Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1517_(-)_1708877_1709641
DateFri Aug 2 13:30:10 BST 2019
Unique Job ID10709d86191658cc
SequenceMWTMVLLLGL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:55.224 Y:51.298 Z:54.577
Model (left) based on template c5vkvA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:cytochrome c-type biogenesis protein ccda;
PDBTitle: solution nmr structure of the membrane electron transporter ccda
Confidence and coverage
Confidence: 96.4% Coverage: 76%
192 residues ( 76% of your sequence) have been modelled with 96.4% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5vkvA_



96.4 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:cytochrome c-type biogenesis protein ccda;
PDBTitle: solution nmr structure of the membrane electron transporter ccda
2d2o8pa1



18.0 30
Fold:alpha-alpha superhelix
Superfamily:14-3-3 protein
Family:14-3-3 protein
3d1rc2a_



17.8 26
Fold:Aquaporin-like
Superfamily:Aquaporin-like
Family:Aquaporin-like
4c5wlbF_



17.4 50
PDB header:protein binding
Chain: F: PDB Molecule:225-15 b;
PDBTitle: kras g12v, bound to gppnhp and miniprotein 225-15a/b
5c5wlbC_



15.6 50
PDB header:protein binding
Chain: C: PDB Molecule:225-15 b;
PDBTitle: kras g12v, bound to gppnhp and miniprotein 225-15a/b
6c6o4mA_



13.8 21
PDB header:toxin
Chain: A: PDB Molecule:melittin;
PDBTitle: racemic melittin
7c6o4mB_



13.8 21
PDB header:toxin
Chain: B: PDB Molecule:melittin;
PDBTitle: racemic melittin
8c6dstA_



13.8 21
PDB header:toxin
Chain: A: PDB Molecule:melittin;
PDBTitle: recombinant melittin
9c2mltB_



13.8 21
PDB header:toxin (hemolytic polypeptide)
Chain: B: PDB Molecule:melittin;
PDBTitle: melittin
10c2mltA_



13.8 21
PDB header:toxin (hemolytic polypeptide)
Chain: A: PDB Molecule:melittin;
PDBTitle: melittin
11d3efza1



13.0 27
Fold:alpha-alpha superhelix
Superfamily:14-3-3 protein
Family:14-3-3 protein
12c3efzA_



13.0 27
PDB header:signaling protein
Chain: A: PDB Molecule:14-3-3 protein;
PDBTitle: crystal structure of a 14-3-3 protein from cryptosporidium parvum2 (cgd1_2980)
13c6a9wA_



12.4 45
PDB header:replication
Chain: A: PDB Molecule:primase;
PDBTitle: structure of the bifunctional dna primase-polymerase from phage nrs-1
14c2mw6A_



12.2 25
PDB header:toxin
Chain: A: PDB Molecule:melittin;
PDBTitle: structure of the bee venom toxin melittin with [(c5h5)ru]+ fragment2 attached to the tryptophan residue
15c2npmB_



10.8 60
PDB header:protein binding
Chain: B: PDB Molecule:14-3-3 domain containing protein;
PDBTitle: crystal structure of cryptosporidium parvum 14-3-3 protein in complex2 with peptide
16c1bh1A_



10.6 27
PDB header:toxin
Chain: A: PDB Molecule:melittin;
PDBTitle: structural studies of d-pro melittin, nmr, 20 structures
17c2n1pA_



10.3 31
PDB header:viral protein
Chain: A: PDB Molecule:non-structural protein 5b, ns5b;
PDBTitle: structure of the c-terminal membrane domain of hcv ns5b protein
18d1o9da_



10.2 60
Fold:alpha-alpha superhelix
Superfamily:14-3-3 protein
Family:14-3-3 protein
19c3bvdC_



9.5 31
PDB header:oxidoreductase
Chain: C: PDB Molecule:cytochrome c oxidase polypeptide 2a;
PDBTitle: structure of surface-engineered cytochrome ba3 oxidase from thermus2 thermophilus under xenon pressure, 100psi 5min
20d1xmec1



9.5 31
Fold:Single transmembrane helix
Superfamily:Bacterial ba3 type cytochrome c oxidase subunit IIa
Family:Bacterial ba3 type cytochrome c oxidase subunit IIa
21d2o02a1



not modelled 9.5 60
Fold:alpha-alpha superhelix
Superfamily:14-3-3 protein
Family:14-3-3 protein
22c3bjrA_



not modelled 9.4 18
PDB header:hydrolase
Chain: A: PDB Molecule:putative carboxylesterase;
PDBTitle: crystal structure of a putative carboxylesterase (lp_1002) from2 lactobacillus plantarum wcfs1 at 2.09 a resolution
23c2c1nA_



not modelled 9.1 60
PDB header:signaling protein
Chain: A: PDB Molecule:14-3-3 protein zeta/delta;
PDBTitle: molecular basis for the recognition of phosphorylated and2 phosphoacetylated histone h3 by 14-3-3
24c3kl4B_



not modelled 8.8 71
PDB header:hydrolase
Chain: B: PDB Molecule:signal peptide of yeast dipeptidyl aminopeptidase b;
PDBTitle: recognition of a signal peptide by the signal recognition particle
25c6iz4G_



not modelled 8.6 13
PDB header:membrane protein
Chain: G: PDB Molecule:trimeric intracellular cation channel type b-b;
PDBTitle: crystal structure analysis of tric counter-ion channels in calcium2 release
26c3e6yB_



not modelled 8.4 60
PDB header:signaling protein
Chain: B: PDB Molecule:14-3-3-like protein c;
PDBTitle: structure of 14-3-3 in complex with the differentiation-inducing agent2 cotylenin a
27c1izlC_



not modelled 8.1 45
PDB header:photosynthesis
Chain: C: PDB Molecule:photosystem ii: subunit psbc;
PDBTitle: crystal structure of photosystem ii
28c6iz0A_



not modelled 7.5 18
PDB header:membrane protein
Chain: A: PDB Molecule:trimeric intracellular cation channel type a;
PDBTitle: crystal structure analysis of a eukaryotic membrane protein
29c1izlM_



not modelled 7.4 45
PDB header:photosynthesis
Chain: M: PDB Molecule:photosystem ii: subunit psbc;
PDBTitle: crystal structure of photosystem ii
30c2kv5A_



not modelled 6.6 47
PDB header:toxin
Chain: A: PDB Molecule:putative uncharacterized protein rnai;
PDBTitle: solution structure of the par toxin fst in dpc micelles
31d2axtc1



not modelled 6.5 45
Fold:Photosystem II antenna protein-like
Superfamily:Photosystem II antenna protein-like
Family:Photosystem II antenna protein-like
32c2axtc_



not modelled 6.5 45
PDB header:electron transport
Chain: C: PDB Molecule:photosystem ii cp43 protein;
PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus
33d1uptb_



not modelled 6.0 41
Fold:GRIP domain
Superfamily:GRIP domain
Family:GRIP domain
34c5x42B_



not modelled 5.7 31
PDB header:protein transport
Chain: B: PDB Molecule:icmo (dotl);
PDBTitle: structure of dotl(590-659)-dotn derived from legionella pneumophila
35c5ykaA_



not modelled 5.6 25
PDB header:biosynthetic protein
Chain: A: PDB Molecule:uncharacterized protein kdoo;
PDBTitle: crystal structure of the kdo hydroxylase kdoo, a non-heme fe(ii)2 alphaketoglutarate dependent dioxygenase in complex with cobalt(ii)
36c2l1nA_



not modelled 5.5 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of the protein yp_399305.1
37c4ct0B_



not modelled 5.5 17
PDB header:circadian clock protein
Chain: B: PDB Molecule:period circadian protein homolog 2;
PDBTitle: crystal structure of mouse cryptochrome1 in complex with period2

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Transmembrane helix prediction 

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