Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1546_(-)_1747201_1747632
DateFri Aug 2 13:30:13 BST 2019
Unique Job IDdc8880a638500018
SequenceMASVELSADV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:41.467 Y:40.974 Z:33.527
Model (left) based on template d1t17a_
Top template information
Fold:TBP-like
Superfamily:Bet v1-like
Family:oligoketide cyclase/dehydrase-like
Confidence and coverage
Confidence: 99.9% Coverage:100%
143 residues (100% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1t17a_



99.9 13
Fold:TBP-like
Superfamily:Bet v1-like
Family:oligoketide cyclase/dehydrase-like
2c2kf2A_



99.9 6
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative polyketide cyclase;
PDBTitle: solution nmr structure of of streptomyces coelicolor2 polyketide cyclase sco5315. northeast structural genomics3 consortium target rr365
3d2d4ra1



99.9 19
Fold:TBP-like
Superfamily:Bet v1-like
Family:oligoketide cyclase/dehydrase-like
4d2rera1



99.9 13
Fold:TBP-like
Superfamily:Bet v1-like
Family:oligoketide cyclase/dehydrase-like
5d2ns9a1



99.9 13
Fold:TBP-like
Superfamily:Bet v1-like
Family:CoxG-like
6c4xrwA_



99.9 15
PDB header:lyase
Chain: A: PDB Molecule:bexl;
PDBTitle: crystal structure of the di-domain aro/cyc bexl from the be-7585a2 biosynthetic pathway
7c2m47A_



99.9 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein cgl2373;
PDBTitle: solution nmr structure of the polyketide_cyc-like protein cgl2372 from2 corynebacterium glutamicum, northeast structural genomics consortium3 target cgr160
8c3tfzB_



99.8 13
PDB header:biosynthetic protein
Chain: B: PDB Molecule:cyclase;
PDBTitle: crystal structure of zhui aromatase/cyclase from streptomcyes sp.2 r1128
9c2le1A_



99.8 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of tfu_2981 from thermobifida fusca, northeast2 structural genomics consortium target tfr85a
10c5z8oA_



99.8 16
PDB header:unknown function
Chain: A: PDB Molecule:cyclase/dehydrase;
PDBTitle: structural of start superfamily protein msmeg_0129 from mycobacterium2 smegmatis
11d2b79a1



99.8 13
Fold:TBP-like
Superfamily:Bet v1-like
Family:Smu440-like
12d2pcsa1



99.8 12
Fold:TBP-like
Superfamily:Bet v1-like
Family:CoxG-like
13c3p9vA_



99.8 6
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: high resolution crystal structure of protein maqu_3174 from2 marinobacter aquaeolei, northeast structural genomics consortium3 target mqr197
14c5woxA_



99.8 14
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: nmr solution structure of kany protein (ms6282) using two 4d-spectra
15c2l9pA_



99.8 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of q5hli9 from staphylococcus epidermidis,2 northeast structural genomics consortium target ser147
16c3pu2G_



99.8 22
PDB header:structure genomics, unknown function
Chain: G: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the q3j4m4_rhos4 protein from rhodobacter2 sphaeroides. northeast structural genomics consortium target rhr263.
17d3cnwa1



99.7 11
Fold:TBP-like
Superfamily:Bet v1-like
Family:Atu1531-like
18c4xrtB_



99.7 13
PDB header:lyase
Chain: B: PDB Molecule:stfq aromatase/cyclase;
PDBTitle: crystal structure of the di-domain aro/cyc stfq from the steffimycin2 biosynthetic pathway
19c2lf2A_



99.7 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of the ahsa1-like protein chu_1110 from2 cytophaga hutchinsonii, northeast structural genomics consortium3 target chr152
20c2kczA_



99.7 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein dr_a0006;
PDBTitle: solution nmr structure of the c-terminal domain of protein2 dr_a0006 from deinococcus radiodurans. northeast3 structural genomics consortium target drr147d
21c2ldkA_



not modelled 99.7 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of protein aaur_3427 from arthrobacter2 aurescens, northeast structural genomics consortium target aar96
22c3uidA_



not modelled 99.7 14
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of protein ms6760 from mycobacterium smegmatis
23d1xfsa_



not modelled 99.7 14
Fold:TBP-like
Superfamily:Bet v1-like
Family:AHSA1 domain
24d2qpva1



not modelled 99.7 13
Fold:TBP-like
Superfamily:Bet v1-like
Family:Atu1531-like
25d1z94a1



not modelled 99.7 20
Fold:TBP-like
Superfamily:Bet v1-like
Family:AHSA1 domain
26c4n0gC_



not modelled 99.7 10
PDB header:hydrolase/receptor
Chain: C: PDB Molecule:abscisic acid receptor pyl13;
PDBTitle: crystal structure of pyl13-pp2ca complex
27d1xuva_



not modelled 99.6 8
Fold:TBP-like
Superfamily:Bet v1-like
Family:AHSA1 domain
28d2il5a1



not modelled 99.6 14
Fold:TBP-like
Superfamily:Bet v1-like
Family:AHSA1 domain
29c2leqA_



not modelled 99.6 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: chemical shift assignment and solution structure of chr145 from2 cytophaga hutchinsonii, northeast structural genomics consortium3 target chr145
30c4r7kA_



not modelled 99.6 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein jhp0584;
PDBTitle: 1.88 angstrom resolution crystal structure of hypothetical protein2 jhp0584 from helicobacter pylori.
31c2lghA_



not modelled 99.6 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of the ahsa1-like protein aha_2358 from2 aeromonas hydrophila refined with nh rdcs, northeast structural3 genomics consortium target ahr99.
32c5vglA_



not modelled 99.6 11
PDB header:isomerase
Chain: A: PDB Molecule:lachrymatory-factor synthase;
PDBTitle: crystal structure of lachrymatory factor synthase from allium cepa
33c3p51A_



not modelled 99.6 7
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: three-dimensional structure of protein q2y8n9_nitmu from nitrosospira2 multiformis, northeast structural genomics consortium target nmr118
34c3q64A_



not modelled 99.6 10
PDB header:structure genomics, unknown function
Chain: A: PDB Molecule:mll3774 protein;
PDBTitle: x-ray crystal structure of protein mll3774 from mesorhizobium loti,2 northeast structural genomics consortium target mlr405.
35c3rd6A_



not modelled 99.6 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:mll3558 protein;
PDBTitle: crystal structure of mll3558 protein from rhizobium loti. northeast2 structural genomics consortium target id mlr403
36c2lcgA_



not modelled 99.6 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of protein rmet_5065 from ralstonia2 metallidurans, northeast structural genomics consortium target crr115
37c2l8oA_



not modelled 99.5 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of chr148 from cytophaga hutchinsonii, northeast2 structural genomics consortium target chr148
38c3otlA_



not modelled 99.5 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: three-dimensional structure of the putative uncharacterized protein2 from rhizobium leguminosarum at the resolution 1.9a, northeast3 structural genomics consortium target rlr261
39d3elia1



not modelled 99.5 18
Fold:TBP-like
Superfamily:Bet v1-like
Family:AHSA1 domain
40c5e4bB_



not modelled 99.5 11
PDB header:lyase
Chain: B: PDB Molecule:hydroxynitrile lyase;
PDBTitle: hydroxynitrile lyase from the fern davallia tyermanii in complex with2 (r)-mandelonitrile / benzaldehyde
41c2m89A_



not modelled 99.5 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:aha1 domain protein;
PDBTitle: solution structure of the aha1 dimer from colwellia psychrerythraea
42c3qtjA_



not modelled 99.5 13
PDB header:hormone receptor
Chain: A: PDB Molecule:abscisic acid receptor pyl10;
PDBTitle: crystal strcuture of aba receptor pyl10 (apo)
43c3q63F_



not modelled 99.5 18
PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:mll2253 protein;
PDBTitle: x-ray crystal structure of protein mll2253 from mesorhizobium loti,2 northeast structural genomics consortium target mlr404.
44c3oh8A_



not modelled 99.5 10
PDB header:isomerase
Chain: A: PDB Molecule:nucleoside-diphosphate sugar epimerase (sula family);
PDBTitle: crystal structure of the nucleoside-diphosphate sugar epimerase from2 corynebacterium glutamicum. northeast structural genomics consortium3 target cgr91
45c3oquB_



not modelled 99.5 10
PDB header:hormone receptor
Chain: B: PDB Molecule:abscisic acid receptor pyl9;
PDBTitle: crystal structure of native abscisic acid receptor pyl9 with aba
46d1xn5a_



not modelled 99.4 12
Fold:TBP-like
Superfamily:Bet v1-like
Family:AHSA1 domain
47c2nn5A_



not modelled 99.4 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ef_2215;
PDBTitle: structure of conserved protein of unknown function ef2215 from2 enterococcus faecalis
48c4oicA_



not modelled 99.4 13
PDB header:hormone receptor/hydrolase
Chain: A: PDB Molecule:bet v i allergen-like;
PDBTitle: crystal structrual of a soluble protein
49c2luzA_



not modelled 99.4 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:calu16;
PDBTitle: solution nmr structure of calu16 from micromonospora echinospora,2 northeast structural genomics consortium (nesg) target mir12
50d2k5ga1



not modelled 99.4 20
Fold:TBP-like
Superfamily:Bet v1-like
Family:AHSA1 domain
51d2nn5a1



not modelled 99.4 13
Fold:TBP-like
Superfamily:Bet v1-like
Family:AHSA1 domain
52c3q6aH_



not modelled 99.3 9
PDB header:structure genomics, unknown function
Chain: H: PDB Molecule:uncharacterized protein;
PDBTitle: x-ray crystal structure of the protein ssp2350 from staphylococcus2 saprophyticus, northeast structural genomics consortium target syr116
53c3klxB_



not modelled 99.3 11
PDB header:hormone receptor
Chain: B: PDB Molecule:f3n23.20 protein;
PDBTitle: crystal structure of native abscisic acid receptor pyl3
54d1xn6a_



not modelled 99.3 13
Fold:TBP-like
Superfamily:Bet v1-like
Family:AHSA1 domain
55c2kewA_



not modelled 99.3 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein yndb;
PDBTitle: the solution structure of bacillus subtilis sr211 start domain by nmr2 spectroscopy
56d1zxfa1



not modelled 99.3 10
Fold:TBP-like
Superfamily:Bet v1-like
Family:AHSA1 domain
57c4igyB_



not modelled 99.3 8
PDB header:allergen
Chain: B: PDB Molecule:kirola;
PDBTitle: crystal structure of kirola (act d 11) - triclinic form
58c2lakA_



not modelled 99.3 17
PDB header:structure genomics, unknown function
Chain: A: PDB Molecule:ahsa1-like protein rhe_ch02687;
PDBTitle: solution nmr structure of the ahsa1-like protein rhe_ch02687 (1-152)2 from rhizobium etli, northeast structural genomics consortium target3 rer242
59c3k90C_



not modelled 99.3 10
PDB header:hormone receptor, hydrolase regulator
Chain: C: PDB Molecule:putative uncharacterized protein;
PDBTitle: the abscisic acid receptor pyr1 in complex with abscisic acid
60c3kdiA_



not modelled 99.2 11
PDB header:hormone receptor
Chain: A: PDB Molecule:putative uncharacterized protein at2g26040;
PDBTitle: structure of (+)-aba bound pyl2
61d1x53a1



not modelled 99.2 14
Fold:TBP-like
Superfamily:Bet v1-like
Family:AHSA1 domain
62c5ujvA_



not modelled 99.2 12
PDB header:abscisic acid binding protein
Chain: A: PDB Molecule:pyr1;
PDBTitle: crystal structure of fepyr1 in complex with abscisic acid
63c5z4eA_



not modelled 99.1 23
PDB header:biosynthetic protein
Chain: A: PDB Molecule:txno9;
PDBTitle: an anthrahydroquino-gama-pyrone synthase txn09
64c3ni8A_



not modelled 99.1 12
PDB header:unknown function
Chain: A: PDB Molecule:pfc0360w protein;
PDBTitle: crystal structure of pfc0360w, an hsp90 activator from plasmodium2 falciparum
65c2vq5B_



not modelled 99.1 13
PDB header:lyase
Chain: B: PDB Molecule:s-norcoclaurine synthase;
PDBTitle: x-ray structure of norcoclaurine synthase from thalictrum2 flavum in complex with dopamine and hydroxybenzaldehyde
66c3c0vC_



not modelled 99.1 10
PDB header:plant protein
Chain: C: PDB Molecule:cytokinin-specific binding protein;
PDBTitle: crystal structure of cytokinin-specific binding protein in complex2 with cytokinin and ta6br12
67c4rejA_



not modelled 99.1 8
PDB header:protein binding
Chain: A: PDB Molecule:major latex-like protein;
PDBTitle: crystal structure of ginseng major latex-like protein 151 (glp) from2 panax ginseng. (crystal-3)
68d1ifva_



not modelled 99.0 13
Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
69d1icxa_



not modelled 99.0 13
Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
70c2i9yA_



not modelled 99.0 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:major latex protein-like protein 28 or mlp-like
PDBTitle: solution structure of arabidopsis thaliana protein2 at1g70830, a member of the major latex protein family
71c3ie5A_



not modelled 99.0 16
PDB header:plant protein, biosynthetic protein
Chain: A: PDB Molecule:phenolic oxidative coupling protein hyp-1;
PDBTitle: crystal structure of hyp-1 protein from hypericum perforatum (st2 john's wort) involved in hypericin biosynthesis
72d2bk0a1



not modelled 98.9 11
Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
73d1qmra_



not modelled 98.9 15
Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
74c6gq9A_



not modelled 98.9 17
PDB header:allergen
Chain: A: PDB Molecule:major allergen cor a 1.0401;
PDBTitle: solution structure of the hazel allergen cor a 1.0401
75d1e09a_



not modelled 98.9 12
Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
76d1fm4a_



not modelled 98.9 14
Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
77c2k7hA_



not modelled 98.9 14
PDB header:allergen
Chain: A: PDB Molecule:stress-induced protein sam22;
PDBTitle: nmr solution structure of soybean allergen gly m 4
78c3rwsA_



not modelled 98.9 12
PDB header:plant protein
Chain: A: PDB Molecule:mtn13 protein;
PDBTitle: crystal structure of medicago truncatula nodulin 13 (mtn13) in complex2 with trans-zeatin
79c3qszB_



not modelled 98.8 9
PDB header:unknown function
Chain: B: PDB Molecule:star-related lipid transfer protein;
PDBTitle: crystal structure of the star-related lipid transfer protein (fragment2 25-204) from xanthomonas axonopodis at the resolution 2.4a, northeast3 structural genomics consortium target xar342
80d1xdfa1



not modelled 98.7 14
Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
81d1txca1



not modelled 98.7 13
Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
82c3p0lC_



not modelled 98.2 9
PDB header:transport protein
Chain: C: PDB Molecule:steroidogenic acute regulatory protein, mitochondrial;
PDBTitle: human steroidogenic acute regulatory protein
83c2r55B_



not modelled 98.1 9
PDB header:transport protein
Chain: B: PDB Molecule:star-related lipid transfer protein 5;
PDBTitle: human star-related lipid transfer protein 5
84d1jssa_



not modelled 97.8 9
Fold:TBP-like
Superfamily:Bet v1-like
Family:STAR domain
85c1jssB_



not modelled 97.8 9
PDB header:lipid binding protein
Chain: B: PDB Molecule:cholesterol-regulated start protein 4;
PDBTitle: crystal structure of the mus musculus cholesterol-regulated2 start protein 4 (stard4).
86c2mouA_



not modelled 97.8 9
PDB header:transport protein
Chain: A: PDB Molecule:star-related lipid transfer protein 6;
PDBTitle: solution structure of star-related lipid transfer domain protein 62 (stard6)
87c3fo5A_



not modelled 97.7 10
PDB header:lipid transport
Chain: A: PDB Molecule:thioesterase, adipose associated, isoform bfit2;
PDBTitle: human start domain of acyl-coenzyme a thioesterase 11 (acot11)
88d1em2a_



not modelled 97.6 7
Fold:TBP-like
Superfamily:Bet v1-like
Family:STAR domain
89c2e3rB_



not modelled 97.3 11
PDB header:lipid transport
Chain: B: PDB Molecule:lipid-transfer protein cert;
PDBTitle: crystal structure of cert start domain in complex with c18-2 ceramide (p1)
90d1ln1a_



not modelled 96.8 15
Fold:TBP-like
Superfamily:Bet v1-like
Family:STAR domain
91c2lioA_



not modelled 96.5 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of bfr322 from bacteroides fragilis, northeast2 structural genomics consortium target bfr322
92d1vjha_



not modelled 96.2 15
Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
93d2psoa1



not modelled 94.5 12
Fold:TBP-like
Superfamily:Bet v1-like
Family:STAR domain
94d2ffsa1



not modelled 94.2 12
Fold:TBP-like
Superfamily:Bet v1-like
Family:PA1206-like
95c5ys0A_



not modelled 68.3 6
PDB header:transport protein
Chain: A: PDB Molecule:membrane-anchored lipid-binding protein ysp2;
PDBTitle: crystal structure of the second starkin domain of lam2 in complex with2 ergosterol
96c2lafA_



not modelled 66.6 9
PDB header:membrane protein
Chain: A: PDB Molecule:lipoprotein 34;
PDBTitle: nmr solution structure of the n-terminal domain of the e. coli2 lipoprotein bamc
97c2ejxA_



not modelled 65.8 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:stk_08120;
PDBTitle: crystal structure of the hypothetical protein stk_08120 from2 sulfolobus tokodaii
98c3qrzC_



not modelled 50.9 18
PDB header:hormone receptor
Chain: C: PDB Molecule:abscisic acid receptor pyl5;
PDBTitle: crystal structure of native abscisic acid receptor pyl5 at 2.62 angstrom
99c5yqiA_



not modelled 47.9 9
PDB header:transport protein
Chain: A: PDB Molecule:membrane-anchored lipid-binding protein ysp2;
PDBTitle: crystal structure of the first starkin domain of lam2
100c2psoC_



not modelled 43.4 10
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:star-related lipid transfer protein 13;
PDBTitle: human stard13 (dlc2) lipid transfer and protein localization domain
101c5yqjB_



not modelled 37.1 10
PDB header:transport protein
Chain: B: PDB Molecule:membrane-anchored lipid-binding protein lam4;
PDBTitle: crystal structure of the first starkin domain of lam4
102c3w8vA_



not modelled 21.7 27
PDB header:transcription
Chain: A: PDB Molecule:gcn4n coiled coil peptide;
PDBTitle: crystal structure analysis of the synthetic gcn4 coiled coil peptide
103c3w8vB_



not modelled 21.7 27
PDB header:transcription
Chain: B: PDB Molecule:gcn4n coiled coil peptide;
PDBTitle: crystal structure analysis of the synthetic gcn4 coiled coil peptide

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite