Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1580c_(-)_1783627_1783899
DateFri Aug 2 13:30:17 BST 2019
Unique Job ID829278911ae716b2
SequenceMAETPDHAEL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:23.635 Y:25.519 Z:27.594
Model (left) based on template c2js3B_
Top template information
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: nmr structure of protein q6n9a4_rhopa. northeast structural genomics2 consortium target rpt8
Confidence and coverage
Confidence: 64.7% Coverage: 34%
31 residues ( 34% of your sequence) have been modelled with 64.7% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2js3B_



64.7 52
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: nmr structure of protein q6n9a4_rhopa. northeast structural genomics2 consortium target rpt8
2c2jr7A_



31.0 33
PDB header:metal binding protein
Chain: A: PDB Molecule:dph3 homolog;
PDBTitle: solution structure of human desr1
3d2a1ka1



26.1 33
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Phage ssDNA-binding proteins
4c6f0fB_



23.4 73
PDB header:chaperone
Chain: B: PDB Molecule:ip2_s;
PDBTitle: crystal structure asf1-ip2_s
5c2hdeA_



22.0 35
PDB header:transcription
Chain: A: PDB Molecule:histone deacetylase complex subunit sap18;
PDBTitle: solution structure of human sap18
6d1yfua1



21.2 32
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:3-hydroxyanthranilic acid dioxygenase-like
7c2i34B_



18.8 37
PDB header:hydrolase
Chain: B: PDB Molecule:acid phosphatase;
PDBTitle: the crystal structure of class c acid phosphatase from bacillus2 anthracis with tungstate bound
8d1zvfa1



18.6 32
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:3-hydroxyanthranilic acid dioxygenase-like
9d1ibia1



12.2 75
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
10c3et4A_



12.2 36
PDB header:hydrolase
Chain: A: PDB Molecule:outer membrane protein p4, nadp phosphatase;
PDBTitle: structure of recombinant haemophilus influenzae e(p4) acid phosphatase
11c4s37F_



12.1 50
PDB header:metal binding protein
Chain: F: PDB Molecule:phage baseplate protein;
PDBTitle: crystal structure of r2 pyocin membrane-piercing spike
12d1gpca_



12.1 29
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Phage ssDNA-binding proteins
13c3pctA_



11.0 41
PDB header:hydrolase
Chain: A: PDB Molecule:class c acid phosphatase;
PDBTitle: structure of the class c acid phosphatase from pasteurella multocida
14c2i5oA_



10.9 56
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase eta;
PDBTitle: solution structure of the ubiquitin-binding zinc finger2 (ubz) domain of the human dna y-polymerase eta
15c5y0tD_



10.6 34
PDB header:ligase
Chain: D: PDB Molecule:thermotoga maritima tmcal;
PDBTitle: crystal structure of thermotoga maritima tmcal bound with alpha-thio2 atp(form ii)
16d1ctla1



9.3 75
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
17d1kpta_



8.3 19
Fold:Yeast killer toxins
Superfamily:Yeast killer toxins
Family:Virally encoded KP4 toxin
18c4pl8H_



8.2 70
PDB header:contractile protein/structural protein
Chain: H: PDB Molecule:thymosin beta-4,protein cordon-bleu,thymosin beta-4;
PDBTitle: structure of rabbit skeletal muscle actin in complex with a hybrid2 peptide comprising thymosin beta4 and the lysine-rich region of3 cordon-bleu
19d2ciwa1



8.1 42
Fold:EF Hand-like
Superfamily:Cloroperoxidase
Family:Cloroperoxidase
20c2c9aA_



8.0 23
PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase mu;
PDBTitle: crystal structure of the mam-ig module of receptor protein2 tyrosine phosphatase mu
21c5y0nB_



not modelled 7.4 45
PDB header:ligase
Chain: B: PDB Molecule:upf0348 protein b4417_3650;
PDBTitle: crystal structure of bacillus subtilis tmcal bound with atp (semet2 derivative)
22c5i4rA_



not modelled 7.3 35
PDB header:toxin/antitoxin
Chain: A: PDB Molecule:contact-dependent inhibitor a;
PDBTitle: contact-dependent inhibition system from escherichia coli nc101 -2 ternary cdia/cdii/ef-tu complex (trypsin-modified)
23d1eyla_



not modelled 6.9 27
Fold:beta-Trefoil
Superfamily:STI-like
Family:Kunitz (STI) inhibitors
24c4ii0A_



not modelled 6.7 28
PDB header:hydrolase inhibitor
Chain: A: PDB Molecule:cratabl;
PDBTitle: crystal structure of cratabl, a trypsin inhibitor from crataeva tapia
25c1r8oA_



not modelled 6.5 31
PDB header:hydrolase inhibitor
Chain: A: PDB Molecule:kunitz trypsin inhibitor;
PDBTitle: crystal structure of an unusual kunitz-type trypsin inhibitor from2 copaifera langsdorffii seeds
26d1mhna_



not modelled 6.4 19
Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
27c3ts3D_



not modelled 6.4 42
PDB header:viral protein
Chain: D: PDB Molecule:capsid polyprotein;
PDBTitle: crystal structure of the projection domain of the turkey astrovirus2 capsid protein at 1.5 angstrom resolution
28d4fiva_



not modelled 6.2 29
Fold:Acid proteases
Superfamily:Acid proteases
Family:Retroviral protease (retropepsin)
29d1j8ua_



not modelled 5.9 40
Fold:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
Superfamily:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
Family:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
30d1mlwa_



not modelled 5.9 40
Fold:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
Superfamily:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
Family:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
31d1d4va1



not modelled 5.8 27
Fold:TNF receptor-like
Superfamily:TNF receptor-like
Family:TNF receptor-like
32d1phza2



not modelled 5.8 40
Fold:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
Superfamily:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
Family:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
33c1ee8A_



not modelled 5.7 32
PDB header:dna binding protein
Chain: A: PDB Molecule:mutm (fpg) protein;
PDBTitle: crystal structure of mutm (fpg) protein from thermus thermophilus hb8
34c2m6oA_



not modelled 5.6 67
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the actinobacterial transcription factor rbpa binds to the principal2 sigma subunit of rna polymerase
35d1tiea_



not modelled 5.4 30
Fold:beta-Trefoil
Superfamily:STI-like
Family:Kunitz (STI) inhibitors
36c3e2tA_



not modelled 5.4 45
PDB header:oxidoreductase
Chain: A: PDB Molecule:tryptophan 5-hydroxylase 1;
PDBTitle: the catalytic domain of chicken tryptophan hydroxylase 12 with bound tryptophan
37c3gycB_



not modelled 5.3 56
PDB header:hydrolase
Chain: B: PDB Molecule:putative glycoside hydrolase;
PDBTitle: crystal structure of putative glycoside hydrolase (yp_001304622.1)2 from parabacteroides distasonis atcc 8503 at 1.85 a resolution
38c1hvwA_



not modelled 5.3 67
PDB header:toxin
Chain: A: PDB Molecule:omega-atracotoxin-hv1a;
PDBTitle: hairpinless mutant of omega-atracotoxin-hv1a
39d1hvwa_



not modelled 5.3 67
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Spider toxins
40c2go2A_



not modelled 5.3 25
PDB header:protein binding
Chain: A: PDB Molecule:kunitz-type serine protease inhibitor bbki;
PDBTitle: crystal structure of bbki, a kunitz-type kallikrein inhibitor
41c5w1sM_



not modelled 5.3 24
PDB header:transferase
Chain: M: PDB Molecule:protein trar;
PDBTitle: x-ray crystal structure of escherichia coli rna polymerase and trar2 complex
42c2qn4B_



not modelled 5.1 31
PDB header:hydrolase inhibitor
Chain: B: PDB Molecule:alpha-amylase/subtilisin inhibitor;
PDBTitle: structure and function study of rice bifunctional alpha-2 amylase/subtilisin inhibitor from oryza sativa

Binding site prediction 

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