Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1474c_(-)_1662647_1663210
DateFri Aug 2 13:30:05 BST 2019
Unique Job IDda0d7806b675d04e
SequenceVPKVSEDHLA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:42.863 Y:52.835 Z:61.727
Model (left) based on template c1rktA_
Top template information
PDB header:transcription
Chain: A: PDB Molecule:protein yfir;
PDBTitle: crystal structure of yfir, a putative transcriptional regulator from2 bacillus subtilis
Confidence and coverage
Confidence: 99.9% Coverage: 99%
186 residues ( 99% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1rktA_
99.9 18
PDB header:transcription
Chain: A: PDB Molecule:protein yfir;
PDBTitle: crystal structure of yfir, a putative transcriptional regulator from2 bacillus subtilis
2c4ac6A_
99.9 54
PDB header:transcription
Chain: A: PDB Molecule:hth-type transcriptional repressor acnr;
PDBTitle: corynebacterium glutamicum acnr au derivative structure
3c2pbxB_
99.9 8
PDB header:transcription
Chain: B: PDB Molecule:hemagglutinin/protease regulatory protein;
PDBTitle: vibrio cholerae hapr
4c2nx4A_
99.9 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:transcriptional regulator, tetr family protein;
PDBTitle: the crystal structure of athe putative tetr-family transcriptional2 regulator rha06780 from rhodococcus sp. rha1.
5c2hyjA_
99.9 16
PDB header:transcription
Chain: A: PDB Molecule:putative tetr-family transcriptional regulator;
PDBTitle: the crystal structure of a tetr-family transcriptional regulator from2 streptomyces coelicolor
6c3qbmA_
99.9 15
PDB header:transcription regulator
Chain: A: PDB Molecule:tetr transcriptional regulator;
PDBTitle: crystal structure of a tetr transcriptional regulator (caur_2221) from2 chloroflexus aurantiacus j-10-fl at 1.80 a resolution
7c2id3A_
99.9 13
PDB header:transcription
Chain: A: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of transcriptional regulator sco5951 from2 streptomyces coelicolor a3(2)
8c5vl9D_
99.9 16
PDB header:transcription/dna
Chain: D: PDB Molecule:regulatory protein tetr;
PDBTitle: crystal structure of eilr in complex with eilo dna element
9c3eupA_
99.9 13
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: the crystal structure of the transcriptional regulator, tetr family2 from cytophaga hutchinsonii
10c2zb9A_
99.9 17
PDB header:transcription
Chain: A: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of tetr family transcription regulator2 sco0332
11c2g7sA_
99.9 14
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: the crystal structure of transcriptional regulator, tetr family, from2 agrobacterium tumefaciens
12c3vibD_
99.9 17
PDB header:dna binding protein
Chain: D: PDB Molecule:mtrr;
PDBTitle: structural basis for multidrug recognition and antimicrobial2 resistance by mtrr, an efflux pump regulator from neisseria3 gonorrhoeae
13c2g3bB_
99.9 17
PDB header:transcription
Chain: B: PDB Molecule:putative tetr-family transcriptional regulator;
PDBTitle: crystal structure of putative tetr-family transcriptional regulator2 from rhodococcus sp.
14c2fq4A_
99.9 8
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: the crystal structure of the transcriptional regulator (tetr family)2 from bacillus cereus
15c2f07A_
99.9 15
PDB header:transcription
Chain: A: PDB Molecule:yvdt;
PDBTitle: crystal structure of yvdt from bacillus subtilis
16c6ayhA_
99.9 23
PDB header:transcription
Chain: A: PDB Molecule:tetr family transcriptional regulator;
PDBTitle: salmonella enterica gusr
17c5gpcC_
99.9 19
PDB header:transcription, dna binding protein/dna
Chain: C: PDB Molecule:transcriptional regulator (tetr/acrr family);
PDBTitle: structural analysis of fatty acid degradation regulator fadr from2 bacillus halodurans
18c4yzeD_
99.9 13
PDB header:transcription
Chain: D: PDB Molecule:hth-type transcriptional repressor nemr;
PDBTitle: crystal structure of e.coli nemr reduced form
19c3e7qB_
99.9 19
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: the crystal structure of the putative transcriptional regulator from2 pseudomonas aeruginosa pao1
20c3lwjA_
99.9 12
PDB header:transcription regulator
Chain: A: PDB Molecule:putative tetr-family transcriptional regulator;
PDBTitle: crystal structure of putative tetr-family transcriptional regulator2 (yp_752756.1) from syntrophomonas wolfei str. goettingen at 2.07 a3 resolution
21c4ichA_
not modelled 99.8 18
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of a putative tetr family transcriptional regulator2 from saccharomonospora viridis dsm 43017
22c2wuiA_
not modelled 99.8 23
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of mexz, a key repressor responsible for2 antibiotic resistance in pseudomonas aeruginosa.
23c3knwB_
not modelled 99.8 16
PDB header:transcription regulator
Chain: B: PDB Molecule:putative transcriptional regulator (tetr/acrr family);
PDBTitle: crystal structure of a putative transcriptional regulator (tetr/acrr2 family member) from putative transcriptional regulator (tetr/acrr3 family)
24c4me9B_
not modelled 99.8 15
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of a transcriptional regulator, tetr family2 (bce_2991) from bacillus cereus atcc 10987 at 2.50 a resolution
25c4w97A_
not modelled 99.8 18
PDB header:transcription
Chain: A: PDB Molecule:hth-type transcriptional repressor kstr2;
PDBTitle: structure of ketosteroid transcriptional regulator kstr2 of2 mycobacterium tuberculosis
26c3vprA_
not modelled 99.8 18
PDB header:dna binding protein
Chain: A: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of a tetr family transcriptional regulator pfmr from2 thermus thermophilus hb8
27c5dajB_
not modelled 99.8 16
PDB header:transcription regulator
Chain: B: PDB Molecule:nald;
PDBTitle: crystal structure of nald, the secondary repressor of mexab-oprm2 multidrug efflux pump in pseudomonas aeruginosa
28c3bruA_
not modelled 99.8 15
PDB header:transcription
Chain: A: PDB Molecule:regulatory protein, tetr family;
PDBTitle: crystal structure of regulatory protein tetr from rhodobacter2 sphaeroides
29c2uxoB_
not modelled 99.8 20
PDB header:transcription
Chain: B: PDB Molecule:hth-type transcriptional regulator ttgr;
PDBTitle: ttgr in complex with tetracycline
30c3pasA_
not modelled 99.8 16
PDB header:transcription regulator
Chain: A: PDB Molecule:tetr family transcription regulator;
PDBTitle: crystal structure of a tetr family transcription regulator (maqu_1417)2 from marinobacter aquaeolei vt8 at 1.90 a resolution
31c1u9nA_
not modelled 99.8 17
PDB header:dna binding protein
Chain: A: PDB Molecule:transcriptional repressor ethr;
PDBTitle: crystal structure of the transcriptional regulator ethr in2 a ligand bound conformation opens therapeutic perspectives3 against tuberculosis and leprosy
32c3nrgA_
not modelled 99.8 17
PDB header:transcription
Chain: A: PDB Molecule:tetr family transcriptional regulator;
PDBTitle: crystal structure of a tetr family transcriptional regulator2 (caur_2714) from chloroflexus aurantiacus j-10-fl at 2.56 a3 resolution
33c2i10A_
not modelled 99.8 18
PDB header:transcription
Chain: A: PDB Molecule:putative tetr transcriptional regulator;
PDBTitle: putative tetr transcriptional regulator from rhodococcus sp. rha1
34c2iaiA_
not modelled 99.8 19
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative transcriptional regulator sco3833;
PDBTitle: crystal structure of sco3833, a member of the tetr transcriptional2 regulator family from streptomyces coelicolor a3
35c6ayiA_
not modelled 99.8 21
PDB header:transcription
Chain: A: PDB Molecule:hth-type transcriptional regulator uidr;
PDBTitle: escherichia coli gusr
36c3bhqB_
not modelled 99.8 19
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of a putative tetr-family transcriptional regulator2 (mlr_4833) from mesorhizobium loti maff303099 at 1.54 a resolution
37c1vi0B_
not modelled 99.8 15
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of a transcriptional regulator
38c3himA_
not modelled 99.8 16
PDB header:transcription regulator
Chain: A: PDB Molecule:probable transcriptional regulator;
PDBTitle: the crystal structure of a bacterial regulatory protein in the tetr2 family from rhodococcus rha1 to 2.2a
39c3dcfB_
not modelled 99.8 21
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator of the tetr/acrr family;
PDBTitle: crystal structure of transcriptional regulator of the tetr/acrr family2 (yp_290855.1) from thermobifida fusca yx-er1 at 2.50 a resolution
40c2gfnA_
not modelled 99.8 20
PDB header:transcription
Chain: A: PDB Molecule:hth-type transcriptional regulator pksa related protein;
PDBTitle: crystal structure of hth-type transcriptional regulator pksa related2 protein from rhodococcus sp. rha1
41c5ztcA_
not modelled 99.8 15
PDB header:transcription
Chain: A: PDB Molecule:lmo2088 protein;
PDBTitle: apo structure of tetr family transcription regulator lmo2088 of2 listeria monocytogenes egde
42c3kkcB_
not modelled 99.8 16
PDB header:transcription regulator
Chain: B: PDB Molecule:tetr family transcriptional regulator;
PDBTitle: the crystal structure of tetr transcriptional regulator from2 streptococcus agalactiae 2603v
43c3f0cA_
not modelled 99.8 16
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of transcriptional regulator from cytophaga2 hutchinsonii atcc 33406
44c3he0A_
not modelled 99.8 20
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: the structure of a putative transcriptional regulator tetr family2 protein from vibrio parahaemolyticus.
45c2genA_
not modelled 99.8 19
PDB header:transcription
Chain: A: PDB Molecule:probable transcriptional regulator;
PDBTitle: structural genomics, the crystal structure of a probable2 transcriptional regulator from pseudomonas aeruginosa pao1
46c3on2C_
not modelled 99.8 21
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:probable transcriptional regulator;
PDBTitle: structure of a protein with unknown function from rhodococcus sp. rha1
47c2rasB_
not modelled 99.8 15
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of a putative tetr/acrr family transcriptional2 regulator (saro_0558) from novosphingobium aromaticivorans dsm at3 1.80 a resolution
48c3anpD_
not modelled 99.8 18
PDB header:transcription
Chain: D: PDB Molecule:transcriptional repressor, tetr family;
PDBTitle: crystal structure of thermus thermophilus fadr, a tetr familly2 transcriptional repressor, in complex with lauroyl-coa.
49c5ovyA_
not modelled 99.8 15
PDB header:dna binding protein
Chain: A: PDB Molecule:putative transcriptional regulator, tetr family;
PDBTitle: crystal structure of mab_4384 tetr
50c1jumB_
not modelled 99.8 12
PDB header:transcription
Chain: B: PDB Molecule:hypothetical transcriptional regulator in qaca 5'region;
PDBTitle: crystal structure of the multidrug binding transcriptional repressor2 qacr bound to the natural drug berberine
51c3rd3B_
not modelled 99.8 14
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulator;
PDBTitle: structure of pseudomonas aeruginosa transcriptional regulator pa2196
52c3rh2A_
not modelled 99.8 14
PDB header:dna binding protein
Chain: A: PDB Molecule:hypothetical tetr-like transcriptional regulator;
PDBTitle: crystal structure of a tetr-like transcriptional regulator (sama_0099)2 from shewanella amazonensis sb2b at 2.42 a resolution
53c3bcgA_
not modelled 99.8 18
PDB header:transcription regulator
Chain: A: PDB Molecule:hth-type transcriptional regulator acrr;
PDBTitle: conformational changes of the acrr regulator reveal a2 mechanism of induction
54c3dewA_
not modelled 99.8 16
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: the structure of a putative tetr family transcriptional regulator from2 geobacter sulfurreducens pca.
55c3mvpA_
not modelled 99.8 15
PDB header:transcription regulator
Chain: A: PDB Molecule:tetr/acrr transcriptional regulator;
PDBTitle: the crystal structure of a tetr/acrr transcriptional regulator from2 streptococcus mutans to 1.85a
56c2o7tA_
not modelled 99.8 16
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of a tetr family transcriptional regulator2 (ncgl1578, cgl1640) from corynebacterium glutamicum at 2.10 a3 resolution
57c3cwrA_
not modelled 99.8 14
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of transcriptional regulator of tetr family2 (yp_425770.1) from rhodospirillum rubrum atcc 11170 at 1.50 a3 resolution
58c2hkuB_
not modelled 99.8 13
PDB header:transcription regulator
Chain: B: PDB Molecule:a putative transcriptional regulator;
PDBTitle: structural genomics, the crystal structure of a putative2 transcriptional regulator from rhodococcus sp. rha1
59c6azhA_
not modelled 99.8 14
PDB header:transcription
Chain: A: PDB Molecule:tetr family transcriptional regulator;
PDBTitle: clostridium perfringens putative fatty acid metabolism regulator
60c5n1cA_
not modelled 99.8 21
PDB header:dna binding protein
Chain: A: PDB Molecule:probable transcriptional regulatory protein;
PDBTitle: iodinated form of the mycobacterium tuberculosis repressor ethr2
61c3dpjB_
not modelled 99.8 19
PDB header:dna binding protein
Chain: B: PDB Molecule:transcription regulator, tetr family;
PDBTitle: the crystal structure of a tetr transcription regulator2 from silicibacter pomeroyi dss
62c2hytA_
not modelled 99.8 17
PDB header:transcription
Chain: A: PDB Molecule:tetr-family transcriptional regulator;
PDBTitle: crystal structure of a tetr-family transcriptional regulator (eca1819)2 from pectobacterium atrosepticum at 1.64 a resolution
63c1pb6D_
not modelled 99.8 14
PDB header:transcription
Chain: D: PDB Molecule:hypothetical transcriptional regulator ycdc;
PDBTitle: crystal structure of hypothetical transcriptional regulator ycdc
64c5xazD_
not modelled 99.8 18
PDB header:dna binding protein
Chain: D: PDB Molecule:gamma-butyrolactone receptor protein;
PDBTitle: crystal structure of full length native tylp, a tetr regulator from2 streptomyces fradiae
65c4jl3B_
not modelled 99.8 11
PDB header:transcription/dna
Chain: B: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of ms6564-dna complex
66c3vuqD_
not modelled 99.8 18
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator (tetr/acrr family);
PDBTitle: crystal structure of ttha0167, a transcriptional regulator, tetr/acrr2 family from thermus thermophilus hb8
67c2d6yA_
not modelled 99.8 14
PDB header:gene regulation
Chain: A: PDB Molecule:putative tetr family regulatory protein;
PDBTitle: crystal structure of transcriptional factor sco4008 from streptomyces2 coelicolor a3(2)
68c3gziA_
not modelled 99.8 18
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of a transcriptional regulator of the tetr family2 (shew_3567) from shewanella loihica pv-4 at 2.05 a resolution
69c2rekA_
not modelled 99.8 16
PDB header:transcription
Chain: A: PDB Molecule:putative tetr-family transcriptional regulator;
PDBTitle: crystal structure of tetr-family transcriptional regulator
70c5k7fA_
not modelled 99.8 14
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of apo aibr
71c5mwrB_
not modelled 99.8 13
PDB header:transcription
Chain: B: PDB Molecule:tetr family transcriptional regulator;
PDBTitle: the fadr transcription regulator from sulfolobus acidocaldarius
72c2raeA_
not modelled 99.8 13
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, acrr family protein;
PDBTitle: crystal structure of a tetr/acrr family transcriptional regulator from2 rhodococcus sp. rha1
73c3ppbB_
not modelled 99.8 13
PDB header:transcription regulator
Chain: B: PDB Molecule:putative tetr family transcription regulator;
PDBTitle: crystal structure of a putative tetr family transcription regulator2 (shew_3104) from shewanella sp. pv-4 at 2.10 a resolution
74c4nn1A_
not modelled 99.8 17
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of transcriptional regulator rv1219c of2 mycobacterium tuberculosis
75c6g8hC_
not modelled 99.8 16
PDB header:transcription
Chain: C: PDB Molecule:tetr/acrr family transcriptional regulator;
PDBTitle: flavonoid-responsive regulator frra in complex with naringenin
76c1ui6B_
not modelled 99.8 16
PDB header:antibiotic
Chain: B: PDB Molecule:a-factor receptor homolog;
PDBTitle: crystal structure of gamma-butyrolactone receptor (arpa-like protein)
77c5d19A_
not modelled 99.8 18
PDB header:transcription
Chain: A: PDB Molecule:tetr family transcriptional regulator;
PDBTitle: crystal structure of mycobacterium tuberculosis rv0302, form ii
78c4udsA_
not modelled 99.8 16
PDB header:transcription
Chain: A: PDB Molecule:mbdr regulator;
PDBTitle: crystal structure of mbdr regulator from azoarcus sp. cib
79c4gctA_
not modelled 99.8 18
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:nucleoid occlusion factor slma;
PDBTitle: structure of no factor protein-dna complex
80c2ibdB_
not modelled 99.8 21
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:possible transcriptional regulator;
PDBTitle: crystal structure of probable transcriptional regulatory protein2 rha5900
81c3g7rB_
not modelled 99.8 16
PDB header:transcription regulator
Chain: B: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of sco4454, a tetr-family transcriptional regulator2 from streptomyces coelicolor
82c2iu5A_
not modelled 99.8 10
PDB header:transcription
Chain: A: PDB Molecule:hth-type dhaklm operon transcriptional activator dhas;
PDBTitle: dihydroxyacetone kinase operon activator dhas
83c3b81A_
not modelled 99.8 13
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, acrr family;
PDBTitle: crystal structure of predicted dna-binding transcriptional regulator2 of tetr/acrr family (np_350189.1) from clostridium acetobutylicum at3 2.10 a resolution
84c1zkgB_
not modelled 99.8 18
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of transcriptional regulator, tetr family (tm1030)2 from thermotoga maritima at 2.30 a resolution
85c3lsjA_
not modelled 99.8 16
PDB header:transcription
Chain: A: PDB Molecule:dest;
PDBTitle: crystal structure of dest in complex with palmitoyl-coa
86c3f1bA_
not modelled 99.8 17
PDB header:transcription regulator
Chain: A: PDB Molecule:tetr-like transcriptional regulator;
PDBTitle: the crystal structure of a tetr-like transcriptional regulator from2 rhodococcus sp. rha1.
87c2np5A_
not modelled 99.8 18
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of a transcriptional regulator (rha1_ro04179) from2 rhodococcus sp. rha1.
88c3bjbE_
not modelled 99.8 11
PDB header:transcription regulator
Chain: E: PDB Molecule:probable transcriptional regulator, tetr family protein;
PDBTitle: crystal structure of a tetr transcriptional regulator from rhodococcus2 sp. rha1
89c3ccyA_
not modelled 99.8 12
PDB header:transcription regulator
Chain: A: PDB Molecule:putative tetr-family transcriptional regulator;
PDBTitle: crystal structure of a tetr-family transcriptional regulator from2 bordetella parapertussis 12822
90c2qibA_
not modelled 99.8 14
PDB header:transcription
Chain: A: PDB Molecule:tetr-family transcriptional regulator;
PDBTitle: crystal structure of tetr-family transcriptional regulator from2 streptomyces coelicolor
91c4za6A_
not modelled 99.8 18
PDB header:signaling protein
Chain: A: PDB Molecule:tetr family transcriptional regulator;
PDBTitle: structure of the r. erythropolis transcriptional repressor qsdr from2 tetr family
92c3on4D_
not modelled 99.8 16
PDB header:transcription
Chain: D: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of tetr transcriptional regulator from legionella2 pneumophila
93c2qwtA_
not modelled 99.8 20
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of the tetr transcription regulatory protein from2 mycobacterium vanbaalenii
94c3c2bA_
not modelled 99.8 16
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of tetr transcriptional regulator from agrobacterium2 tumefaciens
95c4cgrA_
not modelled 99.8 17
PDB header:transcription
Chain: A: PDB Molecule:putative tetr-family transcriptional regulator;
PDBTitle: structure of regulator protein sco3201 from streptomyces coelicolor
96c2of7A_
not modelled 99.8 14
PDB header:transcription
Chain: A: PDB Molecule:putative tetr-family transcriptional regulator;
PDBTitle: structural genomics, the crystal structure of a tetr-family2 transcriptional regulator from streptomyces coelicolor a3
97c2qtqB_
not modelled 99.8 16
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of a predicted dna-binding transcriptional regulator2 (saro_1072) from novosphingobium aromaticivorans dsm at 1.85 a3 resolution
98c3cjdB_
not modelled 99.8 19
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of putative tetr transcriptional regulator2 (yp_510936.1) from jannaschia sp. ccs1 at 1.79 a resolution
99c3nnrA_
not modelled 99.8 14
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, tetr family;
PDBTitle: crystal structure of a tetr-family transcriptional regulator2 (maqu_3571) from marinobacter aquaeolei vt8 at 2.49 a resolution
100c2zcmB_
not modelled 99.8 13
PDB header:transcription
Chain: B: PDB Molecule:biofilm operon icaabcd hth-type negative transcriptional
PDBTitle: crystal structure of icar, a repressor of the tetr family
101c3s5rA_
not modelled 99.8 13
PDB header:dna binding protein
Chain: A: PDB Molecule:transcriptional regulator tetr family;
PDBTitle: crystal structure of a putative transcriptional regulator of the tetr2 family (syn_02108) from syntrophus aciditrophicus at 2.60 a3 resolution
102c4mk6A_
not modelled 99.8 11
PDB header:transcription regulator
Chain: A: PDB Molecule:probable dihydroxyacetone kinase regulator dhsk_reg;
PDBTitle: crystal structure of probable dihydroxyacetone kinase regulator2 dhsk_reg from listeria monocytogenes egd-e
103c2q24A_
not modelled 99.8 20
PDB header:transcription
Chain: A: PDB Molecule:putative tetr family transcriptional regulator;
PDBTitle: crystal structure of tetr transcriptional regulator sco0520 from2 streptomyces coelicolor
104c1t33B_
not modelled 99.8 15
PDB header:transcription
Chain: B: PDB Molecule:putative transcriptional repressor (tetr/acrr family);
PDBTitle: structural genomics, the crystal structure of a putative2 transcriptional repressor (tetr/acrr family) from salmonella3 typhimurim lt2
105c1sgmA_
not modelled 99.8 13
PDB header:transcription
Chain: A: PDB Molecule:putative hth-type transcriptional regulator yxaf;
PDBTitle: crystal structure of hypothetical protein yxaf
106c3npiB_
not modelled 99.8 15
PDB header:gene regulation
Chain: B: PDB Molecule:tetr family regulatory protein;
PDBTitle: crystal structure of a tetr family regulatory protein (dip1788) from2 corynebacterium diphtheriae at 2.96 a resolution
107c3qkxB_
not modelled 99.8 14
PDB header:transcription regulator
Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator hi_0893;
PDBTitle: crystal structure of a tetr-family transcriptional regulator (hi0893)2 from haemophilus influenzae rd at 2.35 a resolution
108c3cdlA_
not modelled 99.8 17
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator aefr;
PDBTitle: crystal structure of a tetr family transcriptional regulator from2 pseudomonas syringae pv. tomato str. dc3000
109c2zcxA_
not modelled 99.8 16
PDB header:transcription
Chain: A: PDB Molecule:tetr-family transcriptional regulator;
PDBTitle: crystal structure of tetr family transcriptional regulator2 sco7815
110c3mnlA_
not modelled 99.8 15
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulatory protein (probably tetr-family);
PDBTitle: the crystal structure of kstr (rv3574) from mycobacterium tuberculosis2 h37rv
111c3c07B_
not modelled 99.8 17
PDB header:transcription regulator
Chain: B: PDB Molecule:putative tetr-family transcriptional regulator;
PDBTitle: crystal structure of a tetr family transcriptional regulator from2 streptomyces coelicolor a3(2)
112c3vw0D_
not modelled 99.8 14
PDB header:transcription regulator
Chain: D: PDB Molecule:putative regulatory protein;
PDBTitle: crystal structure of the dequalinum-bound form of ramr2 (transcriptional regulator of tetr family) from salmonella3 typhimurium
113c3geuC_
not modelled 99.8 13
PDB header:cell adhesion
Chain: C: PDB Molecule:intercellular adhesion protein r;
PDBTitle: crystal structure of icar from staphylococcus aureus, a member of the2 tetracycline repressor protein family
114c5d1wD_
not modelled 99.8 17
PDB header:transcription
Chain: D: PDB Molecule:rv3249c transcriptional regulator;
PDBTitle: crystal structure of mycobacterium tuberculosis rv3249c2 transcriptional regulator.
115c2oi8A_
not modelled 99.8 17
PDB header:transcription
Chain: A: PDB Molecule:putative regulatory protein sco4313;
PDBTitle: crystal structure of putative regulatory protein sco4313
116c3g56A_
not modelled 99.8 13
PDB header:dna binding protein
Chain: A: PDB Molecule:regulator of macrolide 2'-phosphotransferase i;
PDBTitle: structure of the macrolide biosensor protein, mphr(a)
117c3o60A_
not modelled 99.8 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lin0861 protein;
PDBTitle: the crystal structure of lin0861 from listeria innocua to 2.8a
118c2fbqA_
not modelled 99.8 18
PDB header:transcription
Chain: A: PDB Molecule:probable transcriptional regulator;
PDBTitle: the crystal structure of transcriptional regulator pa3006
119c3colB_
not modelled 99.8 12
PDB header:transcription regulator
Chain: B: PDB Molecule:putative transcription regulator;
PDBTitle: crystal structure of putative transcription regulator from2 lactobacillus plantarum
120c3aqsD_
not modelled 99.7 15
PDB header:transcription regulator
Chain: D: PDB Molecule:bacterial regulatory proteins, tetr family;
PDBTitle: crystal structure of rolr (ncgl1110) without ligand

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below