Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1455_(-)_1640686_1641549
DateFri Aug 2 13:30:03 BST 2019
Unique Job IDfbc070529da61ee7
SequenceMKLARPDVFH ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:48.497 Y:59.574 Z:60.656
Model (left) based on template c2dlnA_
Top template information
PDB header:ligase(peptidoglycan synthesis)
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine ligase at 2.32 angstroms resolution
Confidence and coverage
Confidence:100.0% Coverage: 93%
266 residues ( 93% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2dlnA_
100.0 16
PDB header:ligase(peptidoglycan synthesis)
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine ligase at 2.32 angstroms resolution
2c2i80B_
100.0 14
PDB header:ligase
Chain: B: PDB Molecule:d-alanine-d-alanine ligase;
PDBTitle: allosteric inhibition of staphylococcus aureus d-alanine:d-alanine2 ligase revealed by crystallographic studies
3c1ehiB_
100.0 16
PDB header:ligase
Chain: B: PDB Molecule:d-alanine:d-lactate ligase;
PDBTitle: d-alanine:d-lactate ligase (lmddl2) of vancomycin-resistant2 leuconostoc mesenteroides
4c3r23B_
100.0 11
PDB header:ligase
Chain: B: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine--d-alanine ligase from bacillus2 anthracis
5c5dmxC_
100.0 15
PDB header:ligase
Chain: C: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase from acinetobacter2 baumannii, space group p212121
6c3i12A_
100.0 15
PDB header:ligase
Chain: A: PDB Molecule:d-alanine-d-alanine ligase a;
PDBTitle: the crystal structure of the d-alanyl-alanine synthetase a from2 salmonella enterica subsp. enterica serovar typhimurium str. lt2
7c6dgiA_
100.0 11
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: the crystal structure of d-alanyl-alanine synthetase a from vibrio2 cholerae o1 biovar eltor str. n16961
8c2zdqA_
100.0 17
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine:d-alanine ligase with atp2 and d-alanine:d-alanine from thermus thermophius hb8
9c4egqD_
100.0 15
PDB header:ligase
Chain: D: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase b from burkholderia2 pseudomallei
10c2pvpB_
100.0 15
PDB header:ligase
Chain: B: PDB Molecule:d-alanine-d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase from helicobacter2 pylori
11c3tqtB_
100.0 13
PDB header:ligase
Chain: B: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: structure of the d-alanine-d-alanine ligase from coxiella burnetii
12c4fu0B_
100.0 12
PDB header:ligase
Chain: B: PDB Molecule:d-alanine--d-alanine ligase 7;
PDBTitle: crystal structure of vang d-ala:d-ser ligase from enterococcus2 faecalis
13c3e5nA_
100.0 16
PDB header:ligase
Chain: A: PDB Molecule:d-alanine-d-alanine ligase a;
PDBTitle: crystal strucutre of d-alanine-d-alanine ligase from2 xanthomonas oryzae pv. oryzae kacc10331
14c4egjD_
100.0 15
PDB header:ligase
Chain: D: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of d-alanine-d-alanine ligase from burkholderia2 xenovorans
15c3se7A_
100.0 15
PDB header:ligase
Chain: A: PDB Molecule:vana;
PDBTitle: ancient vana
16c4iwyA_
100.0 17
PDB header:ligase
Chain: A: PDB Molecule:ribosomal protein s6 modification protein;
PDBTitle: semet-substituted rimk structure
17c1i7nA_
100.0 9
PDB header:neuropeptide
Chain: A: PDB Molecule:synapsin ii;
PDBTitle: crystal structure analysis of the c domain of synapsin ii2 from rat brain
18c1e4eB_
100.0 12
PDB header:ligase
Chain: B: PDB Molecule:vancomycin/teicoplanin a-type resistance protein vana;
PDBTitle: d-alanyl-d-lacate ligase
19c2p0aA_
100.0 10
PDB header:neuropeptide
Chain: A: PDB Molecule:synapsin-3;
PDBTitle: the crystal structure of human synapsin iii (syn3) in complex with2 amppnp
20c5i47A_
100.0 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:rimk domain protein atp-grasp;
PDBTitle: crystal structure of rimk domain protein atp-grasp from sphaerobacter2 thermophilus dsm 20745
21c3lwbA_
not modelled 100.0 16
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of apo d-alanine:d-alanine ligase (ddl) from2 mycobacterium tuberculosis
22c1pk8D_
not modelled 100.0 10
PDB header:membrane protein
Chain: D: PDB Molecule:rat synapsin i;
PDBTitle: crystal structure of rat synapsin i c domain complexed to2 ca.atp
23c5k2mG_
not modelled 100.0 10
PDB header:biosynthetic protein
Chain: G: PDB Molecule:rimk-related lysine biosynthesis protein;
PDBTitle: bifunctional lysx/argx from thermococcus kodakarensis with lysw-gamma-2 aaa
24c1uc8B_
not modelled 99.9 13
PDB header:biosynthetic protein
Chain: B: PDB Molecule:lysine biosynthesis enzyme;
PDBTitle: crystal structure of a lysine biosynthesis enzyme, lysx,2 from thermus thermophilus hb8
25c3vpbC_
not modelled 99.9 16
PDB header:ligase
Chain: C: PDB Molecule:putative acetylornithine deacetylase;
PDBTitle: argx from sulfolobus tokodaii complexed with2 lysw/glu/adp/mg/zn/sulfate
26c3ln6A_
not modelled 99.9 17
PDB header:ligase
Chain: A: PDB Molecule:glutathione biosynthesis bifunctional protein gshab;
PDBTitle: crystal structure of a bifunctional glutathione synthetase from2 streptococcus agalactiae
27c1gshA_
not modelled 99.9 13
PDB header:glutathione biosynthesis ligase
Chain: A: PDB Molecule:glutathione biosynthetic ligase;
PDBTitle: structure of escherichia coli glutathione synthetase at ph 7.5
28c5ig8A_
not modelled 99.9 13
PDB header:ligase
Chain: A: PDB Molecule:atp grasp ligase;
PDBTitle: crystal structure of macrocyclase mdnb from microcystis aeruginosa mrc
29c3k3pA_
not modelled 99.9 12
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--d-alanine ligase;
PDBTitle: crystal structure of the apo form of d-alanine:d-alanine ligase (ddl)2 from streptococcus mutans
30c2qb5B_
not modelled 99.9 13
PDB header:transferase
Chain: B: PDB Molecule:inositol-tetrakisphosphate 1-kinase;
PDBTitle: crystal structure of human inositol 1,3,4-trisphosphate 5/6-kinase2 (itpk1) in complex with adp and mn2+
31c1z2pX_
not modelled 99.9 12
PDB header:transferase
Chain: X: PDB Molecule:inositol 1,3,4-trisphosphate 5/6-kinase;
PDBTitle: inositol 1,3,4-trisphosphate 5/6-kinase in complex with mg2+/amp-2 pcp/ins(1,3,4)p3
32c3ln7A_
not modelled 99.9 17
PDB header:ligase
Chain: A: PDB Molecule:glutathione biosynthesis bifunctional protein gshab;
PDBTitle: crystal structure of a bifunctional glutathione synthetase from2 pasteurella multocida
33c5ig9H_
not modelled 99.9 11
PDB header:ligase
Chain: H: PDB Molecule:atp grasp ligase;
PDBTitle: crystal structure of macrocyclase mdnc bound with precursor peptide2 mdna from microcystis aeruginosa mrc
34d1pk8a2
not modelled 99.9 10
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:Synapsin C-terminal domain
35c1kjjA_
not modelled 99.9 16
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase 2;
PDBTitle: crystal structure of glycniamide ribonucleotide transformylase in2 complex with mg-atp-gamma-s
36c3t9aA_
not modelled 99.9 10
PDB header:transferase
Chain: A: PDB Molecule:inositol pyrophosphate kinase;
PDBTitle: crystal structure of the catalytic domain of human diphosphoinositol2 pentakisphosphate kinase 2 (ppip5k2) in complex with amppnp at ph 7.0
37c1m6vE_
not modelled 99.9 14
PDB header:ligase
Chain: E: PDB Molecule:carbamoyl phosphate synthetase large chain;
PDBTitle: crystal structure of the g359f (small subunit) point mutant of2 carbamoyl phosphate synthetase
38c1vkzA_
not modelled 99.9 15
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine--glycine ligase (tm1250) from2 thermotoga maritima at 2.30 a resolution
39c4wd3B_
not modelled 99.9 12
PDB header:ligase
Chain: B: PDB Molecule:l-amino acid ligase;
PDBTitle: crystal structure of an l-amino acid ligase riza
40c2dzdB_
not modelled 99.9 12
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of the biotin carboxylase domain of pyruvate2 carboxylase
41c2vpqA_
not modelled 99.9 12
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: crystal structure of biotin carboxylase from s. aureus2 complexed with amppnp
42c2yyaB_
not modelled 99.9 14
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of gar synthetase from aquifex aeolicus
43c2xd4A_
not modelled 99.9 13
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: nucleotide-bound structures of bacillus subtilis glycinamide2 ribonucleotide synthetase
44d1i7na2
not modelled 99.9 10
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:Synapsin C-terminal domain
45c3ouzA_
not modelled 99.9 12
PDB header:ligase
Chain: A: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of biotin carboxylase-adp complex from campylobacter2 jejuni
46c3bg5C_
not modelled 99.9 10
PDB header:ligase
Chain: C: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of staphylococcus aureus pyruvate carboxylase
47c4mamB_
not modelled 99.9 13
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: the crystal structure of phosphoribosylaminoimidazole carboxylase2 atpase subunit of francisella tularensis subsp. tularensis schu s4 in3 complex with an adp analog, amp-cp
48c1ulzA_
not modelled 99.9 14
PDB header:ligase
Chain: A: PDB Molecule:pyruvate carboxylase n-terminal domain;
PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase
49c3g8cB_
not modelled 99.9 14
PDB header:ligase
Chain: B: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of biotin carboxylase in complex with biotin,2 bicarbonate, adp and mg ion
50c3lp8A_
not modelled 99.9 15
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine-glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine-glycine ligase from2 ehrlichia chaffeensis
51c4ffnA_
not modelled 99.9 13
PDB header:ligase/substrate
Chain: A: PDB Molecule:pylc;
PDBTitle: pylc in complex with d-ornithine and amppnp
52c3df7A_
not modelled 99.9 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative atp-grasp superfamily protein;
PDBTitle: crystal structure of a putative atp-grasp superfamily protein from2 archaeoglobus fulgidus
53c3etjB_
not modelled 99.9 17
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase
PDBTitle: crystal structure e. coli purk in complex with mg, adp, and2 pi
54c2hjwA_
not modelled 99.9 16
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase 2;
PDBTitle: crystal structure of the bc domain of acc2
55c2ip4A_
not modelled 99.9 15
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of glycinamide ribonucleotide synthetase from2 thermus thermophilus hb8
56c1w96B_
not modelled 99.9 15
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase;
PDBTitle: crystal structure of biotin carboxylase domain of acetyl-2 coenzyme a carboxylase from saccharomyces cerevisiae in3 complex with soraphen a
57c3vmmA_
not modelled 99.9 13
PDB header:ligase
Chain: A: PDB Molecule:alanine-anticapsin ligase bacd;
PDBTitle: crystal structure of bacd, an l-amino acid dipeptide ligase from2 bacillus subtilis
58d1iowa2
not modelled 99.9 19
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:ATP-binding domain of peptide synthetases
59c3orqA_
not modelled 99.9 12
PDB header:ligase,biosynthetic protein
Chain: A: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide synthetase;
PDBTitle: crystal structure of n5-carboxyaminoimidazole synthetase from2 staphylococcus aureus complexed with adp
60c3uvzB_
not modelled 99.8 15
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase, atpase2 subunit from burkholderia ambifaria
61c3tw6B_
not modelled 99.8 14
PDB header:ligase/activator
Chain: B: PDB Molecule:pyruvate carboxylase protein;
PDBTitle: structure of rhizobium etli pyruvate carboxylase t882a with the2 allosteric activator, acetyl coenzyme-a
62d1e4ea2
not modelled 99.8 12
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:ATP-binding domain of peptide synthetases
63c3q2oB_
not modelled 99.8 15
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: crystal structure of purk: n5-carboxyaminoimidazole ribonucleotide2 synthetase
64c3votB_
not modelled 99.8 10
PDB header:ligase
Chain: B: PDB Molecule:l-amino acid ligase, bl00235;
PDBTitle: crystal structure of l-amino acid ligase from bacillus licheniformis
65d1ehia2
not modelled 99.8 18
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:ATP-binding domain of peptide synthetases
66c3k5iB_
not modelled 99.8 12
PDB header:lyase
Chain: B: PDB Molecule:phosphoribosyl-aminoimidazole carboxylase;
PDBTitle: crystal structure of n5-carboxyaminoimidazole synthase from2 aspergillus clavatus in complex with adp and 5-aminoimadazole3 ribonucleotide
67c3gidB_
not modelled 99.8 14
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coa carboxylase 2;
PDBTitle: the biotin carboxylase (bc) domain of human acetyl-coa carboxylase 22 (acc2) in complex with soraphen a
68c4dimA_
not modelled 99.8 11
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylglycinamide synthetase;
PDBTitle: crystal structure of phosphoribosylglycinamide synthetase from2 anaerococcus prevotii
69c5mlkA_
not modelled 99.8 13
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: biotin dependent carboxylase acca3 dimer from mycobacterium2 tuberculosis (rv3285)
70c3u9sA_
not modelled 99.8 15
PDB header:ligase
Chain: A: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit;
PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex
71c3ax6C_
not modelled 99.8 13
PDB header:ligase
Chain: C: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: crystal structure of n5-carboxyaminoimidazole ribonucleotide2 synthetase from thermotoga maritima
72c3aw8A_
not modelled 99.8 16
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit;
PDBTitle: crystal structure of n5-carboxyaminoimidazole ribonucleotide2 synthetase from thermus thermophilus hb8
73d1uc8a2
not modelled 99.8 13
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:Lysine biosynthesis enzyme LysX ATP-binding domain
74c2gpwC_
not modelled 99.8 14
PDB header:ligase
Chain: C: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of the biotin carboxylase subunit, f363a2 mutant, of acetyl-coa carboxylase from escherichia coli.
75c2ys6A_
not modelled 99.8 14
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylglycinamide synthetase;
PDBTitle: crystal structure of gar synthetase from geobacillus kaustophilus
76c3u9sE_
not modelled 99.8 15
PDB header:ligase
Chain: E: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit;
PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex
77c2qk4A_
not modelled 99.8 17
PDB header:ligase
Chain: A: PDB Molecule:trifunctional purine biosynthetic protein adenosine-3;
PDBTitle: human glycinamide ribonucleotide synthetase
78c4qslC_
not modelled 99.8 12
PDB header:ligase
Chain: C: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of listeria monocytogenes pyruvate carboxylase
79c2pn1A_
not modelled 99.8 16
PDB header:ligase
Chain: A: PDB Molecule:carbamoylphosphate synthase large subunit;
PDBTitle: crystal structure of carbamoylphosphate synthase large subunit (split2 gene in mj) (zp_00538348.1) from exiguobacterium sp. 255-15 at 2.00 a3 resolution
80d1vkza3
not modelled 99.7 14
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
81c3n6rK_
not modelled 99.7 13
PDB header:ligase
Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit;
PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc)
82c3hblA_
not modelled 99.7 11
PDB header:ligase
Chain: A: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of s. aureus pyruvate carboxylase t908a mutant
83c2dwcB_
not modelled 99.7 13
PDB header:transferase
Chain: B: PDB Molecule:433aa long hypothetical phosphoribosylglycinamide formyl
PDBTitle: crystal structure of probable phosphoribosylglycinamide formyl2 transferase from pyrococcus horikoshii ot3 complexed with adp
84c5vz0D_
not modelled 99.7 12
PDB header:ligase
Chain: D: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of lactococcus lactis pyruvate carboxylase g746a2 mutant in complex with cyclic-di-amp
85d1a9xa5
not modelled 99.7 10
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
86d1w96a3
not modelled 99.7 19
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
87c5h80A_
not modelled 99.7 14
PDB header:ligase
Chain: A: PDB Molecule:carboxylase;
PDBTitle: biotin carboxylase domain of single-chain bacterial carboxylase
88c5vevB_
not modelled 99.7 10
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine-glycine ligase from neisseria2 gonorrhoeae
89c3wvqA_
not modelled 99.7 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:pgm1;
PDBTitle: structure of atp grasp protein
90d3etja3
not modelled 99.7 14
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
91c1gsoA_
not modelled 99.7 12
PDB header:ligase
Chain: A: PDB Molecule:protein (glycinamide ribonucleotide synthetase);
PDBTitle: glycinamide ribonucleotide synthetase (gar-syn) from e.2 coli.
92d2j9ga3
not modelled 99.7 17
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
93d2r85a2
not modelled 99.7 15
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:PurP ATP-binding domain-like
94c4qslE_
not modelled 99.6 12
PDB header:ligase
Chain: E: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of listeria monocytogenes pyruvate carboxylase
95d1gsaa2
not modelled 99.6 14
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:ATP-binding domain of peptide synthetases
96d2r7ka2
not modelled 99.6 12
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:PurP ATP-binding domain-like
97c6g2dC_
not modelled 99.6 16
PDB header:ligase
Chain: C: PDB Molecule:acetyl-coa carboxylase 1;
PDBTitle: citrate-induced acetyl-coa carboxylase (acc-cit) filament at 5.4 a2 resolution
98d1ulza3
not modelled 99.6 15
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
99c5cskB_
not modelled 99.6 18
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: crystal structure of yeast acetyl-coa carboxylase, unbiotinylated
100c2z04A_
not modelled 99.6 14
PDB header:lyase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase
PDBTitle: crystal structure of phosphoribosylaminoimidazole2 carboxylase atpase subunit from aquifex aeolicus
101d1kjqa3
not modelled 99.6 15
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
102d1gsoa3
not modelled 99.6 12
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
103c2r85B_
not modelled 99.6 12
PDB header:unknown function
Chain: B: PDB Molecule:purp protein pf1517;
PDBTitle: crystal structure of purp from pyrococcus furiosus complexed with amp
104d1a9xa6
not modelled 99.5 7
Fold:ATP-grasp
Superfamily:Glutathione synthetase ATP-binding domain-like
Family:BC ATP-binding domain-like
105c5cslA_
not modelled 99.2 16
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: crystal structure of the 500 kd yeast acetyl-coa carboxylase2 holoenzyme dimer
106c5douC_
not modelled 99.2 14
PDB header:ligase
Chain: C: PDB Molecule:carbamoyl-phosphate synthase [ammonia], mitochondrial;
PDBTitle: crystal structure of human carbamoyl phosphate synthetase i (cps1),2 ligand-bound form
107c5dotA_
not modelled 99.0 14
PDB header:ligase
Chain: A: PDB Molecule:carbamoyl-phosphate synthase [ammonia], mitochondrial;
PDBTitle: crystal structure of human carbamoyl phosphate synthetase i (cps1),2 apo form
108c3jzfA_
not modelled 99.0 12
PDB header:ligase
Chain: A: PDB Molecule:biotin carboxylase;
PDBTitle: crystal structure of biotin carboxylase from e. coli in2 complex with benzimidazoles series
109c2cqyA_
not modelled 98.9 18
PDB header:ligase
Chain: A: PDB Molecule:propionyl-coa carboxylase alpha chain,
PDBTitle: solution structure of b domain from human propionyl-coa2 carboxylase alpha subunit
110c5mlkB_
not modelled 98.9 17
PDB header:ligase
Chain: B: PDB Molecule:acetyl-coa carboxylase;
PDBTitle: biotin dependent carboxylase acca3 dimer from mycobacterium2 tuberculosis (rv3285)
111c3u9sI_
not modelled 98.9 17
PDB header:ligase
Chain: I: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit;
PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex
112c4yakD_
not modelled 98.8 13
PDB header:ligase
Chain: D: PDB Molecule:beta subunit of acyl-coa synthetase (ndp forming);
PDBTitle: ca. korarchaeum cryptofilum dinucleotide forming acetyl-coenzyme a2 synthetase 1 in complex with coenzyme a, acetyl-coenzyme a and with3 phosphorylated phosphohistidine segment (site i orientation)
113c5ks8B_
not modelled 98.7 13
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase subunit alpha;
PDBTitle: crystal structure of two-subunit pyruvate carboxylase from2 methylobacillus flagellatus
114d1iowa1
not modelled 98.3 11
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:D-Alanine ligase N-terminal domain
115c4hnvB_
not modelled 98.2 12
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of r54e mutant of s. aureus pyruvate carboxylase
116c3bg5B_
not modelled 98.1 13
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of staphylococcus aureus pyruvate carboxylase
117c4rcnA_
not modelled 98.1 21
PDB header:ligase
Chain: A: PDB Molecule:long-chain acyl-coa carboxylase;
PDBTitle: structure and function of a single-chain, multi-domain long-chain2 acyl-coa carboxylase
118c5i8iD_
not modelled 98.1 15
PDB header:hydrolase
Chain: D: PDB Molecule:urea amidolyase;
PDBTitle: crystal structure of the k. lactis urea amidolyase
119c4qskB_
not modelled 98.0 12
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of l. monocytogenes pyruvate carboxylase in complex2 with cyclic-di-amp
120c6no2B_
not modelled 98.0 24
PDB header:ligase
Chain: B: PDB Molecule:succinate--coa ligase [adp-forming] subunit beta;
PDBTitle: adp bound to k114bd mutant atp-grasp fold of blastocystis hominis2 succinyl-coa synthetase

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite