitle: crystal structure of 6-phosphogluconolactonase from mycobacterium2 tuberculosis
2c3oc6A_
100.0 66
PDB header:hydrolase
Chain: A: PDB Molecule:6-phosphogluconolactonase;
PDBTitle: crystal structure of 6-phosphogluconolactonase from mycobacterium2 smegmatis, apo form
3c2j0eA_
100.0 29
PDB header:hydrolase
Chain: A: PDB Molecule:6-phosphogluconolactonase;
PDBTitle: three dimensional structure and catalytic mechanism of 6-2 phosphogluconolactonase from trypanosoma brucei
4c3hn6D_
100.0 22
PDB header:isomerase
Chain: D: PDB Molecule:glucosamine-6-phosphate deaminase;
PDBTitle: crystal structure of glucosamine-6-phosphate deaminase from borrelia2 burgdorferi
5d1ne7a_
100.0 24
Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:NagB-like
6c1y89B_
100.0 31
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:devb protein;
PDBTitle: crystal structure of devb protein
7c3cssA_
100.0 28
PDB header:hydrolase
Chain: A: PDB Molecule:6-phosphogluconolactonase;
PDBTitle: crystal structure of 6-phosphogluconolactonase from leishmania2 guyanensis
8d1fsfa_
100.0 22
Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:NagB-like
9c6nbgD_
100.0 22
PDB header:unknown function
Chain: D: PDB Molecule:glucosamine-6-phosphate deaminase;
PDBTitle: 2.05 angstrom resolution crystal structure of hypothetical protein2 kp1_5497 from klebsiella pneumoniae.
10c1pbtA_
100.0 29
PDB header:hydrolase, oxidoreductase
Chain: A: PDB Molecule:6-phosphogluconolactonase;
PDBTitle: the crystal structure of tm1154, oxidoreductase, sol/devb2 family from thermotoga maritima
11d1vl1a_
100.0 29
Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:NagB-like
12c3lwdA_
100.0 26
PDB header:hydrolase
Chain: A: PDB Molecule:6-phosphogluconolactonase;
PDBTitle: crystal structure of putative 6-phosphogluconolactonase (yp_574786.1)2 from chromohalobacter salexigens dsm 3043 at 1.88 a resolution
13c3e15D_
100.0 21
PDB header:hydrolase
Chain: D: PDB Molecule:glucose-6-phosphate 1-dehydrogenase;
PDBTitle: 6-phosphogluconolactonase from plasmodium vivax
14c3nwpA_
100.0 27
PDB header:hydrolase
Chain: A: PDB Molecule:6-phosphogluconolactonase;
PDBTitle: crystal structure of a 6-phosphogluconolactonase (sbal_2240) from2 shewanella baltica os155 at 1.40 a resolution
15c3lhiA_
100.0 22
PDB header:hydrolase
Chain: A: PDB Molecule:putative 6-phosphogluconolactonase;
PDBTitle: crystal structure of putative 6-phosphogluconolactonase(yp_207848.1)2 from neisseria gonorrhoeae fa 1090 at 1.33 a resolution
16c2bkxB_
100.0 24
PDB header:hydrolase
Chain: B: PDB Molecule:glucosamine-6-phosphate deaminase;
PDBTitle: structure and kinetics of a monomeric glucosamine-6-2 phosphate deaminase: missing link of the nagb superfamily
17c2ri0B_
100.0 22
PDB header:hydrolase
Chain: B: PDB Molecule:glucosamine-6-phosphate deaminase;
PDBTitle: crystal structure of glucosamine 6-phosphate deaminase (nagb) from s.2 mutans
18c4oqqA_
99.8 14
PDB header:transcription
Chain: A: PDB Molecule:deoxyribonucleoside regulator;
PDBTitle: structure of the effector-binding domain of deoxyribonucleoside2 regulator deor from bacillus subtilis
19d2gnpa1
99.7 11
Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:SorC sugar-binding domain-like
20c2w48D_
99.6 14
PDB header:transcription
Chain: D: PDB Molecule:sorbitol operon regulator;
PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae
21d2o0ma1
not modelled 99.5 15
Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:SorC sugar-binding domain-like
22c2o0mA_
not modelled 99.5 15
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, sorc family;
PDBTitle: the crystal structure of the putative sorc family transcriptional2 regulator from enterococcus faecalis
23d3efba1
not modelled 99.5 14
Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:SorC sugar-binding domain-like
24c3nzeB_
not modelled 99.4 17
PDB header:transcription regulator
Chain: B: PDB Molecule:putative transcriptional regulator, sugar-binding family;
PDBTitle: the crystal structure of a domain of a possible sugar-binding2 transcriptional regulator from arthrobacter aurescens tc1.
25c4r9nA_
not modelled 99.4 15
PDB header:transcription
Chain: A: PDB Molecule:lmo0547 protein;
PDBTitle: deor family transcriptional regulator from listeria monocytogenes.
26c4go1A_
not modelled 98.7 22
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator lsrr;
PDBTitle: crystal structure of full length transcription repressor lsrr from e.2 coli.
27d2okga1
not modelled 98.5 14
Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:SorC sugar-binding domain-like
28c3kv1A_
not modelled 97.5 13
PDB header:transcription
Chain: A: PDB Molecule:transcriptional repressor;
PDBTitle: crystal structure of putative sugar-binding domain of transcriptional2 repressor from vibrio fischeri
29d2r5fa1
not modelled 97.4 16
Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:SorC sugar-binding domain-like
30c2e21A_
not modelled 91.9 14
PDB header:ligase
Chain: A: PDB Molecule:trna(ile)-lysidine synthase;
PDBTitle: crystal structure of tils in a complex with amppnp from aquifex2 aeolicus.
31d1zuna1
not modelled 86.9 8
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:PAPS reductase-like
32c1ni5A_
not modelled 81.5 14
PDB header:cell cycle
Chain: A: PDB Molecule:putative cell cycle protein mesj;
PDBTitle: structure of the mesj pp-atpase from escherichia coli
33d1wy5a1
not modelled 77.0 14
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:PP-loop ATPase
34c3vrhA_
not modelled 76.2 9
PDB header:rna binding protein
Chain: A: PDB Molecule:putative uncharacterized protein ph0300;
PDBTitle: crystal structure of ph0300
35c5udwB_
not modelled 73.4 11
PDB header:transferase
Chain: B: PDB Molecule:lactate racemization operon protein lare;
PDBTitle: lare, a sulfur transferase involved in synthesis of the cofactor for2 lactate racemase, in complex with nickel
36c3a2kB_
not modelled 72.8 15
PDB header:ligase/rna
Chain: B: PDB Molecule:trna(ile)-lysidine synthase;
PDBTitle: crystal structure of tils complexed with trna
37c2oq2B_
not modelled 66.6 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:phosphoadenosine phosphosulfate reductase;
PDBTitle: crystal structure of yeast paps reductase with pap, a product complex
38d1ni5a1
not modelled 56.5 14
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:PP-loop ATPase
39c2goyC_
not modelled 53.5 18
PDB header:oxidoreductase
Chain: C: PDB Molecule:adenosine phosphosulfate reductase;
PDBTitle: crystal structure of assimilatory adenosine 5'-2 phosphosulfate reductase with bound aps
40c1zunA_
not modelled 52.1 8
PDB header:transferase
Chain: A: PDB Molecule:sulfate adenylyltransferase subunit 2;
PDBTitle: crystal structure of a gtp-regulated atp sulfurylase2 heterodimer from pseudomonas syringae
41c2q4dB_
not modelled 48.6 22
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:lysine decarboxylase-like protein at5g11950;
PDBTitle: ensemble refinement of the crystal structure of a lysine2 decarboxylase-like protein from arabidopsis thaliana gene at5g11950
42c3uowB_
not modelled 48.2 8
PDB header:ligase
Chain: B: PDB Molecule:gmp synthetase;
PDBTitle: crystal structure of pf10_0123, a gmp synthetase from plasmodium2 falciparum
43d1wxia1
not modelled 46.5 9
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:N-type ATP pyrophosphatases
44d1pjqa3
not modelled 45.9 19
Fold:Siroheme synthase middle domains-like
Superfamily:Siroheme synthase middle domains-like
Family:Siroheme synthase middle domains-like
45c5tw7E_
not modelled 45.5 15
PDB header:ligase
Chain: E: PDB Molecule:gmp synthase [glutamine-hydrolyzing];
PDBTitle: crystal structure of a gmp synthase (glutamine-hydrolyzing) from2 neisseria gonorrhoeae
46c4xgjA_
not modelled 43.4 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a domain of unknown function (duf1537) from2 pectobacterium atrosepticum (eca3761), target efi-511609, apo3 structure, domain swapped dimer
47d1gpma1
not modelled 43.3 15
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:N-type ATP pyrophosphatases
48d1ydha_
not modelled 41.7 22
Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:MoCo carrier protein-like
49c1gpmD_
not modelled 39.3 18
PDB header:transferase (glutamine amidotransferase)
Chain: D: PDB Molecule:gmp synthetase;
PDBTitle: escherichia coli gmp synthetase complexed with amp and pyrophosphate
50c2dplA_
not modelled 38.3 16
PDB header:ligase
Chain: A: PDB Molecule:gmp synthase [glutamine-hydrolyzing] subunit b;
PDBTitle: crystal structure of the gmp synthase from pyrococcus horikoshii ot3
51c3dpiA_
not modelled 38.0 17
PDB header:ligase
Chain: A: PDB Molecule:nad+ synthetase;
PDBTitle: crystal structure of nad+ synthetase from burkholderia pseudomallei
52d3bzka5
not modelled 37.1 13
Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Tex RuvX-like domain-like
53c3u7jA_
not modelled 36.8 20
PDB header:isomerase
Chain: A: PDB Molecule:ribose-5-phosphate isomerase a;
PDBTitle: crystal structure of ribose-5-phosphate isomerase a from burkholderia2 thailandensis
54c3tqiB_
not modelled 36.7 13
PDB header:ligase
Chain: B: PDB Molecule:gmp synthase [glutamine-hydrolyzing];
PDBTitle: structure of the gmp synthase (guaa) from coxiella burnetii
55d1xnga1
not modelled 36.7 12
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:N-type ATP pyrophosphatases
56c5hujB_
not modelled 36.4 12
PDB header:transferase
Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase;
PDBTitle: crystal structure of nade from streptococcus pyogenes
57d1uj4a1
not modelled 35.9 19
Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:D-ribose-5-phosphate isomerase (RpiA), catalytic domain
58c4bwvB_
not modelled 35.2 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:phosphoadenosine-phosphosulphate reductase;
PDBTitle: structure of adenosine 5-prime-phosphosulfate reductase apr-b from2 physcomitrella patens
59c4xfdA_
not modelled 33.0 20
PDB header:ligase
Chain: A: PDB Molecule:nh(3)-dependent nad(+) synthetase;
PDBTitle: crystal structure of a nh(3)-dependent nad(+) synthetase from2 pseudomonas aeruginosa
60c4q16C_
not modelled 32.5 18
PDB header:ligase
Chain: C: PDB Molecule:nh(3)-dependent nad(+) synthetase;
PDBTitle: structure of nad+ synthetase from deinococcus radiodurans
61c5itsD_
not modelled 32.1 25
PDB header:hydrolase
Chain: D: PDB Molecule:cytokinin riboside 5'-monophosphate phosphoribohydrolase;
PDBTitle: crystal strcuture of log from corynebacterium glutamicum
62c3sftA_
not modelled 31.9 15
PDB header:hydrolase
Chain: A: PDB Molecule:chemotaxis response regulator protein-glutamate
PDBTitle: crystal structure of thermotoga maritima cheb methylesterase catalytic2 domain
63d1q15a1
not modelled 31.7 19
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:N-type ATP pyrophosphatases
64d1t35a_
not modelled 31.3 19
Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:MoCo carrier protein-like
65c5zbjA_
not modelled 29.6 17
PDB header:hydrolase
Chain: A: PDB Molecule:putative cytokinin riboside 5'-monophosphate
PDBTitle: crystal strcuture of type-i log from pseudomonas aeruginosa pao1
66c2o8vA_
not modelled 29.3 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:phosphoadenosine phosphosulfate reductase;
PDBTitle: paps reductase in a covalent complex with thioredoxin c35a
67d1xhoa_
not modelled 26.0 21
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:Chorismate mutase
68c2q4oA_
not modelled 25.3 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein at2g37210/t2n18.3;
PDBTitle: ensemble refinement of the crystal structure of a lysine2 decarboxylase-like protein from arabidopsis thaliana gene at2g37210
69d2q4oa1
not modelled 25.3 21
Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:MoCo carrier protein-like
70c1xhoB_
not modelled 24.2 21
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:chorismate mutase;
PDBTitle: chorismate mutase from clostridium thermocellum cth-682
71d1kqpa_
not modelled 24.2 13
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:N-type ATP pyrophosphatases
72c6c6kD_
not modelled 23.9 43
PDB header:rna binding protein/rna
Chain: D: PDB Molecule:interferon-induced protein with tetratricopeptide repeats
PDBTitle: structural basis for preferential recognition of cap 0 rna by a human2 ifit1-ifit3 protein complex
73c1uj6A_
not modelled 23.3 19
PDB header:isomerase
Chain: A: PDB Molecule:ribose 5-phosphate isomerase;
PDBTitle: crystal structure of thermus thermophilus ribose-5-phosphate isomerase2 complexed with arabinose-5-phosphate
74c2vzaD_
not modelled 23.1 14
PDB header:cell adhesion
Chain: D: PDB Molecule:cell filamentation protein;
PDBTitle: type iv secretion system effector protein bepa
75c4gmkB_
not modelled 22.1 11
PDB header:isomerase
Chain: B: PDB Molecule:ribose-5-phosphate isomerase a;
PDBTitle: crystal structure of ribose 5-phosphate isomerase from the probiotic2 bacterium lactobacillus salivarius ucc118
76d1ct9a1
not modelled 21.4 14
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:N-type ATP pyrophosphatases
77c1x3lA_
not modelled 21.3 19
PDB header:transferase
Chain: A: PDB Molecule:hypothetical protein ph0495;
PDBTitle: crystal structure of the ph0495 protein from pyrococccus horikoshii2 ot3
78c4x84C_
not modelled 21.1 16
PDB header:isomerase
Chain: C: PDB Molecule:ribose-5-phosphate isomerase a;
PDBTitle: crystal structure of ribose-5-phosphate isomerase a from pseudomonas2 aeruginosa
79d1jgta1
not modelled 19.9 20
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:N-type ATP pyrophosphatases
80d1yzya1
not modelled 19.7 14
Fold:YgbK-like
Superfamily:YgbK-like
Family:YgbK-like
81c3q4gA_
not modelled 19.6 13
PDB header:ligase
Chain: A: PDB Molecule:nh(3)-dependent nad(+) synthetase;
PDBTitle: structure of nad synthetase from vibrio cholerae
82d2jm6b1
not modelled 19.6 8
Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
83d2fvta1
not modelled 19.5 25
Fold:MTH938-like
Superfamily:MTH938-like
Family:MTH938-like
84c3e59A_
not modelled 19.5 16
PDB header:transferase
Chain: A: PDB Molecule:pyoverdine biosynthesis protein pvca;
PDBTitle: crystal structure of the pvca (pa2254) protein from pseudomonas2 aeruginosa
85c5zi9B_
not modelled 19.3 20
PDB header:hydrolase
Chain: B: PDB Molecule:cytokinin riboside 5'-monophosphate phosphoribohydrolase;
PDBTitle: crystal strcuture of type-ii log from streptomyces coelicolor a3
86d1dbfa_
not modelled 18.6 12
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:Chorismate mutase
87c2f8mB_
not modelled 18.6 18
PDB header:isomerase
Chain: B: PDB Molecule:ribose 5-phosphate isomerase;
PDBTitle: ribose 5-phosphate isomerase from plasmodium falciparum
88c2gaaA_
not modelled 18.2 9
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical 39.9 kda protein;
PDBTitle: crystal structure of yfh7 from saccharomyces cerevisiae: a2 putative p-loop containing kinase with a circular3 permutation.
89c3l7oB_
not modelled 17.8 17
PDB header:isomerase
Chain: B: PDB Molecule:ribose-5-phosphate isomerase a;
PDBTitle: crystal structure of ribose-5-phosphate isomerase a from streptococcus2 mutans ua159
90c3fiuD_
not modelled 17.5 9
PDB header:ligase
Chain: D: PDB Molecule:nh(3)-dependent nad(+) synthetase;
PDBTitle: structure of nmn synthetase from francisella tularensis
91c6gwjK_
not modelled 16.6 21
PDB header:rna binding protein
Chain: K: PDB Molecule:probable trna n6-adenosine threonylcarbamoyltransferase;
PDBTitle: protein complex
92c1y8qA_
not modelled 16.5 16
PDB header:ligase
Chain: A: PDB Molecule:ubiquitin-like 1 activating enzyme e1a;
PDBTitle: sumo e1 activating enzyme sae1-sae2-mg-atp complex
93d2a7ya1
not modelled 16.4 32
Fold:SH3-like barrel
Superfamily:Cell growth inhibitor/plasmid maintenance toxic component
Family:Rv2302-like
94c2a7yA_
not modelled 16.4 32
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein rv2302/mt2359;
PDBTitle: solution structure of the conserved hypothetical protein2 rv2302 from the bacterium mycobacterium tuberculosis
95c1lk5C_
not modelled 16.3 17
PDB header:isomerase
Chain: C: PDB Molecule:d-ribose-5-phosphate isomerase;
PDBTitle: structure of the d-ribose-5-phosphate isomerase from2 pyrococcus horikoshii
96c4xfrB_
not modelled 15.5 33
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a domain of unknown function (duf1537) from2 bordetella bronchiseptica (bb3215), target efi-511620, with bound3 citrate, domain swapped dimer, space group p6522
97c5ghaC_
not modelled 15.3 18
PDB header:transferase/transport protein
Chain: C: PDB Molecule:sulfur transferase ttua;
PDBTitle: sulfur transferase ttua in complex with sulfur carrier ttub
98c5wq3A_
not modelled 15.2 24
PDB header:hydrolase
Chain: A: PDB Molecule:cytokinin riboside 5'-monophosphate phosphoribohydrolase;
PDBTitle: crystal strcuture of type-ii log from corynebacterium glutamicum
99d2b8na1
not modelled 15.1 22
Fold:GckA/TtuD-like
Superfamily:GckA/TtuD-like
Family:GckA/TtuD-like

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