Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1541c_(lprI)_1743784_1744377
DateFri Aug 2 13:30:13 BST 2019
Unique Job ID739b369241f09dff
SequenceMRWIGVLVTA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:35.287 Y:30.241 Z:39.144
Model (left) based on template c3f6zB_
Top template information
PDB header:hydrolase
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of pseudomonas aeruginosa mlic in complex2 with hen egg white lysozyme
Confidence and coverage
Confidence: 99.6% Coverage: 40%
78 residues ( 40% of your sequence) have been modelled with 99.6% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
165 residues ( 84%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3f6zB_



99.6 23
PDB header:hydrolase
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of pseudomonas aeruginosa mlic in complex2 with hen egg white lysozyme
2d2f09a1



99.5 22
Fold:Streptavidin-like
Superfamily:YdhA-like
Family:YdhA-like
3c3oe3B_



99.4 9
PDB header:hydrolase inhibitor
Chain: B: PDB Molecule:putative periplasmic protein;
PDBTitle: crystal structure of plic-st, periplasmic lysozyme inhibitor of c-type2 lysozyme from salmonella typhimurium
4c6ar7C_



99.3 19
PDB header:unknown function
Chain: C: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative uncharacterized protein from2 burkholderia thailandensis
5c3gi7A_



99.1 25
PDB header:unknown function
Chain: A: PDB Molecule:secreted protein of unknown function duf1311;
PDBTitle: crystal structure of a duf1311 family protein (pp0307) from2 pseudomonas putida kt2440 at 1.85 a resolution
6c5my7A_



81.2 21
PDB header:cell adhesion
Chain: A: PDB Molecule:adhesin;
PDBTitle: adhesin complex protein from neisseria meningitidis
7c4rg8A_



32.7 18
PDB header:hydrolase
Chain: A: PDB Molecule:exonuclease i;
PDBTitle: structural and biochemical studies of a moderately thermophilic2 exonuclease i from methylocaldum szegediense
8d1dn0b2



19.2 15
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C1 set domains (antibody constant domain-like)
9c2n59A_



12.0 21
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein csgh;
PDBTitle: solution structure of r. palustris csgh
10c1yybA_



12.0 15
PDB header:apoptosis
Chain: A: PDB Molecule:programmed cell death protein 5;
PDBTitle: solution structure of 1-26 fragment of human programmed2 cell death 5 protein
11c4r8aF_



10.7 14
PDB header:hydrolase/dna
Chain: F: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of pafan1 - 5' flap dna complex
12c4ribA_



10.7 14
PDB header:hydrolase/dna
Chain: A: PDB Molecule:fanconi-associated nuclease 1;
PDBTitle: fan1 nuclease bound to 5' phosphorylated p(dt) single flap dna
13c1ny9A_



10.0 13
PDB header:transcription
Chain: A: PDB Molecule:transcriptional activator tipa-s;
PDBTitle: antibiotic binding domain of a tipa-class multidrug2 resistance transcriptional regulator
14d1ny9a_



10.0 13
Fold:Antibiotic binding domain of TipA-like multidrug resistance regulators
Superfamily:Antibiotic binding domain of TipA-like multidrug resistance regulators
Family:Antibiotic binding domain of TipA-like multidrug resistance regulators
15c5e9fD_



9.5 13
PDB header:lyase
Chain: D: PDB Molecule:isocitrate lyase;
PDBTitle: structural insights of isocitrate lyases from magnaporthe oryzae
16c6d2cB_



8.9 24
PDB header:lyase
Chain: B: PDB Molecule:ulvan lyase;
PDBTitle: structure of ulvan lyase from nonlaben ulvanivorans- nlr48
17c1ea9D_



8.6 11
PDB header:hydrolase
Chain: D: PDB Molecule:cyclomaltodextrinase;
PDBTitle: cyclomaltodextrinase
18c5ljyA_



6.9 12
PDB header:viral protein
Chain: A: PDB Molecule:envelopment polyprotein;
PDBTitle: structure of hantavirus envelope glycoprotein gc in complex with scfv2 a5
19c6hc2L_



6.8 20
PDB header:cell cycle
Chain: L: PDB Molecule:nuclear mitotic apparatus protein 1;
PDBTitle: crystal structure of numa/lgn hetero-hexamers
20c3f0nB_



6.8 33
PDB header:lyase
Chain: B: PDB Molecule:mevalonate pyrophosphate decarboxylase;
PDBTitle: mus musculus mevalonate pyrophosphate decarboxylase
21c6n10A_



not modelled 5.8 33
PDB header:lyase
Chain: A: PDB Molecule:diphosphomevalonate decarboxylase mvd1, peroxisomal;
PDBTitle: crystal structure of arabidopsis thaliana mevalonate 5-diphosphate2 decarboxylase 1 complexed with (r)-mvapp
22d2qxfa1



not modelled 5.7 20
Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:DnaQ-like 3'-5' exonuclease
23d1osph2



not modelled 5.7 14
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C1 set domains (antibody constant domain-like)
24c4qboA_



not modelled 5.7 5
PDB header:hydrolase
Chain: A: PDB Molecule:nuclease;
PDBTitle: vrr_nuc domain
25c2hkeB_



not modelled 5.7 33
PDB header:lyase
Chain: B: PDB Molecule:diphosphomevalonate decarboxylase, putative;
PDBTitle: mevalonate diphosphate decarboxylase from trypanosoma brucei
26c5lk1A_



not modelled 5.6 12
PDB header:viral protein
Chain: A: PDB Molecule:envelopment polyprotein;
PDBTitle: structure of hantavirus envelope glycoprotein gc in postfusion2 conformation in presence of 200 mm kcl
27c4bg7A_



not modelled 5.4 47
PDB header:replication
Chain: A: PDB Molecule:putative transcriptional coactivator p15;
PDBTitle: bacteriophage t5 homolog of the eukaryotic transcription coactivator2 pc4 implicated in recombination-dependent dna replication
28c5hzpA_



not modelled 5.4 30
PDB header:immune system
Chain: A: PDB Molecule:m protein, serotype 49;
PDBTitle: structure of human c4b-binding protein alpha chain ccp domains 1 and 22 in complex with the hypervariable region of group a streptococcus m493 protein.
29c6c6lN_



not modelled 5.3 16
PDB header:membrane protein
Chain: N: PDB Molecule:v0 assembly protein 1;
PDBTitle: yeast vacuolar atpase vo in lipid nanodisc

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below