Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1460_(-)_1646192_1646998
DateFri Aug 2 13:30:04 BST 2019
Unique Job ID1eb13cc797f9f2bd
SequenceVTSTTLPHRA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:53.434 Y:52.190 Z:43.286
Model (left) based on template d1ulya_
Top template information
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Hypothetical protein PH1932
Confidence and coverage
Confidence: 99.5% Coverage: 42%
112 residues ( 42% of your sequence) have been modelled with 99.5% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
175 residues ( 65%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1ulya_
99.5 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Hypothetical protein PH1932
2c3bj6B_
99.2 20
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcription regulator sp03579
3d1s3ja_
99.2 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
4d1ub9a_
99.2 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
5d2p4wa1
99.2 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PF1790-like
6c6cmvA_
99.2 19
PDB header:gene regulation
Chain: A: PDB Molecule:transcriptional regulator lrs14-like protein;
PDBTitle: crystal structure of archaeal biofilm regulator (abfr2) from2 sulfolobus acidocaldarius
7d1lnwa_
99.1 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
8c5eriA_
99.1 12
PDB header:transcription
Chain: A: PDB Molecule:marr family transcriptional regulator;
PDBTitle: marr protein from peptoclostridium difficile da00132
9c2nyxB_
99.1 16
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404;
PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis
10c6jbxB_
99.1 16
PDB header:transcription/dna
Chain: B: PDB Molecule:fatty acid biosynthesis transcriptional regulator;
PDBTitle: crystal structure of streptococcus pneumoniae fabt in complex with dna
11d2a61a1
99.1 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
12d2etha1
99.1 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
13c4fhtA_
99.1 15
PDB header:transcription
Chain: A: PDB Molecule:pcav transcriptional regulator;
PDBTitle: crystal structure of the pcav transcriptional regulator from2 streptomyces coelicolor in complex with its natural ligand
14c3bpxB_
99.1 14
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of marr
15c4xrfA_
99.1 14
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of mepr like protein complexed with pseudoligands
16c3zmdD_
99.1 11
PDB header:transcription
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of absc, a marr family transcriptional2 regulator from streptomyces coelicolor
17c3g3zA_
99.1 18
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: the structure of nmb1585, a marr family regulator from neisseria2 meningitidis
18d2fbha1
99.1 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
19c3k0lA_
99.1 14
PDB header:transcription regulator
Chain: A: PDB Molecule:repressor protein;
PDBTitle: crystal structure of putative marr family transcriptional2 regulator from acinetobacter sp. adp
20c3e6mD_
99.1 18
PDB header:transcription regulator
Chain: D: PDB Molecule:marr family transcriptional regulator;
PDBTitle: the crystal structure of a marr family transcriptional2 regulator from silicibacter pomeroyi dss.
21d1jgsa_
not modelled 99.1 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
22d1lj9a_
not modelled 99.1 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
23c3nrvC_
not modelled 99.1 27
PDB header:transcription regulator
Chain: C: PDB Molecule:putative transcriptional regulator (marr/emrr family);
PDBTitle: crystal structure of marr/emrr family transcriptional regulator from2 acinetobacter sp. adp1
24c2nnnB_
not modelled 99.1 21
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulator;
PDBTitle: crystal structure of probable transcriptional regulator from2 pseudomonas aeruginosa
25d2fbia1
not modelled 99.1 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
26c3zplE_
not modelled 99.1 13
PDB header:transcription/dna
Chain: E: PDB Molecule:putative marr-family transcriptional repressor;
PDBTitle: crystal structure of sco3205, a marr family transcriptional regulator2 from streptomyces coelicolor, in complex with dna
27c4mnuA_
not modelled 99.1 11
PDB header:transcription regulator
Chain: A: PDB Molecule:slya-like transcription regulator;
PDBTitle: crystal structure of uncharacterized slya-like transcription regulator2 from listeria monocytogenes
28d3broa1
not modelled 99.1 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
29c2gxgA_
not modelled 99.0 12
PDB header:transcription
Chain: A: PDB Molecule:146aa long hypothetical transcriptional regulator;
PDBTitle: crystal structure of emrr homolog from hyperthermophilic archaea2 sulfolobus tokodaii strain7
30c3bjaA_
not modelled 99.0 12
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, marr family, putative;
PDBTitle: crystal structure of putative marr-like transcription regulator2 (np_978771.1) from bacillus cereus atcc 10987 at 2.38 a resolution
31c5jbrA_
not modelled 99.0 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bcav_2135;
PDBTitle: crystal structure of uncharacterized protein bcav_2135 from2 beutenbergia cavernae
32c3nqoB_
not modelled 99.0 14
PDB header:transcription
Chain: B: PDB Molecule:marr-family transcriptional regulator;
PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution
33d2bv6a1
not modelled 99.0 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
34c5jlsA_
not modelled 99.0 17
PDB header:transcription
Chain: A: PDB Molecule:adhesin competence repressor;
PDBTitle: crystal structure of adhesin competence repressor (adcr) from2 streptococcus pyogenes (c-terminally his tagged)
35c4em1A_
not modelled 99.0 16
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator sar2349;
PDBTitle: staphylococcus aureus marr native
36d1z91a1
not modelled 99.0 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
37d2hr3a1
not modelled 99.0 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
38c4nb5D_
not modelled 98.9 20
PDB header:dna binding protein
Chain: D: PDB Molecule:dna binding protein;
PDBTitle: crystal structure of a transcriptional regulator
39c3f6vA_
not modelled 98.9 32
PDB header:transcription regulator
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: crystal structure of possible transcriptional regulator for arsenical2 resistance
40c5zc2B_
not modelled 98.9 12
PDB header:flavoprotein
Chain: B: PDB Molecule:p-hydroxyphenylacetate 3-hydroxylase, reductase component;
PDBTitle: acinetobacter baumannii p-hydroxyphenylacetate 3-hydroxylase (hpah),2 reductase component (c1)
41c2fxaB_
not modelled 98.9 12
PDB header:transcription
Chain: B: PDB Molecule:protease production regulatory protein hpr;
PDBTitle: structure of the protease production regulatory protein hpr from2 bacillus subtilis.
42c2rdpA_
not modelled 98.9 16
PDB header:transcription
Chain: A: PDB Molecule:putative transcriptional regulator marr;
PDBTitle: the structure of a marr family protein from bacillus2 stearothermophilus
43c3f3xA_
not modelled 98.9 15
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family, putative;
PDBTitle: crystal structure of the transcriptional regulator bldr from2 sulfolobus solfataricus
44c3cjnA_
not modelled 98.9 18
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of transcriptional regulator, marr family, from2 silicibacter pomeroyi
45d1z05a1
not modelled 98.9 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ROK associated domain
46c3fm5D_
not modelled 98.8 15
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator;
PDBTitle: x-ray crystal structure of transcriptional regulator (marr family)2 from rhodococcus sp. rha1
47c5e1xA_
not modelled 98.8 13
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of the organohalide sensing rdhr-cbdba16252 transcriptional regulator in the 3,4-dichlorophenol bound form
48c4yifE_
not modelled 98.8 11
PDB header:dna binding protein
Chain: E: PDB Molecule:marr family protein rv0880;
PDBTitle: crystal structure of rv0880
49c4g6qA_
not modelled 98.8 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein kfla_6221 from2 kribbella flavida dsm 17836
50c2fa5B_
not modelled 98.8 20
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator marr/emrr family;
PDBTitle: the crystal structure of an unliganded multiple antibiotic-2 resistance repressor (marr) from xanthomonas campestris
51c6c28C_
not modelled 98.8 20
PDB header:dna binding protein
Chain: C: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: transcriptional repressor, cour, bound to p-coumaroyl-coa
52c5aiqD_
not modelled 98.8 15
PDB header:transcription
Chain: D: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of ligand-free nadr
53c2qwwB_
not modelled 98.8 14
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution
54d1ku9a_
not modelled 98.8 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:DNA-binding protein Mj223
55c3r0aB_
not modelled 98.8 15
PDB header:transcription regulator
Chain: B: PDB Molecule:putative transcriptional regulator;
PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196)
56c3bddD_
not modelled 98.8 21
PDB header:transcription
Chain: D: PDB Molecule:regulatory protein marr;
PDBTitle: crystal structure of a putative multiple antibiotic-resistance2 repressor (ssu05_1136) from streptococcus suis 89/1591 at 2.20 a3 resolution
57c3oopA_
not modelled 98.8 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lin2960 protein;
PDBTitle: the structure of a protein with unknown function from listeria innocua2 clip11262
58c2oqgA_
not modelled 98.8 30
PDB header:transcription
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: arsr-like transcriptional regulator from rhodococcus sp. rha1
59c4ijaA_
not modelled 98.7 18
PDB header:protein binding
Chain: A: PDB Molecule:xylr protein;
PDBTitle: structure of s. aureus methicillin resistance factor mecr2
60d1sfxa_
not modelled 98.7 26
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
61c5hsmA_
not modelled 98.7 18
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator rv2887;
PDBTitle: crystal structure of mycobacterium tuberculosis marr family protein2 rv2887
62c4q77B_
not modelled 98.7 12
PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator rot;
PDBTitle: crystal structure of rot, a global regulator of virulence genes in2 staphylococcus aureus
63c1z05A_
not modelled 98.7 20
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, rok family;
PDBTitle: crystal structure of the rok family transcriptional regulator, homolog2 of e.coli mlc protein.
64c5yhxH_
not modelled 98.7 18
PDB header:metal binding protein
Chain: H: PDB Molecule:zinc transport transcriptional regulator;
PDBTitle: structure of lactococcus lactis zitr, wild type
65d1p4xa2
not modelled 98.7 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
66c2pexA_
not modelled 98.6 18
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator ohrr;
PDBTitle: structure of reduced c22s ohrr from xanthamonas campestris
67c1r22B_
not modelled 98.6 27
PDB header:transcription repressor
Chain: B: PDB Molecule:transcriptional repressor smtb;
PDBTitle: crystal structure of the cyanobacterial metallothionein2 repressor smtb (c14s/c61s/c121s mutant) in the zn2alpha5-3 form
68d1p4xa1
not modelled 98.6 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
69c3cdhB_
not modelled 98.6 15
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of the marr family transcriptional regulator spo14532 from silicibacter pomeroyi dss-3
70c3s2wB_
not modelled 98.6 17
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: the crystal structure of a marr transcriptional regulator from2 methanosarcina mazei go1
71c3kp3B_
not modelled 98.6 12
PDB header:transcription regulator/antibiotic
Chain: B: PDB Molecule:transcriptional regulator tcar;
PDBTitle: staphylococcus epidermidis in complex with ampicillin
72d3ctaa1
not modelled 98.6 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
73c6j0eB_
not modelled 98.6 22
PDB header:transcription
Chain: B: PDB Molecule:arsenic responsive repressor arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
74c3f6oB_
not modelled 98.6 22
PDB header:transcription regulator
Chain: B: PDB Molecule:probable transcriptional regulator, arsr family
PDBTitle: crystal structure of arsr family transcriptional regulator,2 rha00566
75d1r1ua_
not modelled 98.6 26
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
76d2frha1
not modelled 98.6 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
77c2hoeA_
not modelled 98.6 19
PDB header:transferase
Chain: A: PDB Molecule:n-acetylglucosamine kinase;
PDBTitle: crystal structure of n-acetylglucosamine kinase (tm1224) from2 thermotoga maritima at 2.46 a resolution
78c4omzG_
not modelled 98.6 23
PDB header:transcription
Chain: G: PDB Molecule:nolr;
PDBTitle: crystal structure of nolr from sinorhizobium fredii
79c2kkoB_
not modelled 98.6 27
PDB header:dna binding protein
Chain: B: PDB Molecule:possible transcriptional regulatory protein
PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e.
80d2d1ha1
not modelled 98.6 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
81c3cuoB_
not modelled 98.6 24
PDB header:transcription regulator
Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav;
PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli
82d1r1ta_
not modelled 98.6 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
83c2lkpB_
not modelled 98.5 18
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, arsr family;
PDBTitle: solution structure of apo-nmtr
84d1hsja1
not modelled 98.5 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
85c4b8xB_
not modelled 98.5 22
PDB header:transcription
Chain: B: PDB Molecule:possible marr-transcriptional regulator;
PDBTitle: near atomic resolution crystal structure of sco5413, a marr family2 transcriptional regulator from streptomyces coelicolor
86c4hblA_
not modelled 98.5 16
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of abfr of staphylococcus epidermidis
87c3deuB_
not modelled 98.5 14
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator slya;
PDBTitle: crystal structure of transcription regulatory protein slya from2 salmonella typhimurium in complex with salicylate ligands
88c3boqB_
not modelled 98.5 14
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcriptional regulator from2 silicibacter pomeroyi
89c6j05B_
not modelled 98.5 34
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
90d2fxaa1
not modelled 98.5 12
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
91d3deua1
not modelled 98.5 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
92c4fx0A_
not modelled 98.5 20
PDB header:transcription regulator
Chain: A: PDB Molecule:probable transcriptional repressor protein;
PDBTitle: crystal structure of m. tuberculosis transcriptional regulator mosr
93d1u2wa1
not modelled 98.5 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
94c5dukA_
not modelled 98.5 21
PDB header:transcription
Chain: A: PDB Molecule:putative dna binding protein;
PDBTitle: n-terminal structure of putative dna binding transcription factor from2 thermoplasmatales archaeon scgc ab-539-n05
95c2jscB_
not modelled 98.5 36
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator rv1994c/mt2050;
PDBTitle: nmr structure of the cadmium metal-sensor cmtr from mycobacterium2 tuberculosis
96c2zkzC_
not modelled 98.5 22
PDB header:transcription
Chain: C: PDB Molecule:transcriptional repressor pagr;
PDBTitle: crystal structure of the transcriptional repressor pagr of bacillus2 anthracis
97c4esbA_
not modelled 98.5 16
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, padr family;
PDBTitle: crystal structure of padr-like transcriptional regulator (bc4206) from2 bacillus cereus strain atcc 14579
98c5zhcA_
not modelled 98.4 24
PDB header:dna binding protein
Chain: A: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of the padr-family transcriptional regulator rv34882 of mycobacterium tuberculosis h37rv
99c5dymA_
not modelled 98.4 18
PDB header:dna binding protein
Chain: A: PDB Molecule:padr-family transcriptional regulator;
PDBTitle: crystal structure of a padr family transcription regulator from2 hypervirulent clostridium difficile r20291 - cdpadr_0991 to 1.893 angstrom resolution
100c3f8fA_
not modelled 98.4 19
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, padr-like family;
PDBTitle: crystal structure of multidrug binding transcriptional regulator lmrr2 complexed with daunomycin
101c3jthA_
not modelled 98.4 21
PDB header:transcription
Chain: A: PDB Molecule:transcription activator hlyu;
PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6
102c3pqkD_
not modelled 98.4 31
PDB header:transcription
Chain: D: PDB Molecule:biofilm growth-associated repressor;
PDBTitle: crystal structure of the transcriptional repressor bigr from xylella2 fastidiosa
103c2it0A_
not modelled 98.4 21
PDB header:transcription/dna
Chain: A: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii
104c3ctaA_
not modelled 98.4 22
PDB header:transferase
Chain: A: PDB Molecule:riboflavin kinase;
PDBTitle: crystal structure of riboflavin kinase from thermoplasma acidophilum
105c3hrmA_
not modelled 98.4 13
PDB header:transcription regulator
Chain: A: PDB Molecule:hth-type transcriptional regulator sarz;
PDBTitle: crystal structure of staphylococcus aureus protein sarz in sulfenic2 acid form
106c1p4xA_
not modelled 98.4 11
PDB header:transcription
Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue;
PDBTitle: crystal structure of sars protein from staphylococcus aureus
107c2qufB_
not modelled 98.3 20
PDB header:transcription
Chain: B: PDB Molecule:transcription factor pf0095;
PDBTitle: crystal structure of transcription factor axxa-pf0095 from pyrococcus2 furiosus
108c3ecoB_
not modelled 98.3 12
PDB header:transcription
Chain: B: PDB Molecule:mepr;
PDBTitle: crystal structure of mepr, a transcription regulator of the2 staphylococcus aureus multidrug efflux pump mepa
109c3l7wA_
not modelled 98.3 22
PDB header:transcription
Chain: A: PDB Molecule:putative uncharacterized protein smu.1704;
PDBTitle: the crystal structure of smu.1704 from streptococcus mutans ua159
110c3u1dA_
not modelled 98.3 27
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the structure of a protein with a gntr superfamily winged-helix-turn-2 helix domain from halomicrobium mukohataei.
111c2wteB_
not modelled 98.3 12
PDB header:antiviral protein
Chain: B: PDB Molecule:csa3;
PDBTitle: the structure of the crispr-associated protein, csa3, from2 sulfolobus solfataricus at 1.8 angstrom resolution.
112c4o6jA_
not modelled 98.3 23
PDB header:metal binding protein
Chain: A: PDB Molecule:iron-dependent transcription repressor related protein;
PDBTitle: crystal sturucture of t. acidophilum ider
113c3hhhA_
not modelled 98.3 21
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, padr family;
PDBTitle: crystal structure of transcriptional regulator, a member of padr2 family, from enterococcus faecalis v583
114c2x4hA_
not modelled 98.3 10
PDB header:transcription
Chain: A: PDB Molecule:hypothetical protein sso2273;
PDBTitle: crystal structure of the hypothetical protein sso2273 from2 sulfolobus solfataricus
115d1okra_
not modelled 98.3 10
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Penicillinase repressor
116c3tgnA_
not modelled 98.2 19
PDB header:transcription
Chain: A: PDB Molecule:adc operon repressor adcr;
PDBTitle: crystal structure of the zinc-dependent marr family transcriptional2 regulator adcr in the zn(ii)-bound state
117c1f5tA_
not modelled 98.2 23
PDB header:transcription/dna
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: diphtheria tox repressor (c102d mutant) complexed with2 nickel and dtxr consensus binding sequence
118c5h20A_
not modelled 98.2 25
PDB header:transcription regulator
Chain: A: PDB Molecule:putative padr-family transcriptional regulatory protein;
PDBTitle: x-ray structure of padr-like transcription factor from bacteroid2 fragilis
119d2fbka1
not modelled 98.2 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
120c2h09A_
not modelled 98.2 26
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator mntr;
PDBTitle: crystal structure of diphtheria toxin repressor like protein2 from e. coli

Binding site prediction 

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If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite