Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1582c_(-)_1784504_1785919
DateFri Aug 2 13:30:17 BST 2019
Unique Job ID9e6be58d1a58882b
SequenceMADIPYGTDY ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:39.892 Y:47.689 Z:53.814
Model (left) based on template d1u0ja_
Top template information
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
Confidence and coverage
Confidence: 99.8% Coverage: 38%
180 residues ( 38% of your sequence) have been modelled with 99.8% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
294 residues ( 62%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1u0ja_
99.8 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
2c2gxaA_
99.6 14
PDB header:replication/dna
Chain: A: PDB Molecule:replication protein e1;
PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 with ssdna and mgadp
3c2v9pH_
99.5 18
PDB header:hydrolase
Chain: H: PDB Molecule:replication protein e1;
PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 dna-free form
4d1tuea_
99.3 17
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
5d1svma_
98.6 11
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
6c4gdfF_
98.4 11
PDB header:hydrolase/dna
Chain: F: PDB Molecule:large t antigen;
PDBTitle: a crystal structure of sv40 large t antigen
7d1dp7p_
98.4 10
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:P4 origin-binding domain-like
8c4ypnA_
98.3 15
PDB header:hydrolase
Chain: A: PDB Molecule:lon protease;
PDBTitle: crystal structure of a lona fragment containing the 3-helix bundle and2 the aaa-alpha/beta domain
9d1ixsb2
98.0 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
10c2qz4A_
98.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:paraplegin;
PDBTitle: human paraplegin, aaa domain in complex with adp
11c3u5zM_
98.0 10
PDB header:dna binding protein/dna
Chain: M: PDB Molecule:dna polymerase accessory protein 44;
PDBTitle: structure of t4 bacteriophage clamp loader bound to the t4 clamp,2 primer-template dna, and atp analog
12c3pvsA_
98.0 19
PDB header:recombination
Chain: A: PDB Molecule:replication-associated recombination protein a;
PDBTitle: structure and biochemical activities of escherichia coli mgsa
13c3nbxX_
97.9 14
PDB header:hydrolase
Chain: X: PDB Molecule:atpase rava;
PDBTitle: crystal structure of e. coli rava (regulatory atpase variant a) in2 complex with adp
14c3vfdA_
97.9 12
PDB header:hydrolase
Chain: A: PDB Molecule:spastin;
PDBTitle: human spastin aaa domain
15c6blbA_
97.9 11
PDB header:hydrolase
Chain: A: PDB Molecule:holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 1.88 angstrom resolution crystal structure holliday junction atp-2 dependent dna helicase (ruvb) from pseudomonas aeruginosa in complex3 with adp
16c5c3cB_
97.9 16
PDB header:protein binding
Chain: B: PDB Molecule:cbbq/nirq/norq domain protein;
PDBTitle: structural characterization of a newly identified component of alpha-2 carboxysomes: the aaa+ domain protein cso-cbbq
17c3b9pA_
97.8 12
PDB header:hydrolase
Chain: A: PDB Molecule:cg5977-pa, isoform a;
PDBTitle: spastin
18c1sxjA_
97.8 13
PDB header:replication
Chain: A: PDB Molecule:activator 1 95 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
19c5grbF_
97.8 14
PDB header:hydrolase/inhibitor
Chain: F: PDB Molecule:ev71 2c atpase;
PDBTitle: crystal structure of 2c helicase from enterovirus 71 (ev71) bound with2 atpgammas
20c6nyyC_
97.7 19
PDB header:translocase
Chain: C: PDB Molecule:afg3-like protein 2;
PDBTitle: human m-aaa protease afg3l2, substrate-bound
21d1ofha_
not modelled 97.7 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
22c1r6bX_
not modelled 97.7 16
PDB header:hydrolase
Chain: X: PDB Molecule:clpa protein;
PDBTitle: high resolution crystal structure of clpa
23c5kzfJ_
not modelled 97.7 16
PDB header:hydrolase
Chain: J: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of near full-length hexameric mycobacterium2 tuberculosis proteasomal atpase mpa in apo form
24d1sxja2
not modelled 97.7 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
25d1ka8a_
not modelled 97.7 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:P4 origin-binding domain-like
26c4b4tM_
not modelled 97.7 13
PDB header:hydrolase
Chain: M: PDB Molecule:26s protease regulatory subunit 6a;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
27c4l16A_
not modelled 97.7 13
PDB header:hydrolase
Chain: A: PDB Molecule:fidgetin-like protein 1;
PDBTitle: crystal structure of figl-1 aaa domain in complex with adp
28c3pxiB_
not modelled 97.6 14
PDB header:protein binding
Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb;
PDBTitle: structure of meca108:clpc
29c3d8bB_
not modelled 97.6 16
PDB header:hydrolase
Chain: B: PDB Molecule:fidgetin-like protein 1;
PDBTitle: crystal structure of human fidgetin-like protein 1 in complex with adp
30c2chgB_
not modelled 97.6 15
PDB header:dna-binding protein
Chain: B: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c domains 1 and 2
31c4lcbA_
not modelled 97.6 14
PDB header:protein transport
Chain: A: PDB Molecule:cell division protein cdvc, vps4;
PDBTitle: structure of vps4 homolog from acidianus hospitalis
32d2ce7a2
not modelled 97.6 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
33d1r6bx3
not modelled 97.6 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
34c5g4gF_
not modelled 97.6 17
PDB header:hydrolase
Chain: F: PDB Molecule:vcp-like atpase;
PDBTitle: structure of the atpgs-bound vat complex
35c3eihB_
not modelled 97.6 13
PDB header:protein transport
Chain: B: PDB Molecule:vacuolar protein sorting-associated protein 4;
PDBTitle: crystal structure of s.cerevisiae vps4 in the presence of atpgammas
36c6azyA_
not modelled 97.6 14
PDB header:chaperone
Chain: A: PDB Molecule:heat shock protein hsp104;
PDBTitle: crystal structure of hsp104 r328m/r757m mutant from calcarisporiella2 thermophila
37c5j1sA_
not modelled 97.6 12
PDB header:hydrolase
Chain: A: PDB Molecule:torsin-1a;
PDBTitle: torsina-lull1 complex, h. sapiens, bound to vhh-bs2
38c2ce7B_
not modelled 97.6 10
PDB header:cell division protein
Chain: B: PDB Molecule:cell division protein ftsh;
PDBTitle: edta treated
39c6az0A_
not modelled 97.5 12
PDB header:hydrolase
Chain: A: PDB Molecule:mitochondrial inner membrane i-aaa protease supercomplex
PDBTitle: mitochondrial atpase protease yme1
40c5h7i7_
not modelled 97.5 17
PDB header:hydrolase
Chain: 7: PDB Molecule:dna replication licensing factor mcm7;
PDBTitle: cryo-em structure of the cdt1-mcm2-7 complex in amppnp state
41d1iqpa2
not modelled 97.5 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
42c1qvrB_
not modelled 97.5 14
PDB header:chaperone
Chain: B: PDB Molecule:clpb protein;
PDBTitle: crystal structure analysis of clpb
43c6nyyA_
not modelled 97.5 17
PDB header:translocase
Chain: A: PDB Molecule:afg3-like protein 2;
PDBTitle: human m-aaa protease afg3l2, substrate-bound
44c5z3qD_
not modelled 97.5 14
PDB header:viral protein
Chain: D: PDB Molecule:pv-2c;
PDBTitle: crystal structure of a soluble fragment of poliovirus 2c atpase (2.552 angstrom)
45c2r65A_
not modelled 97.5 14
PDB header:hydrolase
Chain: A: PDB Molecule:cell division protease ftsh homolog;
PDBTitle: crystal structure of helicobacter pylori atp dependent protease, ftsh2 adp complex
46d1e32a2
not modelled 97.5 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
47c3pfiB_
not modelled 97.5 13
PDB header:hydrolase
Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate
48d1in4a2
not modelled 97.4 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
49c5dgkA_
not modelled 97.4 9
PDB header:replication
Chain: A: PDB Molecule:active helicase;
PDBTitle: sccmec type iv cch - active helicase
50d1qvra3
not modelled 97.4 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
51c2p65A_
not modelled 97.4 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pf08_0063;
PDBTitle: crystal structure of the first nucleotide binding domain of2 chaperone clpb1, putative, (pv089580) from plasmodium vivax
52c5d4wB_
not modelled 97.4 17
PDB header:chaperone
Chain: B: PDB Molecule:putative heat shock protein;
PDBTitle: crystal structure of hsp104
53c5vq9D_
not modelled 97.3 15
PDB header:protein binding
Chain: D: PDB Molecule:pachytene checkpoint protein 2 homolog;
PDBTitle: structure of human trip13, apo form
54c2r44A_
not modelled 97.3 11
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative atpase (chu_0153) from cytophaga2 hutchinsonii atcc 33406 at 2.00 a resolution
55c3cf2B_
not modelled 97.3 16
PDB header:transport protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97/vcp in complex with adp/amp-pnp
56c4r7zB_
not modelled 97.3 14
PDB header:hydrolase
Chain: B: PDB Molecule:cell division control protein 21;
PDBTitle: pfmcm-aaa double-octamer
57c1hqcB_
not modelled 97.3 13
PDB header:hydrolase
Chain: B: PDB Molecule:ruvb;
PDBTitle: structure of ruvb from thermus thermophilus hb8
58c4b4tL_
not modelled 97.3 10
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease subunit rpt4;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
59c6i26A_
not modelled 97.3 14
PDB header:motor protein
Chain: A: PDB Molecule:midasin,midasin,midasin,midasin;
PDBTitle: rea1 wild type amppnp state
60c3jc72_
not modelled 97.3 15
PDB header:hydrolase
Chain: 2: PDB Molecule:dna replication licensing factor mcm2;
PDBTitle: structure of the eukaryotic replicative cmg helicase and pumpjack2 motion
61c1in8A_
not modelled 97.2 12
PDB header:dna binding protein
Chain: A: PDB Molecule:holliday junction dna helicase ruvb;
PDBTitle: thermotoga maritima ruvb t158v
62c4xgcA_
not modelled 97.2 11
PDB header:dna binding protein
Chain: A: PDB Molecule:origin recognition complex subunit 1;
PDBTitle: crystal structure of the eukaryotic origin recognition complex
63c4b4tI_
not modelled 97.2 12
PDB header:hydrolase
Chain: I: PDB Molecule:26s protease regulatory subunit 4 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
64c4xguB_
not modelled 97.2 15
PDB header:atp-binding protein
Chain: B: PDB Molecule:putative pachytene checkpoint protein 2;
PDBTitle: structure of c. elegans pch-2
65c3bosA_
not modelled 97.2 8
PDB header:hydrolase regulator,dna binding protein
Chain: A: PDB Molecule:putative dna replication factor;
PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution
66c6edoA_
not modelled 97.2 14
PDB header:motor protein
Chain: A: PDB Molecule:midasin;
PDBTitle: full-length s. pombe mdn1 in the presence of amppnp (ring region)
67c5uj7B_
not modelled 97.2 16
PDB header:dna binding protein
Chain: B: PDB Molecule:origin recognition complex subunit 1;
PDBTitle: structure of the active form of human origin recognition complex2 atpase motor module, complex subunits 1, 4, 5
68d1gvnb_
not modelled 97.2 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Plasmid maintenance system epsilon/zeta, toxin zeta subunit
69c5ifwB_
not modelled 97.2 16
PDB header:signaling protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: quantitative interaction mapping reveals an extended ubiquitin2 regulatory domain in aspl that disrupts functional p97 hexamers and3 induces cell death
70c3jc76_
not modelled 97.1 16
PDB header:hydrolase
Chain: 6: PDB Molecule:dna replication licensing factor mcm6;
PDBTitle: structure of the eukaryotic replicative cmg helicase and pumpjack2 motion
71c5u8s4_
not modelled 97.1 14
PDB header:replication
Chain: 4: PDB Molecule:dna replication licensing factor mcm4;
PDBTitle: structure of eukaryotic cmg helicase at a replication fork
72c2zamA_
not modelled 97.1 16
PDB header:protein transport
Chain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b;
PDBTitle: crystal structure of mouse skd1/vps4b apo-form
73d1jbka_
not modelled 97.1 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
74c3ja83_
not modelled 97.1 14
PDB header:hydrolase
Chain: 3: PDB Molecule:minichromosome maintenance 3;
PDBTitle: cryo-em structure of the mcm2-7 double hexamer
75c3ja82_
not modelled 97.1 16
PDB header:hydrolase
Chain: 2: PDB Molecule:minichromosome maintenance 2;
PDBTitle: cryo-em structure of the mcm2-7 double hexamer
76d1ixza_
not modelled 97.1 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
77c2p5tD_
not modelled 97.1 15
PDB header:transcription regulator
Chain: D: PDB Molecule:pezt;
PDBTitle: molecular and structural characterization of the pezat chromosomal2 toxin-antitoxin system of the human pathogen streptococcus pneumoniae
78c1xwiA_
not modelled 97.1 16
PDB header:protein transport
Chain: A: PDB Molecule:skd1 protein;
PDBTitle: crystal structure of vps4b
79c1sxjB_
not modelled 97.0 15
PDB header:replication
Chain: B: PDB Molecule:activator 1 37 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
80c3jc57_
not modelled 97.0 20
PDB header:hydrolase
Chain: 7: PDB Molecule:dna replication licensing factor mcm7;
PDBTitle: structure of the eukaryotic replicative cmg helicase and pumpjack2 motion
81c5udb7_
not modelled 97.0 18
PDB header:replication
Chain: 7: PDB Molecule:dna replication licensing factor mcm7;
PDBTitle: structural basis of mcm2-7 replicative helicase loading by orc-cdc62 and cdt1
82c1sxjC_
not modelled 97.0 16
PDB header:replication
Chain: C: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
83c3cf1C_
not modelled 97.0 17
PDB header:transport protein
Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97/vcp in complex with adp/adp.alfx
84c6orbA_
not modelled 97.0 15
PDB header:motor protein
Chain: A: PDB Molecule:midasin;
PDBTitle: full-length s. pombe mdn1 in the presence of atp and rbin-1
85c2chvE_
not modelled 97.0 16
PDB header:dna-binding protein
Chain: E: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c adpnp complex
86c3ja84_
not modelled 97.0 17
PDB header:hydrolase
Chain: 4: PDB Molecule:minichromosome maintenance 4;
PDBTitle: cryo-em structure of the mcm2-7 double hexamer
87c1sxjE_
not modelled 97.0 12
PDB header:replication
Chain: E: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
88c4d2qC_
not modelled 96.9 15
PDB header:chaperone
Chain: C: PDB Molecule:clpb;
PDBTitle: negative-stain electron microscopy of e. coli clpb mutant e432a (bap2 form bound to clpp)
89c2x8aA_
not modelled 96.9 14
PDB header:nuclear protein
Chain: A: PDB Molecule:nuclear valosin-containing protein-like;
PDBTitle: human nuclear valosin containing protein like (nvl), c-2 terminal aaa-atpase domain
90c6djuA_
not modelled 96.9 13
PDB header:chaperone
Chain: A: PDB Molecule:chaperone protein clpb;
PDBTitle: mtb clpb in complex with atpgammas and casein, conformer 1
91c3jc73_
not modelled 96.9 14
PDB header:hydrolase
Chain: 3: PDB Molecule:dna replication licensing factor mcm3;
PDBTitle: structure of the eukaryotic replicative cmg helicase and pumpjack2 motion
92c5e7pA_
not modelled 96.9 15
PDB header:hydrolase
Chain: A: PDB Molecule:cell division control protein cdc48;
PDBTitle: crystal structure of msmeg_0858 (uniprot a0qqs4), a aaa atpase.
93c6epcJ_
not modelled 96.9 8
PDB header:hydrolase
Chain: J: PDB Molecule:26s proteasome regulatory subunit 8;
PDBTitle: ground state 26s proteasome (gs2)
94c3zw6B_
not modelled 96.8 8
PDB header:photosynthesis
Chain: B: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase activase 1,
PDBTitle: model of hexameric aaa domain arrangement of green-type rubisco2 activase from tobacco.
95c6hv93_
not modelled 96.8 13
PDB header:dna binding protein
Chain: 3: PDB Molecule:dna replication licensing factor mcm3;
PDBTitle: s. cerevisiae cmg-pol epsilon-dna
96c6i27A_
not modelled 96.8 14
PDB header:motor protein
Chain: A: PDB Molecule:midasin,midasin,midasin,midasin,midasin,midasin,midasin;
PDBTitle: rea1 aaa2l-h2alpha deletion mutant in amppnp state
97c5w0tA_
not modelled 96.8 10
PDB header:hydrolase
Chain: A: PDB Molecule:protein msp1;
PDBTitle: crystal structure of monomeric msp1 from s. cerevisiae
98c6epdM_
not modelled 96.8 5
PDB header:hydrolase
Chain: M: PDB Molecule:26s proteasome regulatory subunit 6a;
PDBTitle: substrate processing state 26s proteasome (sps1)
99c3ja87_
not modelled 96.8 18
PDB header:hydrolase
Chain: 7: PDB Molecule:minichromosome maintenance 7;
PDBTitle: cryo-em structure of the mcm2-7 double hexamer
100c6b5cA_
not modelled 96.8 10
PDB header:cell cycle
Chain: A: PDB Molecule:katanin p60 atpase-containing subunit a-like 1;
PDBTitle: structural basis for katanin self-assembly
101c6e111_
not modelled 96.8 15
PDB header:protein transport
Chain: 1: PDB Molecule:heat shock protein 101;
PDBTitle: ptex core complex in the resetting (compact) state
102c3hteC_
not modelled 96.8 13
PDB header:motor protein
Chain: C: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx;
PDBTitle: crystal structure of nucleotide-free hexameric clpx
103c4z8xC_
not modelled 96.8 15
PDB header:hydrolase
Chain: C: PDB Molecule:atp-dependent zinc metalloprotease ftsh;
PDBTitle: truncated ftsh from a. aeolicus
104c3j96F_
not modelled 96.7 15
PDB header:hydrolase
Chain: F: PDB Molecule:vesicle-fusing atpase;
PDBTitle: structure of 20s supercomplex determined by single particle2 cryoelectron microscopy (state i)
105c4b4tK_
not modelled 96.7 13
PDB header:hydrolase
Chain: K: PDB Molecule:26s protease regulatory subunit 6b homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
106c6on2A_
not modelled 96.7 15
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent protease la;
PDBTitle: lon protease from yersinia pestis with y2853 substrate
107c5wc0D_
not modelled 96.7 12
PDB header:motor protein
Chain: D: PDB Molecule:meiotic spindle formation protein mei-1;
PDBTitle: katanin hexamer in spiral conformation
108c4b4tJ_
not modelled 96.7 9
PDB header:hydrolase
Chain: J: PDB Molecule:26s protease regulatory subunit 8 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
109c1nsfA_
not modelled 96.7 13
PDB header:protein transport
Chain: A: PDB Molecule:n-ethylmaleimide sensitive factor;
PDBTitle: d2 hexamerization domain of n-ethylmaleimide sensitive factor (nsf)
110c2dhrC_
not modelled 96.7 13
PDB header:hydrolase
Chain: C: PDB Molecule:ftsh;
PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l)
111c6matE_
not modelled 96.6 13
PDB header:ribosomal protein
Chain: E: PDB Molecule:rix7 mutant;
PDBTitle: cryo-em structure of the essential ribosome assembly aaa-atpase rix7
112c3m6aC_
not modelled 96.6 13
PDB header:hydrolase
Chain: C: PDB Molecule:atp-dependent protease la 1;
PDBTitle: crystal structure of bacillus subtilis lon c-terminal domain
113c5mpaL_
not modelled 96.6 10
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease subunit rpt4;
PDBTitle: 26s proteasome in presence of atp (s2)
114d1njfa_
not modelled 96.6 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
115c3h4mC_
not modelled 96.6 11
PDB header:hydrolase
Chain: C: PDB Molecule:proteasome-activating nucleotidase;
PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase
116c1iy2A_
not modelled 96.6 15
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh;
PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus
117c6em8F_
not modelled 96.6 14
PDB header:chaperone
Chain: F: PDB Molecule:atp-dependent clp protease atp-binding subunit clpc;
PDBTitle: s.aureus clpc resting state, c2 symmetrised
118d1ny5a2
not modelled 96.5 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
119c4yplE_
not modelled 96.5 10
PDB header:hydrolase
Chain: E: PDB Molecule:lon protease;
PDBTitle: crystal structure of a hexameric lona protease bound to three adps
120c6hv92_
not modelled 96.5 15
PDB header:dna binding protein
Chain: 2: PDB Molecule:dna replication licensing factor mcm2;
PDBTitle: s. cerevisiae cmg-pol epsilon-dna

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite