Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1468c_(PE_PGRS29)_1655615_1656727
DateFri Aug 2 13:30:04 BST 2019
Unique Job ID0a71b1523089ffa4
SequenceMSFVVANTEF ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:30.809 Y:40.162 Z:1287.571
Model (left) based on template c1ygvA_
Top template information
PDB header:structural protein/contractile protein
Chain: A: PDB Molecule:collagen i alpha 1;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule: rigid refinment
Confidence and coverage
Confidence: 99.7% Coverage: 98%
363 residues ( 98% of your sequence) have been modelled with 99.7% confidence by the single highest scoring template.
Warning: 73% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1ygvA_
99.7 26
PDB header:structural protein/contractile protein
Chain: A: PDB Molecule:collagen i alpha 1;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule: rigid refinment
2c3hqvB_
99.5 22
PDB header:structural protein, contractile protein
Chain: B: PDB Molecule:collagen alpha-2(i) chain;
PDBTitle: low resolution, molecular envelope structure of type i2 collagen in situ determined by fiber diffraction. single3 type i collagen molecule, rigid body refinement
3c2g38A_
99.4 30
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
4d2g38a1
99.4 30
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PE
5c5xfsA_
99.4 49
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
6c1y0fB_
99.2 22
PDB header:structural protein/contractile protein
Chain: B: PDB Molecule:collagen i alpha 2;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule
7c3bogB_
97.5 38
PDB header:antifreeze protein
Chain: B: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein quasi-racemate
8c3bogA_
97.5 38
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein quasi-racemate
9c2pneA_
97.3 36
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: crystal structure of the snow flea antifreeze protein
10c3boiB_
97.3 36
PDB header:antifreeze protein
Chain: B: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein racemate
11c3boiA_
97.3 36
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein racemate
12c5ctdB_
95.9 34
PDB header:structural protein
Chain: B: PDB Molecule:collagen alpha-2(i) chain,collagen alpha-2(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen
13c5ctiC_
95.7 34
PDB header:structural protein
Chain: C: PDB Molecule:collagen alpha-1(i) chain,collagen alpha-3(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen (native form)
14c5ctdA_
95.6 37
PDB header:structural protein
Chain: A: PDB Molecule:collagen alpha-1(i) chain,collagen alpha-1(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen
15c2ml2A_
95.3 9
PDB header:isomerase
Chain: A: PDB Molecule:poly(beta-d-mannuronate) c5 epimerase 6;
PDBTitle: solution structure of alge6r2 subunit from the azotobacter vinelandii2 mannuronan c5-epimerase
16c2zj6A_
94.7 14
PDB header:hydrolase
Chain: A: PDB Molecule:lipase;
PDBTitle: crystal structure of d337a mutant of pseudomonas sp. mis38 lipase
17c2ml3A_
94.5 13
PDB header:isomerase
Chain: A: PDB Molecule:poly(beta-d-mannuronate) c5 epimerase 6;
PDBTitle: solution structure of alge6r3 subunit from the azotobacter vinelandii2 mannuronan c5-epimerase
18c2qubG_
94.1 12
PDB header:hydrolase
Chain: G: PDB Molecule:extracellular lipase;
PDBTitle: crystal structure of extracellular lipase lipa from serratia2 marcescens
19c1k7qA_
93.8 6
PDB header:hydrolase
Chain: A: PDB Molecule:secreted protease c;
PDBTitle: prtc from erwinia chrysanthemi: e189a mutant
20c1satA_
92.9 11
PDB header:hydrolase (serine protease)
Chain: A: PDB Molecule:serratia protease;
PDBTitle: crystal structure of the 50 kda metallo protease from s.2 marcescens
21c1nayC_
not modelled 92.6 27
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: gpp-foldon:x-ray structure
22c1jiwP_
not modelled 92.4 17
PDB header:hydrolase/hyrolase inhibitor
Chain: P: PDB Molecule:alkaline metalloproteinase;
PDBTitle: crystal structure of the apr-aprin complex
23d1k7ia1
not modelled 91.1 10
Fold:Single-stranded right-handed beta-helix
Superfamily:beta-Roll
Family:Serralysin-like metalloprotease, C-terminal domain
24d1kapp1
not modelled 90.6 17
Fold:Single-stranded right-handed beta-helix
Superfamily:beta-Roll
Family:Serralysin-like metalloprotease, C-terminal domain
25c2agmA_
not modelled 90.5 16
PDB header:isomerase
Chain: A: PDB Molecule:poly(beta-d-mannuronate) c5 epimerase 4;
PDBTitle: solution structure of the r-module from alge4
26c1om8A_
not modelled 90.1 17
PDB header:hydrolase
Chain: A: PDB Molecule:serralysin;
PDBTitle: crystal structure of a cold adapted alkaline protease from pseudomonas2 tac ii 18, co-crystallyzed with 10 mm edta
27c2klwA_
not modelled 78.4 30
PDB header:de novo protein
Chain: A: PDB Molecule:(pkg)10;
PDBTitle: solution structure of an abc collagen heterotrimer reveals a2 single-register helix stabilized by electrostatic3 interactions
28c3p4gD_
not modelled 69.3 16
PDB header:antifreeze protein
Chain: D: PDB Molecule:antifreeze protein;
PDBTitle: x-ray crystal structure of a hyperactive, ca2+-dependent, beta-helical2 antifreeze protein from an antarctic bacterium
29c5cxlA_
not modelled 68.9 13
PDB header:toxin
Chain: A: PDB Molecule:bifunctional hemolysin/adenylate cyclase;
PDBTitle: crystal structure of rtx domain block v of adenylate cyclase toxin2 from bordetella pertussis
30d1g9ka1
not modelled 36.4 12
Fold:Single-stranded right-handed beta-helix
Superfamily:beta-Roll
Family:Serralysin-like metalloprotease, C-terminal domain
31c3a0mF_
not modelled 32.0 40
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
32c1k6fB_
not modelled 25.4 32
PDB header:structural protein
Chain: B: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
33c1k6fC_
not modelled 25.4 32
PDB header:structural protein
Chain: C: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
34c1k6fF_
not modelled 25.4 32
PDB header:structural protein
Chain: F: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
35c1k6fD_
not modelled 25.4 32
PDB header:structural protein
Chain: D: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
36c1k6fE_
not modelled 25.4 32
PDB header:structural protein
Chain: E: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
37c1k6fA_
not modelled 25.4 32
PDB header:structural protein
Chain: A: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
38c2cuoC_
not modelled 19.0 33
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
39c2cuoF_
not modelled 19.0 33
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
40c4q1qA_
not modelled 18.8 9
PDB header:cell adhesion
Chain: A: PDB Molecule:adhesin/invasin tiba autotransporter;
PDBTitle: crystal structure of tibc-catalyzed hyper-glycosylated tiba55-3502 fragment
41c3ah9D_
not modelled 17.1 33
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
42d1sata1
not modelled 14.9 9
Fold:Single-stranded right-handed beta-helix
Superfamily:beta-Roll
Family:Serralysin-like metalloprotease, C-terminal domain
43c3ah9F_
not modelled 13.4 35
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
44c3ah9A_
not modelled 12.9 33
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
45c3ah9E_
not modelled 11.8 35
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
46c3ah9C_
not modelled 11.8 35
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
47c3ah9B_
not modelled 11.8 35
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
48c5juhA_
not modelled 9.9 14
PDB header:cell adhesion
Chain: A: PDB Molecule:antifreeze protein;
PDBTitle: crystal structure of c-terminal domain (rv) of mpafp
49c2cuoA_
not modelled 8.8 36
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
50c2cuoE_
not modelled 8.8 36
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
51c2cuoB_
not modelled 8.8 36
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
52c2cuoD_
not modelled 8.8 36
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
53c3admC_
not modelled 8.3 42
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
54c3a0mC_
not modelled 6.9 44
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
55c3abnA_
not modelled 6.3 42
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-asp-gly-(pro-pro-gly)4 at 1.022 a
56c3admB_
not modelled 6.2 42
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
57c3admA_
not modelled 6.2 42
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
58c3admF_
not modelled 6.2 42
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4

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