Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1558_(-)_1762953_1763399
DateFri Aug 2 13:30:14 BST 2019
Unique Job IDc689430666ad509c
SequenceMPLSGEYAPS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:34.503 Y:38.389 Z:43.019
Model (left) based on template c3r5yC_
Top template information
PDB header:unknown function
Chain: C: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of a deazaflavin-dependent nitroreductase from nocardia2 farcinica, with co-factor f420
Confidence and coverage
Confidence:100.0% Coverage: 94%
139 residues ( 94% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3r5yC_



100.0 53
PDB header:unknown function
Chain: C: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of a deazaflavin-dependent nitroreductase from nocardia2 farcinica, with co-factor f420
2c3r5zB_



100.0 76
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of a deazaflavin-dependent reductase from nocardia2 farcinica, with co-factor f420
3c3h96B_



100.0 33
PDB header:flavoprotein
Chain: B: PDB Molecule:f420-h2 dependent reductase a;
PDBTitle: msmeg_3358 f420 reductase
4c4y9iA_



100.0 54
PDB header:oxidoreductase
Chain: A: PDB Molecule:mycobacterium tuberculosis paralogous family 11;
PDBTitle: structure of f420-h2 dependent reductase (fdr-a) msmeg_2027
5c3r5wO_



100.0 44
PDB header:oxidoreductase
Chain: O: PDB Molecule:deazaflavin-dependent nitroreductase;
PDBTitle: structure of ddn, the deazaflavin-dependent nitroreductase from2 mycobacterium tuberculosis involved in bioreductive activation of pa-3 824, with co-factor f420
6c3f7eB_



99.0 14
PDB header:unknown function
Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-
PDBTitle: msmeg_3380 f420 reductase
7c2iabB_



98.9 16
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a protein with fmn-binding split barrel fold2 (np_828636.1) from streptomyces avermitilis at 2.00 a resolution
8d1rfea_



98.7 21
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
9c3tgvD_



98.6 20
PDB header:heme binding protein
Chain: D: PDB Molecule:heme-binding protein hutz;
PDBTitle: crystal structure of hutz,the heme storsge protein from vibrio2 cholerae
10d2asfa1



98.6 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
11c4zkyB_



98.5 24
PDB header:oxidoreductase
Chain: B: PDB Molecule:pyridoxamine 5-phosphate oxidase;
PDBTitle: structure of f420 binding protein, msmeg_6526, from mycobacterium2 smegmatis
12d1w9aa_



98.4 14
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
13d1vl7a_



98.3 19
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
14c3db0B_



98.3 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:lin2891 protein;
PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_472219.1) from listeria innocua at 2.00 a resolution
15c2htiA_



98.2 15
PDB header:fmn-binding protein
Chain: A: PDB Molecule:bh0577 protein;
PDBTitle: crystal structure of a flavin-nucleotide-binding protein (bh_0577)2 from bacillus halodurans at 2.50 a resolution
16d2htia1



98.2 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
17d2i02a1



98.2 13
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
18c3dnhB_



98.2 19
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein atu2129;
PDBTitle: the crystal structure of the protein atu2129 (unknown function) from2 agrobacterium tumefaciens str. c58
19d2fg9a1



98.1 11
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
20c3gasA_



98.1 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:heme oxygenase;
PDBTitle: crystal structure of helicobacter pylori heme oxygenase hugz2 in complex with heme
21c5bncB_



not modelled 98.0 22
PDB header:heme binding protein
Chain: B: PDB Molecule:heme binding protein msmeg_6519;
PDBTitle: structure of heme binding protein msmeg_6519 from mycobacterium2 smegmatis
22c2hhzA_



not modelled 98.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related2 protein (ssuidraft_2804) from streptococcus suis 89/1591 at 2.00 a3 resolution
23c2ig6B_



not modelled 98.0 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:nimc/nima family protein;
PDBTitle: crystal structure of a nimc/nima family protein (ca_c2569) from2 clostridium acetobutylicum at 1.80 a resolution
24d2arza1



not modelled 98.0 24
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
25d2hq9a1



not modelled 98.0 20
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
26c3ec6A_



not modelled 97.9 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:general stress protein 26;
PDBTitle: crystal structure of the general stress protein 26 from bacillus2 anthracis str. sterne
27c2re7A_



not modelled 97.9 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase related2 protein (psyc_0186) from psychrobacter arcticus 273-4 at 2.50 a3 resolution
28d2hq7a1



not modelled 97.8 12
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
29d2fura1



not modelled 97.7 12
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
30c6eciQ_



not modelled 97.7 21
PDB header:fad-binding protein
Chain: Q: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-binding
PDBTitle: structure of the fad binding protein msmeg_5243 from mycobacterium2 smegmatis
31c5escD_



not modelled 97.7 14
PDB header:oxidoreductase
Chain: D: PDB Molecule:hupz;
PDBTitle: crystal structure of group a streptococcus hupz
32c3u0iA_



not modelled 97.7 20
PDB header:unknown function
Chain: A: PDB Molecule:probable fad-binding, putative uncharacterized protein;
PDBTitle: crystal structure of a probable fad-binding, putative uncharacterized2 protein from brucella melitensis
33d1t9ma_



not modelled 97.7 13
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
34d2fhqa1



not modelled 97.6 23
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
35c3fkhB_



not modelled 97.6 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative pyridoxamine 5'-phosphate oxidase;
PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_601736.1) from corynebacterium glutamicum atcc 13032 kitasato at3 2.51 a resolution
36c4ybnB_



not modelled 97.5 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:flavin-nucleotide-binding protein;
PDBTitle: structure of the fad and heme binding protein msmeg_4975 from2 mycobacterium smegmatis
37d1ty9a_



not modelled 97.5 10
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
38c1nrgA_



not modelled 97.4 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyridoxine 5'-phosphate oxidase;
PDBTitle: structure and properties of recombinant human pyridoxine-5'-phosphate2 oxidase
39d1nrga_



not modelled 97.4 13
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
40c2q9kA_



not modelled 97.4 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative oxidoreductase (exig_1997) from2 exiguobacterium sibiricum 255-15 at 1.59 a resolution
41c2a2jA_



not modelled 97.4 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase;
PDBTitle: crystal structure of a putative pyridoxine 5'-phosphate oxidase2 (rv2607) from mycobacterium tuberculosis
42d2a2ja1



not modelled 97.3 15
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
43c4hmwB_



not modelled 97.3 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase;
PDBTitle: crystal structure of phzg from burkholderia lata 383
44c3cp3A_



not modelled 97.3 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved protein of unknown function dip18742 from corynebacterium diphtheriae
45c2htdB_



not modelled 97.2 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:predicted flavin-nucleotide-binding protein from cog3576
PDBTitle: crystal structure of a putative pyridoxamine 5'-phosphate oxidase2 (ldb0262) from lactobacillus delbrueckii subsp. at 1.60 a resolution
46d1xhna1



not modelled 97.2 18
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
47c3u34D_



not modelled 97.2 18
PDB header:protein binding
Chain: D: PDB Molecule:general stress protein;
PDBTitle: crystal structure of the general stress fmn/fad binding protein from2 the phytopathogen xanthomonas citri
48d1ci0a_



not modelled 97.1 14
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
49d1dnla_



not modelled 97.0 17
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
50c3dmbA_



not modelled 96.9 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative general stress protein 26 with a pnp-oxidase like
PDBTitle: crystal structure of a putative general stress family protein2 (xcc2264) from xanthomonas campestris pv. campestris at 2.30 a3 resolution
51c2qeaB_



not modelled 96.9 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative general stress protein 26;
PDBTitle: crystal structure of a putative general stress protein 26 (jann_0955)2 from jannaschia sp. ccs1 at 2.46 a resolution
52c6rk0A_



not modelled 96.0 17
PDB header:flavoprotein
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: structure of the flavocytochrome anf3 from azotobacter vinelandii
53d2vpaa1



not modelled 95.5 18
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
54d1flma_



not modelled 95.4 22
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
55c2i51B_



not modelled 92.5 14
PDB header:flavoprotein
Chain: B: PDB Molecule:uncharacterized conserved protein of cog5135;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related, fmn2 binding protein (npun_f5749) from nostoc punctiforme pcc 73102 at3 1.40 a resolution
56d2ptfa1



not modelled 86.4 11
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:MTH863-like
57c4n7rD_



not modelled 85.6 13
PDB header:oxidoreductase/protein binding
Chain: D: PDB Molecule:genomic dna, chromosome 3, p1 clone: mxl8;
PDBTitle: crystal structure of arabidopsis glutamyl-trna reductase in complex2 with its binding protein
58c2ou5B_



not modelled 84.8 18
PDB header:flavoprotein
Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-binding;
PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related fmn-2 binding protein (jann_0254) from jannaschia sp. ccs1 at 1.60 a3 resolution
59c2ptfB_



not modelled 84.5 11
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein mth_863;
PDBTitle: crystal structure of protein mth_863 from methanobacterium2 thermoautotrophicum bound to fmn
60c2ol5B_



not modelled 83.2 14
PDB header:transcription regulator
Chain: B: PDB Molecule:pai 2 protein;
PDBTitle: crystal structure of a protease synthase and sporulation negative2 regulatory protein pai 2 from bacillus stearothermophilus
61d2imla1



not modelled 33.9 18
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:MTH863-like
62c4wt5A_



not modelled 11.7 17
PDB header:chaperone
Chain: A: PDB Molecule:rubisco accumulation factor 1, isoform 2;
PDBTitle: the c-terminal domain of rubisco accumulation factor 1 from2 arabidopsis thaliana, crystal form ii
63d2nr4a1



not modelled 10.7 19
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:MTH863-like
64c4a2nB_



not modelled 10.2 27
PDB header:transferase
Chain: B: PDB Molecule:isoprenylcysteine carboxyl methyltransferase;
PDBTitle: crystal structure of ma-icmt
65c5v7pA_



not modelled 9.3 20
PDB header:transferase
Chain: A: PDB Molecule:protein-s-isoprenylcysteine o-methyltransferase;
PDBTitle: atomic structure of the eukaryotic intramembrane ras methyltransferase2 icmt (isoprenylcysteine carboxyl methyltransferase), in complex with3 a monobody
66c5jfzB_



not modelled 8.5 15
PDB header:transferase
Chain: B: PDB Molecule:uncharacterized protein yhfg;
PDBTitle: e. coli ecfict in complex with ecfica mutant e28g
67c5knwA_



not modelled 8.3 20
PDB header:rna binding protein
Chain: A: PDB Molecule:la-related protein 7;
PDBTitle: solution nmr structure of human larp7 xrrm2
68d1kb0a2



not modelled 8.2 33
Fold:8-bladed beta-propeller
Superfamily:Quinoprotein alcohol dehydrogenase-like
Family:Quinoprotein alcohol dehydrogenase-like
69c5jfzF_



not modelled 7.9 15
PDB header:transferase
Chain: F: PDB Molecule:uncharacterized protein yhfg;
PDBTitle: e. coli ecfict in complex with ecfica mutant e28g
70d1k3ra1



not modelled 7.7 11
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Hypothetical protein MTH1 (MT0001), insert domain
71d1v54m_



not modelled 7.6 40
Fold:Single transmembrane helix
Superfamily:Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
Family:Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
72d1owxa_



not modelled 7.6 5
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
73c4mqdB_



not modelled 7.5 20
PDB header:hydrolase inhibitor
Chain: B: PDB Molecule:dna-entry nuclease inhibitor;
PDBTitle: crystal structure of comj, inhibitor of the dna degrading activity of2 nuca, from bacillus subtilis
74c1ztnA_



not modelled 7.3 43
PDB header:transport protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily c member 4;
PDBTitle: inactivation gate of potassium channel raw3, nmr, 8 structures
75c3qrqA_



not modelled 7.0 18
PDB header:rna binding protein/rna
Chain: A: PDB Molecule:putative uncharacterized protein tthb192;
PDBTitle: structure of thermus thermophilus cse3 bound to an rna representing a2 pre-cleavage complex
76c3b5mD_



not modelled 6.8 16
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved uncharacterized protein from2 rhodopirellula baltica
77c6mk1V_



not modelled 6.6 67
PDB header:protein fibril
Chain: V: PDB Molecule:
PDBTitle: cryo-em of self-assembly peptide filament heat_r1
78c2levA_



not modelled 6.2 24
PDB header:transcription regulator/dna
Chain: A: PDB Molecule:ler;
PDBTitle: structure of the dna complex of the c-terminal domain of ler
79c2dhyA_



not modelled 6.0 20
PDB header:immune system
Chain: A: PDB Molecule:cue domain-containing protein 1;
PDBTitle: solution structure of the cue domain in the human cue2 domain containing protein 1 (cuedc1)
80c3jqoC_



not modelled 6.0 50
PDB header:transport protein
Chain: C: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
81d1zq1c1



not modelled 6.0 21
Fold:GatB/YqeY motif
Superfamily:GatB/YqeY motif
Family:GatB/GatE C-terminal domain-like
82c4u65A_



not modelled 5.9 18
PDB header:transferase/hydrolase
Chain: A: PDB Molecule:two component histidine kinase, ggdef domain protein/eal
PDBTitle: structure of the periplasmic output domain of the legionella2 pneumophila lapd ortholog cdgs9 in complex with pseudomonas3 fluorescens lapg
83d1c9ka_



not modelled 5.7 50
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
84c3jqoU_



not modelled 5.7 50
PDB header:transport protein
Chain: U: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
85c3zbiX_



not modelled 5.7 50
PDB header:cell adhesion
Chain: X: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
86c3zbiR_



not modelled 5.7 50
PDB header:cell adhesion
Chain: R: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
87c3zbig_



not modelled 5.7 50
PDB header:cell adhesion
Chain: G: PDB Molecule:traf protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
88c3zbiF_



not modelled 5.7 50
PDB header:cell adhesion
Chain: F: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
89c3zbiI_



not modelled 5.7 50
PDB header:cell adhesion
Chain: I: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
90c3zbiC_



not modelled 5.7 50
PDB header:cell adhesion
Chain: C: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
91c3zbia_



not modelled 5.7 50
PDB header:cell adhesion
Chain: A: PDB Molecule:traf protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
92c3zbiL_



not modelled 5.7 50
PDB header:cell adhesion
Chain: L: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
93c3zbiU_



not modelled 5.7 50
PDB header:cell adhesion
Chain: U: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
94c3zbij_



not modelled 5.7 50
PDB header:cell adhesion
Chain: J: PDB Molecule:traf protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
95c3zbim_



not modelled 5.7 50
PDB header:cell adhesion
Chain: M: PDB Molecule:traf protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
96c3zbiO_



not modelled 5.7 50
PDB header:cell adhesion
Chain: O: PDB Molecule:tran protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
97c3zbid_



not modelled 5.7 50
PDB header:cell adhesion
Chain: D: PDB Molecule:traf protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
98c3zbip_



not modelled 5.7 50
PDB header:cell adhesion
Chain: P: PDB Molecule:traf protein;
PDBTitle: fitting result in the o-layer of the subnanometer structure of the2 bacterial pkm101 type iv secretion system core complex digested with3 elastase
99c3jqoL_



not modelled 5.6 50
PDB header:transport protein
Chain: L: PDB Molecule:tran protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system

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