Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1591_(-)_1791577_1792242
DateFri Aug 2 13:30:18 BST 2019
Unique Job ID4ecaa5a8c1c54ec9
SequenceVTEPPGFGGP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:14.835 Y:34.683 Z:19.988
Model (left) based on template c6humQ_
Top template information
PDB header:proton transport
Chain: Q: PDB Molecule:proton-translocating nadh-quinone dehydrogenase subunit q
PDBTitle: structure of the photosynthetic complex i from thermosynechococcus2 elongatus
Confidence and coverage
Confidence: 57.6% Coverage: 10%
23 residues ( 10% of your sequence) have been modelled with 57.6% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6humQ_



57.6 13
PDB header:proton transport
Chain: Q: PDB Molecule:proton-translocating nadh-quinone dehydrogenase subunit q
PDBTitle: structure of the photosynthetic complex i from thermosynechococcus2 elongatus
2c3wmmP_



53.6 32
PDB header:photosynthesis
Chain: P: PDB Molecule:lh1 beta polypeptide;
PDBTitle: crystal structure of the lh1-rc complex from thermochromatium tepidum2 in c2 form
3c5kbuA_



24.6 16
PDB header:transport protein
Chain: A: PDB Molecule:glutamate receptor 2,voltage-dependent calcium channel
PDBTitle: cryo-em structure of glua2-2xstz complex at 7.8 angstrom resolution
4c2jpwA_



20.5 35
PDB header:contractile protein
Chain: A: PDB Molecule:troponin i, cardiac muscle;
PDBTitle: solution structure of the bisphosphorylated cardiac2 specific n-extension of cardiac troponin i
5d2za7a1



16.9 35
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
6c6et5u_



14.5 29
PDB header:photosynthesis
Chain: U: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
7d1r03a_



14.3 40
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
8d2ceia1



13.0 35
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
9d1z6om1



12.3 30
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
10c3vnxA_



12.1 40
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferritin;
PDBTitle: crystal structure of ferritin from multicellular green algae, ulva2 pertusa.
11d1bg7a_



11.3 35
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
12d1lb3a_



11.3 35
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
13d1rcda_



11.3 35
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
14c3a9qR_



11.0 30
PDB header:oxidoreductase
Chain: R: PDB Molecule:
PDBTitle: crystal structure analysis of e173a variant of the soybean2 ferritin sfer4
15d1lghb_



10.1 26
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
16c1wrgA_



8.2 26
PDB header:membrane protein
Chain: A: PDB Molecule:light-harvesting protein b-880, beta chain;
PDBTitle: light-harvesting complex 1 beta subunit from wild-type2 rhodospirillum rubrum
17d1mfra_



8.0 35
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
18c6f0kA_



7.8 16
PDB header:membrane protein
Chain: A: PDB Molecule:cytochrome c family protein;
PDBTitle: alternative complex iii
19c2lorA_



7.6 8
PDB header:membrane protein
Chain: A: PDB Molecule:transmembrane protein 141;
PDBTitle: backbone structure of human membrane protein tmem141
20c2y8sE_



7.6 35
PDB header:membrane protein
Chain: E: PDB Molecule:rhoptry neck protein 2;
PDBTitle: co-structure of an ama1 mutant (y230a) with a surface exposed region2 of ron2 from toxoplasma gondii
21c2y8tB_



not modelled 7.3 35
PDB header:membrane protein
Chain: B: PDB Molecule:rhoptry neck protein 2;
PDBTitle: co-structure of ama1 with a surface exposed region of ron2 from2 toxoplasma gondii
22c2hn8A_



not modelled 6.5 40
PDB header:viral protein
Chain: A: PDB Molecule:protein pb1-f2;
PDBTitle: structural characterization and oligomerization of pb1-f2,2 a pro-apoptotic influenza a virus protein
23c5h7yB_



not modelled 6.3 36
PDB header:hydrolase inhibitor/peptide
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: structure of immunity protein tplei of t6ss from pseudomonas2 aeruginosa complexed with "l" peptide
24c6a4uD_



not modelled 5.5 40
PDB header:metal binding protein
Chain: D: PDB Molecule:ferritin;
PDBTitle: the first crystal structure of crustacean ferritin that is a hybrid2 type of h and l ferritin
25d1ijda_



not modelled 5.4 23
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
26c1g70B_



not modelled 5.3 60
PDB header:viral protein/rna
Chain: B: PDB Molecule:rsg-1.2 peptide;
PDBTitle: complex of hiv-1 rre-iib rna with rsg-1.2 peptide
27c3rnvA_



not modelled 5.3 38
PDB header:hydrolase
Chain: A: PDB Molecule:helper component proteinase;
PDBTitle: structure of the autocatalytic cysteine protease domain of potyvirus2 helper-component proteinase

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below