Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1585c_(-)_1786591_1787106
DateFri Aug 2 13:30:17 BST 2019
Unique Job IDc9ee86112f1b7772
SequenceMSRHHNIVIV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:33.371 Y:37.041 Z:27.014
Model (left) based on template d2dx5a1
Top template information
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:VPS36 N-terminal domain-like
Confidence and coverage
Confidence: 53.4% Coverage: 26%
44 residues ( 26% of your sequence) have been modelled with 53.4% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2dx5a1



53.4 20
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:VPS36 N-terminal domain-like
2c2mkcC_



25.9 39
PDB header:splicing
Chain: C: PDB Molecule:pre-mrna-splicing factor cwc26;
PDBTitle: cooperative structure of the heterotrimeric pre-mrna retention and2 splicing complex
3c5zwoY_



24.4 39
PDB header:splicing
Chain: Y: PDB Molecule:pre-mrna-splicing factor cwc26;
PDBTitle: cryo-em structure of the yeast b complex at average resolution of 3.92 angstrom
4c3ic8D_



22.1 25
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:uncharacterized gst-like proteinprotein;
PDBTitle: the crystal structure of a gst-like protein from pseudomonas syringae2 to 2.4a
5c1yypB_



21.6 40
PDB header:replication/transferase
Chain: B: PDB Molecule:dna polymerase;
PDBTitle: crystal structure of cytomegalovirus ul44 bound to c-terminal peptide2 from cmv ul54
6d1s21a_



19.5 27
Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:AvrPphF ORF2, a type III effector
7c1s21A_



19.5 27
PDB header:chaperone
Chain: A: PDB Molecule:orf2;
PDBTitle: crystal structure of avrpphf orf2, a type iii effector from p.2 syringae
8c5td3B_



18.0 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:catechol 1,2-dioxygenase;
PDBTitle: crystal structure of catechol 1,2-dioxygenase from burkholderia2 vietnamiensis
9c4a0tB_



15.5 31
PDB header:viral protein
Chain: B: PDB Molecule:tail fiber protein;
PDBTitle: structure of the carboxy-terminal domain of bacteriophage t7 fibre2 gp17 containing residues 371-553.
10c2orvB_



13.6 20
PDB header:transferase
Chain: B: PDB Molecule:thymidine kinase;
PDBTitle: human thymidine kinase 1 in complex with tp4a
11c3mp6A_



12.4 38
PDB header:histone binding protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein,linker,saga-associated
PDBTitle: complex structure of sgf29 and dimethylated h3k4
12d2bjqa2



9.6 25
Fold:MFPT repeat-like
Superfamily:MFPT repeat-like
Family:MFPT repeat
13c3icvA_



8.7 14
PDB header:hydrolase
Chain: A: PDB Molecule:lipase b;
PDBTitle: structural consequences of a circular permutation on lipase b from2 candida antartica
14d1t62a_



8.7 43
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:Hypothetical protein EF3133
15d2fnoa2



8.2 29
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione S-transferase (GST), N-terminal domain
16c6j0fE_



8.0 18
PDB header:protein transport
Chain: E: PDB Molecule:pvc16;
PDBTitle: cryo-em structure of an extracellular contractile injection system,2 pvc sheath/tube terminator in extended state
17c6adqI_



7.7 45
PDB header:electron transport
Chain: I: PDB Molecule:cytochrome c oxidase subunit ctaj;
PDBTitle: respiratory complex ciii2civ2sod2 from mycobacterium smegmatis
18d1p5dx1



6.7 17
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
19c4kf9A_



6.6 18
PDB header:transferase
Chain: A: PDB Molecule:glutathione s-transferase protein;
PDBTitle: crystal structure of a glutathione transferase family member from2 ralstonia solanacearum, target efi-501780, with bound gsh coordinated3 to a zinc ion, ordered active site
20c3s9xA_



6.4 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:asch domain;
PDBTitle: high resolution crystal structure of asch domain from lactobacillus2 crispatus jv v101
21c3eitB_



not modelled 5.7 30
PDB header:unknown function
Chain: B: PDB Molecule:putative atp/gtp binding protein;
PDBTitle: the 2.6 angstrom crystal structure of chbp, the cif homologue from2 burkholderia pseudomallei
22c5wylB_



not modelled 5.6 43
PDB header:ribosomal protein/nuclear protein
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of chaetomium thermophilum utp10 n-terminal domain2 in complex with utp17 c-terminal helices
23c6hwhR_



not modelled 5.5 56
PDB header:electron transport
Chain: R: PDB Molecule:msmeg_4693;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis

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