Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1566c_(-)_1773934_1774626
DateFri Aug 2 13:30:15 BST 2019
Unique Job IDf091e462cb6cfc80
SequenceMKRSMKSGSF ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:38.829 Y:43.593 Z:44.596
Model (left) based on template c2xivA_
Top template information
PDB header:structural protein
Chain: A: PDB Molecule:hypothetical invasion protein;
PDBTitle: structure of rv1477, hypothetical invasion protein of mycobacterium2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 66%
151 residues ( 66% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2xivA_
100.0 48
PDB header:structural protein
Chain: A: PDB Molecule:hypothetical invasion protein;
PDBTitle: structure of rv1477, hypothetical invasion protein of mycobacterium2 tuberculosis
2c3gt2A_
100.0 84
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the p60 domain from m. avium paratuberculosis2 antigen map1272c
3c3pbiA_
100.0 49
PDB header:hydrolase
Chain: A: PDB Molecule:invasion protein;
PDBTitle: structure of the peptidoglycan hydrolase ripb (rv1478) from2 mycobacterium tuberculosis at 1.6 resolution
4c3i86A_
100.0 53
PDB header:hydrolase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the p60 domain from m. avium subspecies2 paratuberculosis antigen map1204
5c6biqA_
100.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:clan ca, family c40, nlpc/p60 superfamily cysteine
PDBTitle: structure of nlpc2 from trichomonas vaginalis
6c4fdyA_
100.0 28
PDB header:hydrolase
Chain: A: PDB Molecule:similar to lipoprotein, nlp/p60 family;
PDBTitle: crystal structure of a similar to lipoprotein, nlp/p60 family2 (sav0400) from staphylococcus aureus subsp. aureus mu50 at 2.23 a3 resolution
7c2fg0B_
100.0 28
PDB header:hydrolase
Chain: B: PDB Molecule:cog0791: cell wall-associated hydrolases (invasion-
PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.793 a resolution
8d2evra2
100.0 29
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:NlpC/P60
9c3npfB_
100.0 29
PDB header:hydrolase
Chain: B: PDB Molecule:putative dipeptidyl-peptidase vi;
PDBTitle: crystal structure of a putative dipeptidyl-peptidase vi (bacova_00612)2 from bacteroides ovatus at 1.72 a resolution
10c4hpeA_
100.0 28
PDB header:hydrolase
Chain: A: PDB Molecule:putative cell wall hydrolase tn916-like,ctn1-orf17;
PDBTitle: crystal structure of a putative cell wall hydrolase (cd630_03720) from2 clostridium difficile 630 at 2.38 a resolution
11c3h41A_
100.0 33
PDB header:hydrolase
Chain: A: PDB Molecule:nlp/p60 family protein;
PDBTitle: crystal structure of a nlpc/p60 family protein (bce_2878) from2 bacillus cereus atcc 10987 at 1.79 a resolution
12c6b8cA_
100.0 34
PDB header:hydrolase
Chain: A: PDB Molecule:nlp/p60;
PDBTitle: crystal structure of nlpc/p60 domain of peptidoglycan hydrolase saga
13c2k1gA_
100.0 25
PDB header:lipoprotein
Chain: A: PDB Molecule:lipoprotein spr;
PDBTitle: solution nmr structure of lipoprotein spr from escherichia coli k12.2 northeast structural genomics target er541-37-162
14c4xcmB_
99.9 28
PDB header:hydrolase
Chain: B: PDB Molecule:cell wall-binding endopeptidase-related protein;
PDBTitle: crystal structure of the putative nlpc/p60 d,l endopeptidase from t.2 thermophilus
15c3m1uB_
99.8 27
PDB header:hydrolase
Chain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase;
PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution
16c2p1gA_
99.1 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative xylanase;
PDBTitle: crystal structure of a putative xylanase from bacteroides fragilis
17c2kytA_
98.2 24
PDB header:hydrolase
Chain: A: PDB Molecule:group xvi phospholipase a2;
PDBTitle: solution structure of the h-rev107 n-terminal domain
18c2lktA_
98.1 33
PDB header:hydrolase
Chain: A: PDB Molecule:retinoic acid receptor responder protein 3;
PDBTitle: solution structure of n-terminal domain of human tig3 in 2 m urea
19c3kw0D_
97.5 21
PDB header:hydrolase
Chain: D: PDB Molecule:cysteine peptidase;
PDBTitle: crystal structure of cysteine peptidase (np_982244.1) from bacillus2 cereus atcc 10987 at 2.50 a resolution
20d2if6a1
96.2 11
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:YiiX-like
21c4hzbA_
not modelled 95.8 22
PDB header:hydrolase
Chain: A: PDB Molecule:putative cytoplasmic protein;
PDBTitle: crystal structure of the type vi semet effector-immunity complex tae3-2 tai3 from ralstonia pickettii
22c2lrjA_
not modelled 93.2 32
PDB header:biosynthetic protein
Chain: A: PDB Molecule:staphyloxanthin biosynthesis protein, putative;
PDBTitle: nmr solution structure of staphyloxanthin biosynthesis protein
23c4eyzB_
not modelled 93.0 42
PDB header:hydrolase
Chain: B: PDB Molecule:cellulosome-related protein module from ruminococcus
PDBTitle: crystal structure of an uncommon cellulosome-related protein module2 from ruminococcus flavefaciens that resembles papain-like cysteine3 peptidases
24c4pa5A_
not modelled 92.3 18
PDB header:transferase
Chain: A: PDB Molecule:protein-glutamine gamma-glutamyltransferase;
PDBTitle: tgl - a bacterial spore coat transglutaminase - cystamine complex
25c5udmA_
not modelled 92.2 17
PDB header:hydrolase
Chain: A: PDB Molecule:phage-associated cell wall hydrolase;
PDBTitle: phage-associated cell wall hydrolase plypy from streptococcus2 pyogenes, space group p6522
26c2k3aA_
not modelled 92.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:chap domain protein;
PDBTitle: nmr solution structure of staphylococcus saprophyticus chap2 (cysteine, histidine-dependent amidohydrolases/peptidases)3 domain protein. northeast structural genomics consortium4 target syr11
27d2im9a1
not modelled 90.1 15
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Lpg0564-like
28c2im9A_
not modelled 90.1 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of protein lpg0564 from legionella pneumophila str.2 philadelphia 1, pfam duf1460
29c4h4jA_
not modelled 89.7 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a n-acetylmuramoyl-l-alanine amidase2 (bacuni_02947) from bacteroides uniformis atcc 8492 at 1.15 a3 resolution
30c4f4mA_
not modelled 84.7 42
PDB header:hydrolase regulator
Chain: A: PDB Molecule:papain peptidoglycan amidase effector tse1;
PDBTitle: structure of the type vi peptidoglycan amidase effector tse1 (c30a)2 from pseudomonas aeruginosa
31c4f0wA_
not modelled 83.8 42
PDB header:hydrolase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of type effector tse1 c30a mutant from pseudomonas2 aeruginousa
32c2q1dX_
not modelled 81.5 20
PDB header:lyase
Chain: X: PDB Molecule:2-keto-3-deoxy-d-arabinonate dehydratase;
PDBTitle: 2-keto-3-deoxy-d-arabinonate dehydratase complexed with magnesium and2 2,5-dioxopentanoate
33c4yxbA_
not modelled 76.7 16
PDB header:protein transport
Chain: A: PDB Molecule:flagellar motor switch protein flim,flagellar motor switch
PDBTitle: flim(spoa)::flin fusion protein
34d1nkqa_
not modelled 74.5 37
Fold:FAH
Superfamily:FAH
Family:FAH
35d2io8a2
not modelled 74.0 33
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:CHAP domain
36d1o9ya_
not modelled 74.0 16
Fold:Surface presentation of antigens (SPOA)
Superfamily:Surface presentation of antigens (SPOA)
Family:Surface presentation of antigens (SPOA)
37c4cgkA_
not modelled 73.3 11
PDB header:cell cycle
Chain: A: PDB Molecule:secreted 45 kda protein;
PDBTitle: crystal structure of the essential protein pcsb from streptococcus2 pneumoniae
38c3eopB_
not modelled 73.1 9
PDB header:unknown function
Chain: B: PDB Molecule:thymocyte nuclear protein 1;
PDBTitle: crystal structure of the duf55 domain of human thymocyte nuclear2 protein 1
39c4nubA_
not modelled 72.0 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:50s ribosomal protein l16 arginine hydroxylase;
PDBTitle: crystal structure of escherichia coli ribosomal oxygenase ycfd
40c4dbhA_
not modelled 71.5 22
PDB header:isomerase
Chain: A: PDB Molecule:2-hydroxyhepta-2,4-diene-1,7-dioate isomerase;
PDBTitle: crystal structure of cg1458 with inhibitor
41d1gtta1
not modelled 71.4 33
Fold:FAH
Superfamily:FAH
Family:FAH
42d1sawa_
not modelled 71.2 26
Fold:FAH
Superfamily:FAH
Family:FAH
43c3r6oA_
not modelled 71.0 26
PDB header:isomerase
Chain: A: PDB Molecule:2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase;
PDBTitle: crystal structure of a probable 2-hydroxyhepta-2,4-diene-1, 7-2 dioateisomerase from mycobacterium abscessus
44c3s52A_
not modelled 70.9 26
PDB header:hydrolase
Chain: A: PDB Molecule:putative fumarylacetoacetate hydrolase family protein;
PDBTitle: crystal structure of a putative fumarylacetoacetate hydrolase family2 protein from yersinia pestis co92
45d2gbsa1
not modelled 70.8 41
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:Atu2648/PH1033-like
46c4maqB_
not modelled 69.8 44
PDB header:hydrolase
Chain: B: PDB Molecule:putative fumarylpyruvate hydrolase;
PDBTitle: crystal structure of a putative fumarylpyruvate hydrolase from2 burkholderia cenocepacia
47c4olkB_
not modelled 69.3 13
PDB header:hydrolase
Chain: B: PDB Molecule:endolysin;
PDBTitle: the chap domain of lysgh15
48d2ar1a1
not modelled 68.3 13
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:Atu2648/PH1033-like
49c1i7oC_
not modelled 68.1 30
PDB header:isomerase, lyase
Chain: C: PDB Molecule:4-hydroxyphenylacetate degradation bifunctional
PDBTitle: crystal structure of hpce
50c5xrwD_
not modelled 67.7 14
PDB header:motor protein
Chain: D: PDB Molecule:fliy;
PDBTitle: crystal structure of flagellar motor switch complex from h. pylori
51c3qdfA_
not modelled 67.6 41
PDB header:isomerase
Chain: A: PDB Molecule:2-hydroxyhepta-2,4-diene-1,7-dioate isomerase;
PDBTitle: crystal structure of 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase2 from mycobacterium marinum
52d1zcea1
not modelled 67.6 32
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:Atu2648/PH1033-like
53d2eyqa1
not modelled 67.1 22
Fold:SH3-like barrel
Superfamily:CarD-like
Family:CarD-like
54c6jvwA_
not modelled 66.4 42
PDB header:hydrolase
Chain: A: PDB Molecule:maleylpyruvate hydrolase;
PDBTitle: crystal structure of maleylpyruvate hydrolase from sphingobium sp.2 syk-6 in complex with manganese (ii) ion and pyruvate
55c4rgkA_
not modelled 65.0 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of putative phytanoyl-coa dioxygenase family protein2 ybiu from yersinia pestis
56c2dbiA_
not modelled 64.9 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ybiu;
PDBTitle: crystal structure of a hypothetical protein jw0805 from2 escherichia coli
57d1o6aa_
not modelled 64.9 19
Fold:Surface presentation of antigens (SPOA)
Superfamily:Surface presentation of antigens (SPOA)
Family:Surface presentation of antigens (SPOA)
58c3uepB_
not modelled 64.8 24
PDB header:protein transport
Chain: B: PDB Molecule:yscq-c, type iii secretion protein;
PDBTitle: crystal structure of yscq-c from yersinia pseudotuberculosis
59d2csga1
not modelled 64.7 18
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:YbiU-like
60d1gtta2
not modelled 64.7 33
Fold:FAH
Superfamily:FAH
Family:FAH
61c4cswA_
not modelled 64.2 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:cupin 4 family protein;
PDBTitle: rhodothermus marinus ycfd-like ribosomal protein l16 arginyl2 hydroxylase
62c4lt5A_
not modelled 63.8 23
PDB header:oxidoreductase/dna
Chain: A: PDB Molecule:naegleria tet-like dioxygenase;
PDBTitle: structure of a naegleria tet-like dioxygenase in complex with 5-2 methylcytosine dna
63d1nr9a_
not modelled 63.0 33
Fold:FAH
Superfamily:FAH
Family:FAH
64d2g2xa1
not modelled 62.7 13
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:Atu2648/PH1033-like
65d2evea1
not modelled 62.4 13
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:Atu2648/PH1033-like
66d1hyoa2
not modelled 62.2 39
Fold:FAH
Superfamily:FAH
Family:FAH
67c2nnzA_
not modelled 60.3 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: solution structure of the hypothetical protein af2241 from2 archaeoglobus fulgidus
68c4tt9A_
not modelled 59.9 14
PDB header:protein transport
Chain: A: PDB Molecule:surface presentation of antigens protein spao;
PDBTitle: structure of the c-terminal spoa domain of shigella flexneri spa33
69c3l53F_
not modelled 59.6 41
PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:putative fumarylacetoacetate isomerase/hydrolase;
PDBTitle: crystal structure of a putative fumarylacetoacetate2 isomerase/hydrolase from oleispira antarctica
70c5xrwA_
not modelled 58.6 23
PDB header:motor protein
Chain: A: PDB Molecule:flin;
PDBTitle: crystal structure of flagellar motor switch complex from h. pylori
71c3kopB_
not modelled 57.5 23
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of protein with a cyclophilin-like fold2 (yp_831253.1) from arthrobacter sp. fb24 at 1.90 a resolution
72c1hyoB_
not modelled 57.0 30
PDB header:hydrolase
Chain: B: PDB Molecule:fumarylacetoacetate hydrolase;
PDBTitle: crystal structure of fumarylacetoacetate hydrolase2 complexed with 4-(hydroxymethylphosphinoyl)-3-oxo-butanoic3 acid
73d2ba0a2
not modelled 56.8 24
Fold:Barrel-sandwich hybrid
Superfamily:Ribosomal L27 protein-like
Family:ECR1 N-terminal domain-like
74c2dfuB_
not modelled 56.6 30
PDB header:isomerase
Chain: B: PDB Molecule:probable 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase;
PDBTitle: crystal structure of the 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase2 from thermus thermophilus hb8
75d1vrba1
not modelled 56.2 14
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Asparaginyl hydroxylase-like
76c6iymB_
not modelled 56.0 25
PDB header:hydrolase
Chain: B: PDB Molecule:5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase;
PDBTitle: fumarylacetoacetate hydrolase (eafah) from psychrophilic2 exiguobacterium antarcticum
77d1zx8a1
not modelled 56.0 20
Fold:Cyclophilin-like
Superfamily:Cyclophilin-like
Family:TM1367-like
78c5t1qB_
not modelled 55.3 21
PDB header:hydrolase
Chain: B: PDB Molecule:n-acetylmuramoyl-l-alanine amidase domain-containing
PDBTitle: 2.15 angstrom crystal structure of n-acetylmuramoyl-l-alanine amidase2 from staphylococcus aureus.
79c4qkuC_
not modelled 53.6 26
PDB header:hydrolase
Chain: C: PDB Molecule:hydrolase;
PDBTitle: crystal structure of a putative hydrolase from burkholderia2 cenocepacia
80c4yxaB_
not modelled 52.7 19
PDB header:protein transport
Chain: B: PDB Molecule:surface presentation of antigens protein spao;
PDBTitle: complex of spao(spoa1,2 semet) and orgb(apar)::t4lysozyme fusion2 protein
81c3lzkC_
not modelled 51.1 32
PDB header:hydrolase
Chain: C: PDB Molecule:fumarylacetoacetate hydrolase family protein;
PDBTitle: the crystal structure of a probably aromatic amino acid2 degradation protein from sinorhizobium meliloti 1021
82c3uyjA_
not modelled 50.3 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:lysine-specific demethylase 8;
PDBTitle: crystal structure of jmjd5 catalytic core domain in complex with2 nickle and alpha-kg
83c1wzoC_
not modelled 49.7 22
PDB header:isomerase
Chain: C: PDB Molecule:hpce;
PDBTitle: crystal structure of the hpce from thermus thermophilus hb8
84c2xxzA_
not modelled 49.6 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:lysine-specific demethylase 6b;
PDBTitle: crystal structure of the human jmjd3 jumonji domain
85c4diqA_
not modelled 49.5 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:lysine-specific demethylase no66;
PDBTitle: crystal structure of human no66
86c2ioaA_
not modelled 48.6 33
PDB header:ligase, hydrolase
Chain: A: PDB Molecule:bifunctional glutathionylspermidine
PDBTitle: e. coli bifunctional glutathionylspermidine2 synthetase/amidase incomplex with mg2+ and adp and3 phosphinate inhibitor
87c5eqnA_
not modelled 48.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:frbj;
PDBTitle: structure of phosphonate hydroxylase
88c4l5gA_
not modelled 47.0 35
PDB header:transcription
Chain: A: PDB Molecule:card;
PDBTitle: crystal structure of thermus thermophilus card
89c3al6A_
not modelled 45.0 19
PDB header:unknown function
Chain: A: PDB Molecule:jmjc domain-containing protein c2orf60;
PDBTitle: crystal structure of human tyw5
90c2lqkA_
not modelled 44.6 32
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator;
PDBTitle: nmr solution structure of the n-terminal domain of the cdnl protein2 from thermus thermophilus
91c2wbqA_
not modelled 44.4 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:l-arginine beta-hydroxylase;
PDBTitle: crystal structure of vioc in complex with (2s,3s)-2 hydroxyarginine
92d1wpga1
not modelled 44.2 16
Fold:Double-stranded beta-helix
Superfamily:Calcium ATPase, transduction domain A
Family:Calcium ATPase, transduction domain A
93c6gmaA_
not modelled 43.8 29
PDB header:protein binding
Chain: A: PDB Molecule:rb1-inducible coiled-coil protein 1;
PDBTitle: crystal structure of the fip200 c-terminal region
94c6exhA_
not modelled 42.3 31
PDB header:oxidoreductase
Chain: A: PDB Molecule:l-lysine 4-hydroxylase;
PDBTitle: crystal structure of the complex fe(ii)/alpha-ketoglutarate dependent2 dioxygenase kdo5 with fe(ii)/succinate/(4r)-4-hydroxy-l-lysine
95c2vpmB_
not modelled 41.3 14
PDB header:ligase
Chain: B: PDB Molecule:trypanothione synthetase;
PDBTitle: trypanothione synthetase
96c4ne0B_
not modelled 41.3 25
PDB header:hydrolase
Chain: B: PDB Molecule:l-arginine beta-hydroxylase;
PDBTitle: crystal structure of non-heme iron oxygenase orfp d157a mutant in2 complex with (3s)-hydroxy-l-arg
97d2phla2
not modelled 40.1 11
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:Germin/Seed storage 7S protein
98d1j3pa_
not modelled 39.4 18
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:Glucose-6-phosphate isomerase, GPI
99c3nnlB_
not modelled 38.9 19
PDB header:biosynthetic protein
Chain: B: PDB Molecule:cura;
PDBTitle: halogenase domain from cura module (crystal form iii)
100c3l2hD_
not modelled 38.6 25
PDB header:isomerase
Chain: D: PDB Molecule:putative sugar phosphate isomerase;
PDBTitle: crystal structure of putative sugar phosphate isomerase (afe_0303)2 from acidithiobacillus ferrooxidans atcc 23270 at 1.85 a resolution
101c6dawA_
not modelled 38.3 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:non-heme iron hydroxylase;
PDBTitle: x-ray crystal structure of napi l-arginine desaturase bound to fe(ii),2 l-arginine, and acetate
102c6ar2B_
not modelled 38.1 24
PDB header:membrane protein
Chain: B: PDB Molecule:sarcolemmal membrane-associated protein;
PDBTitle: structure of human slmap fha domain in complex with pmst2
103c3ibmB_
not modelled 37.9 11
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein;
PDBTitle: crystal structure of cupin 2 domain-containing protein hhal_0468 from2 halorhodospira halophila
104c4kbmB_
not modelled 37.8 32
PDB header:transferase/transcription
Chain: B: PDB Molecule:rna polymerase-binding transcription factor card;
PDBTitle: structure of the mtb card/rnap beta subunit b1-b2 domains complex
105d1jr7a_
not modelled 37.4 6
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Gab protein (hypothetical protein YgaT)
106c2eyqA_
not modelled 36.8 22
PDB header:hydrolase
Chain: A: PDB Molecule:transcription-repair coupling factor;
PDBTitle: crystal structure of escherichia coli transcription-repair2 coupling factor
107d2jfga2
not modelled 36.2 17
Fold:MurD-like peptide ligases, peptide-binding domain
Superfamily:MurD-like peptide ligases, peptide-binding domain
Family:MurCDEF C-terminal domain
108c6f6jC_
not modelled 35.9 6
PDB header:oxidoreductase
Chain: C: PDB Molecule:l-lysine 3-hydroxylase;
PDBTitle: crystal structure of the fe(ii)/alpha-ketoglutarate dependent2 dioxygenase kdo1 with fe(ii)/succinate/(3s)-3-hydroxy-l-lysine
109c2og5A_
not modelled 35.8 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxygenase;
PDBTitle: crystal structure of asparagine oxygenase (asno)
110c4qglA_
not modelled 35.3 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:acireductone dioxygenase;
PDBTitle: acireductone dioxygenase from bacillus anthracis with three cadmium2 ions
111d1ds1a_
not modelled 35.1 25
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Clavaminate synthase
112c2xdvA_
not modelled 34.6 30
PDB header:nuclear protein
Chain: A: PDB Molecule:myc-induced nuclear antigen;
PDBTitle: crystal structure of the catalytic domain of flj14393
113c4ne0A_
not modelled 34.5 24
PDB header:hydrolase
Chain: A: PDB Molecule:l-arginine beta-hydroxylase;
PDBTitle: crystal structure of non-heme iron oxygenase orfp d157a mutant in2 complex with (3s)-hydroxy-l-arg
114c2lt1A_
not modelled 34.3 30
PDB header:transcription
Chain: A: PDB Molecule:card protein;
PDBTitle: solution nmr structure of the 72-residue n-terminal domain of2 myxococcus xanthus card
115d2z1ea2
not modelled 33.2 31
Fold:PurM C-terminal domain-like
Superfamily:PurM C-terminal domain-like
Family:PurM C-terminal domain-like
116d1c0aa2
not modelled 32.8 50
Fold:DCoH-like
Superfamily:GAD domain-like
Family:GAD domain
117d2pyta1
not modelled 32.8 16
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:EutQ-like
118c4xbzB_
not modelled 32.5 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:evdo1;
PDBTitle: crystal structure of evdo1 from micromonospora carbonacea var.2 aurantiaca
119c3al6C_
not modelled 32.0 24
PDB header:unknown function
Chain: C: PDB Molecule:jmjc domain-containing protein c2orf60;
PDBTitle: crystal structure of human tyw5
120d1a3xa1
not modelled 31.3 16
Fold:PK beta-barrel domain-like
Superfamily:PK beta-barrel domain-like
Family:Pyruvate kinase beta-barrel domain

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite