Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1491c_(-)_1681214_1681972
DateFri Aug 2 13:30:07 BST 2019
Unique Job ID15b0ef99d9d3a5a4
SequenceVTAPAICNTT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:22.071 Y:26.615 Z:21.181
Model (left) based on template c5d7tC_
Top template information
PDB header:transport protein
Chain: C: PDB Molecule:s-component for folate;
PDBTitle: folate ecf transporter: apo state
Confidence and coverage
Confidence: 90.1% Coverage: 13%
32 residues ( 13% of your sequence) have been modelled with 90.1% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5d7tC_



90.1 25
PDB header:transport protein
Chain: C: PDB Molecule:s-component for folate;
PDBTitle: folate ecf transporter: apo state
2c4huqS_



86.6 15
PDB header:hydrolase
Chain: S: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a transporter
3c4z7fD_



84.5 10
PDB header:transport protein
Chain: D: PDB Molecule:folate ecf transporter;
PDBTitle: crystal structure of folt bound with folic acid
4c3p5nA_



64.1 25
PDB header:transport protein
Chain: A: PDB Molecule:riboflavin uptake protein;
PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter
5c4hzuS_



61.1 11
PDB header:hydrolase, transport protein
Chain: S: PDB Molecule:predicted membrane protein;
PDBTitle: structure of a bacterial energy-coupling factor transporter
6d1xmea1



59.4 17
Fold:Cytochrome c oxidase subunit I-like
Superfamily:Cytochrome c oxidase subunit I-like
Family:Cytochrome c oxidase subunit I-like
7c2jp3A_



35.3 18
PDB header:transcription
Chain: A: PDB Molecule:fxyd domain-containing ion transport regulator 4;
PDBTitle: solution structure of the human fxyd4 (chif) protein in sds2 micelles
8c6c14A_



30.8 14
PDB header:membrane protein, metal transport
Chain: A: PDB Molecule:protocadherin-15;
PDBTitle: cryoem structure of mouse pcdh15-1ec-lhfpl5 complex
9c6humB_



17.7 12
PDB header:proton transport
Chain: B: PDB Molecule:nad(p)h-quinone oxidoreductase subunit 2;
PDBTitle: structure of the photosynthetic complex i from thermosynechococcus2 elongatus
10c2b2hA_



16.6 12
PDB header:transport protein
Chain: A: PDB Molecule:ammonium transporter;
PDBTitle: ammonium transporter amt-1 from a. fulgidus (as)
11c5n9yB_



11.9 13
PDB header:membrane protein
Chain: B: PDB Molecule:zinc transport protein zntb;
PDBTitle: the full-length structure of zntb
12c3rkoM_



11.7 11
PDB header:oxidoreductase
Chain: M: PDB Molecule:nadh-quinone oxidoreductase subunit m;
PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution
13c1ciiA_



8.9 14
PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia
14c5edlA_



8.7 18
PDB header:transport protein
Chain: A: PDB Molecule:putative hmp/thiamine permease protein ykoe;
PDBTitle: crystal structure of an s-component of ecf transporter
15c4j8cA_



8.4 29
PDB header:chaperone
Chain: A: PDB Molecule:hsc70-interacting protein;
PDBTitle: crystal structure of the dimerization domain of hsc70-interacting2 protein
16c4j8cB_



8.4 29
PDB header:chaperone
Chain: B: PDB Molecule:hsc70-interacting protein;
PDBTitle: crystal structure of the dimerization domain of hsc70-interacting2 protein
17c4djiA_



8.1 10
PDB header:transport protein
Chain: A: PDB Molecule:probable glutamate/gamma-aminobutyrate antiporter;
PDBTitle: structure of glutamate-gaba antiporter gadc
18d1ciia1



6.8 19
Fold:Toxins' membrane translocation domains
Superfamily:Colicin
Family:Colicin
19c5oonA_



6.5 18
PDB header:membrane protein
Chain: A: PDB Molecule:undecaprenyl-diphosphatase;
PDBTitle: structure of undecaprenyl-pyrophosphate phosphatase, baca
20c2na6B_



6.2 28
PDB header:apoptosis
Chain: B: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of mouse fas/cd95 death receptor
21c2na6C_



not modelled 6.2 28
PDB header:apoptosis
Chain: C: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of mouse fas/cd95 death receptor
22c2na6A_



not modelled 6.2 28
PDB header:apoptosis
Chain: A: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of mouse fas/cd95 death receptor
23c1zrtD_



not modelled 6.1 10
PDB header:oxidoreductase/metal transport
Chain: D: PDB Molecule:cytochrome c1;
PDBTitle: rhodobacter capsulatus cytochrome bc1 complex with2 stigmatellin bound
24d1pw4a_



not modelled 5.9 22
Fold:MFS general substrate transporter
Superfamily:MFS general substrate transporter
Family:Glycerol-3-phosphate transporter
25c4ev6E_



not modelled 5.9 10
PDB header:metal transport
Chain: E: PDB Molecule:magnesium transport protein cora;
PDBTitle: the complete structure of cora magnesium transporter from2 methanocaldococcus jannaschii
26d1kpla_



not modelled 5.8 24
Fold:Clc chloride channel
Superfamily:Clc chloride channel
Family:Clc chloride channel

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below