Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1641_(infC)_1852280_1852885
DateFri Aug 2 13:30:23 BST 2019
Unique Job ID547f83da09c8eaf5
SequenceISTETRVNER ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:73.253 Y:49.390 Z:53.450
Model (left) based on template c5lmtX_
Top template information
PDB header:ribosome
Chain: X: PDB Molecule:translation initiation factor if-3;
PDBTitle: structure of bacterial 30s-if1-if3-mrna-trna translation pre-2 initiation complex(state-3)
Confidence and coverage
Confidence:100.0% Coverage: 81%
163 residues ( 81% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5lmtX_



100.0 53
PDB header:ribosome
Chain: X: PDB Molecule:translation initiation factor if-3;
PDBTitle: structure of bacterial 30s-if1-if3-mrna-trna translation pre-2 initiation complex(state-3)
2c6nf8z_



100.0 17
PDB header:ribosomal protein
Chain: Z: PDB Molecule:
PDBTitle: structure of human mitochondrial translation initiation factor 3 bound2 to the small ribosomal subunit -class i
3c2crqA_



100.0 19
PDB header:translation
Chain: A: PDB Molecule:mitochondrial translational initiation factor 3;
PDBTitle: solution structure of c-terminal domain of riken cdna2 2810012l14
4c2m71A_



100.0 27
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-3;
PDBTitle: solution structure of the a c-terminal domain of translation2 initiation factor if-3 from campylobacter jejuni
5d1tiga_



100.0 48
Fold:IF3-like
Superfamily:Translation initiation factor IF3, C-terminal domain
Family:Translation initiation factor IF3, C-terminal domain
6d2ifea_



100.0 41
Fold:IF3-like
Superfamily:Translation initiation factor IF3, C-terminal domain
Family:Translation initiation factor IF3, C-terminal domain
7d1tifa_



100.0 53
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Translation initiation factor IF3, N-terminal domain
Family:Translation initiation factor IF3, N-terminal domain
8d1i96v_



99.9 55
Fold:IF3-like
Superfamily:Translation initiation factor IF3, C-terminal domain
Family:Translation initiation factor IF3, C-terminal domain
9c6o6dA_



99.9 43
PDB header:ligase
Chain: A: PDB Molecule:translation initiation factor if-3;
PDBTitle: n-terminal domain of translation initiation factor if-3 from2 helicobacter pylori
10d2ouxa2



50.0 24
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
11c2m4iA_



47.8 14
PDB header:cell cycle
Chain: A: PDB Molecule:septum site-determining protein minc;
PDBTitle: solution structure of bacillus subtilis minc n-terminal domain
12d2yvxa2



47.5 28
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
13d1vr9a3



47.5 20
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
14c1vr9B_



45.9 20
PDB header:unknown function
Chain: B: PDB Molecule:cbs domain protein/act domain protein;
PDBTitle: crystal structure of a cbs domain pair/act domain protein (tm0892)2 from thermotoga maritima at 1.70 a resolution
15d1zfja4



45.1 25
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
16c3lhhA_



43.1 20
PDB header:membrane protein
Chain: A: PDB Molecule:cbs domain protein;
PDBTitle: the crystal structure of cbs domain protein from shewanella2 oneidensis mr-1.
17c5ks7A_



41.1 17
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:carnitine transport atp-binding protein opuca;
PDBTitle: crystal structure of listeria monocytogenes opuca cbs domain dimer in2 complex with cyclic-di-amp
18c3jtfB_



39.7 32
PDB header:transport protein
Chain: B: PDB Molecule:magnesium and cobalt efflux protein;
PDBTitle: the cbs domain pair structure of a magnesium and cobalt efflux protein2 from bordetella parapertussis in complex with amp
19d2riha1



39.6 28
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
20d2ooxe2



38.1 24
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
21c2yvxD_



not modelled 37.5 28
PDB header:transport protein
Chain: D: PDB Molecule:mg2+ transporter mgte;
PDBTitle: crystal structure of magnesium transporter mgte
22d1k4ia_



not modelled 36.7 20
Fold:YrdC/RibB
Superfamily:YrdC/RibB
Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
23d2yzqa2



not modelled 36.1 23
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
24d3ddja1



not modelled 35.3 17
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
25c2p9mD_



not modelled 32.2 15
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein mj0922;
PDBTitle: crystal structure of conserved hypothetical protein mj0922 from2 methanocaldococcus jannaschii dsm 2661
26c3lfrB_



not modelled 31.0 32
PDB header:transport protein
Chain: B: PDB Molecule:putative metal ion transporter;
PDBTitle: the crystal structure of a cbs domain from a putative metal ion2 transporter bound to amp from pseudomonas syringae to 1.55a
27c3ctuB_



not modelled 30.6 17
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:cbs domain protein;
PDBTitle: crystal structure of cbs domain protein from streptococcus2 pneumoniae tigr4
28d1t23a_



not modelled 30.2 22
Fold:Chromosomal protein MC1
Superfamily:Chromosomal protein MC1
Family:Chromosomal protein MC1
29d1a9xa3



not modelled 29.8 15
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
30d1pvma4



not modelled 28.4 28
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
31c4gqvA_



not modelled 27.5 22
PDB header:protein binding
Chain: A: PDB Molecule:cbs domain-containing protein cbsx1, chloroplastic;
PDBTitle: crystal structure of cbs-pair protein, cbsx1 from arabidopsis thaliana
32c2qh1B_



not modelled 27.2 28
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein ta0289;
PDBTitle: structure of ta289, a cbs-rubredoxin-like protein, in its fe+2-bound2 state
33c5x8oA_



not modelled 26.6 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: crystal structure of gmp reductase from trypanosoma brucei with2 guanosine 5'-triphosphate
34c4ivnB_



not modelled 25.1 14
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: the vibrio vulnificus nanr protein complexed with mannac-6p
35c4hg0A_



not modelled 24.4 36
PDB header:transport protein
Chain: A: PDB Molecule:magnesium and cobalt efflux protein corc;
PDBTitle: crystal structure of magnesium and cobalt efflux protein corc,2 northeast structural genomics consortium (nesg) target er40
36c4p6dA_



not modelled 24.1 9
PDB header:lyase
Chain: A: PDB Molecule:3,4-dihydroxy-2-butanone 4-phosphate synthase;
PDBTitle: structure of ribb complexed with po4 ion
37c3ju2A_



not modelled 24.0 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein smc04130;
PDBTitle: crystal structure of protein smc04130 from sinorhizobium meliloti 1021
38c5dotA_



not modelled 23.6 28
PDB header:ligase
Chain: A: PDB Molecule:carbamoyl-phosphate synthase [ammonia], mitochondrial;
PDBTitle: crystal structure of human carbamoyl phosphate synthetase i (cps1),2 apo form
39c1yavB_



not modelled 23.1 17
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein bsu14130;
PDBTitle: crystal structure of cbs domain-containing protein ykul2 from bacillus subtilis
40c2emqA_



not modelled 22.9 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical conserved protein;
PDBTitle: hypothetical conserved protein (gk1048) from geobacillus kaustophilus
41c3tsdA_



not modelled 22.8 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: crystal structure of inosine-5'-monophosphate dehydrogenase from2 bacillus anthracis str. ames complexed with xmp
42d2hc5a1



not modelled 22.3 14
Fold:FlaG-like
Superfamily:FlaG-like
Family:FlaG-like
43c2x3yA_



not modelled 22.2 18
PDB header:isomerase
Chain: A: PDB Molecule:phosphoheptose isomerase;
PDBTitle: crystal structure of gmha from burkholderia pseudomallei
44c3lmzA_



not modelled 21.4 14
PDB header:isomerase
Chain: A: PDB Molecule:putative sugar isomerase;
PDBTitle: crystal structure of putative sugar isomerase. (yp_001305105.1) from2 parabacteroides distasonis atcc 8503 at 1.44 a resolution
45c5iipA_



not modelled 20.8 17
PDB header:transport protein
Chain: A: PDB Molecule:glycine betaine/carnitine/choline abc transporter%2c atp-
PDBTitle: staphylococcus aureus opuca
46c4zexA_



not modelled 20.0 13
PDB header:unknown function
Chain: A: PDB Molecule:pfhad1;
PDBTitle: crystal structure of pfhad1 in complex with glyceraldehyde-3-phosphate
47c2k8vA_



not modelled 18.9 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin domain-containing protein 12;
PDBTitle: solution structure of oxidised erp18
48d1vima_



not modelled 18.9 23
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
49d1rgra_



not modelled 18.5 15
Fold:PDZ domain-like
Superfamily:PDZ domain-like
Family:PDZ domain
50c3shoA_



not modelled 18.2 16
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, rpir family;
PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain)
51c5douC_



not modelled 18.1 27
PDB header:ligase
Chain: C: PDB Molecule:carbamoyl-phosphate synthase [ammonia], mitochondrial;
PDBTitle: crystal structure of human carbamoyl phosphate synthetase i (cps1),2 ligand-bound form
52c1zfjA_



not modelled 17.5 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine monophosphate dehydrogenase;
PDBTitle: inosine monophosphate dehydrogenase (impdh; ec 1.1.1.205) from2 streptococcus pyogenes
53c2xhzC_



not modelled 17.5 18
PDB header:isomerase
Chain: C: PDB Molecule:arabinose 5-phosphate isomerase;
PDBTitle: probing the active site of the sugar isomerase domain from e. coli2 arabinose-5-phosphate isomerase via x-ray crystallography
54d1hf2a2



not modelled 16.2 13
Fold:Cell-division inhibitor MinC, N-terminal domain
Superfamily:Cell-division inhibitor MinC, N-terminal domain
Family:Cell-division inhibitor MinC, N-terminal domain
55c3owvA_



not modelled 16.1 26
PDB header:hydrolase
Chain: A: PDB Molecule:dna-entry nuclease;
PDBTitle: structural insights into catalytic and substrate binding mechanisms of2 the strategic enda nuclease from streptococcus pneumoniae
56c4nocA_



not modelled 16.1 15
PDB header:signaling protein
Chain: A: PDB Molecule:putative signal transduction protein with cbs domains;
PDBTitle: the crystal structure of a cbs domain-containing protein of unknown2 function from kribbella flavida dsm 17836.
57c2i6kA_



not modelled 15.3 15
PDB header:isomerase
Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 1;
PDBTitle: crystal structure of human type i ipp isomerase complexed with a2 substrate analog
58c4dqwB_



not modelled 15.1 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: crystal structure analysis of pa3770
59d1qs0a_



not modelled 14.5 14
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase PP module
60c4ffnA_



not modelled 14.4 26
PDB header:ligase/substrate
Chain: A: PDB Molecule:pylc;
PDBTitle: pylc in complex with d-ornithine and amppnp
61c2ouxB_



not modelled 13.8 17
PDB header:transport protein
Chain: B: PDB Molecule:magnesium transporter;
PDBTitle: crystal structure of the soluble part of a magnesium transporter
62d1ozia_



not modelled 13.8 10
Fold:PDZ domain-like
Superfamily:PDZ domain-like
Family:PDZ domain
63c4qfhA_



not modelled 13.6 29
PDB header:isomerase
Chain: A: PDB Molecule:glucose-6-phosphate isomerase;
PDBTitle: structure of a glucose-6-phosphate isomerase from trypanosoma cruzi
64c3ljkA_



not modelled 13.0 26
PDB header:isomerase
Chain: A: PDB Molecule:glucose-6-phosphate isomerase;
PDBTitle: glucose-6-phosphate isomerase from francisella tularensis.
65c4ot7A_



not modelled 12.8 27
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase;
PDBTitle: x-structure of a variant of ncr from zymomonas mobilis
66c1t10A_



not modelled 12.7 29
PDB header:isomerase
Chain: A: PDB Molecule:glucose-6-phosphate isomerase;
PDBTitle: phosphoglucose isomerase from leishmania mexicana in complex with2 substrate d-fructose-6-phosphate
67c2o2cB_



not modelled 12.5 33
PDB header:isomerase
Chain: B: PDB Molecule:glucose-6-phosphate isomerase, glycosomal;
PDBTitle: crystal structure of phosphoglucose isomerase from t. brucei2 containing glucose-6-phosphate in the active site
68d1m3sa_



not modelled 12.5 16
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
69c4z87B_



not modelled 12.4 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: structure of the imp dehydrogenase from ashbya gossypii bound to gdp
70d1u0fa_



not modelled 12.3 21
Fold:SIS domain
Superfamily:SIS domain
Family:Phosphoglucose isomerase, PGI
71c2yvzA_



not modelled 12.2 11
PDB header:transport protein
Chain: A: PDB Molecule:mg2+ transporter mgte;
PDBTitle: crystal structure of magnesium transporter mgte cytosolic domain,2 mg2+-free form
72c4qfsC_



not modelled 12.2 24
PDB header:signaling protein/inhibitor/activator
Chain: C: PDB Molecule:5'-amp-activated protein kinase subunit gamma-1;
PDBTitle: structure of ampk in complex with br2-a769662core activator and2 staurosporine inhibitor
73c2pfiA_



not modelled 12.1 17
PDB header:transport protein
Chain: A: PDB Molecule:chloride channel protein clc-ka;
PDBTitle: crystal structure of the cytoplasmic domain of the human2 chloride channel clc-ka
74c6o9l6_



not modelled 12.0 20
PDB header:transcription/dna
Chain: 6: PDB Molecule:general transcription factor iih subunit 2;
PDBTitle: human holo-pic in the closed state
75d1viza_



not modelled 12.0 16
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
76c2l8bA_



not modelled 11.5 13
PDB header:hydrolase
Chain: A: PDB Molecule:protein trai;
PDBTitle: trai (381-569)
77d1hm5a_



not modelled 11.4 24
Fold:SIS domain
Superfamily:SIS domain
Family:Phosphoglucose isomerase, PGI
78c2kzhA_



not modelled 11.1 21
PDB header:isomerase
Chain: A: PDB Molecule:tryptophan biosynthesis protein trpcf;
PDBTitle: three-dimensional structure of a truncated phosphoribosylanthranilate2 isomerase (residues 255-384) from escherichia coli
79d2g0wa1



not modelled 11.0 24
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:IolI-like
80d1jr1a4



not modelled 10.9 18
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
81c3eukC_



not modelled 10.8 17
PDB header:cell cycle
Chain: C: PDB Molecule:chromosome partition protein mukb, linker;
PDBTitle: crystal structure of muke-mukf(residues 292-443)-mukb(head domain)-2 atpgammas complex, asymmetric dimer
82c3zigA_



not modelled 10.5 22
PDB header:cell cycle
Chain: A: PDB Molecule:sepf-like protein;
PDBTitle: sepf-like protein from pyrococcus furiosus
83c2zdsB_



not modelled 10.4 32
PDB header:dna binding protein
Chain: B: PDB Molecule:putative dna-binding protein;
PDBTitle: crystal structure of sco6571 from streptomyces coelicolor a3(2)
84c5uqiA_



not modelled 10.4 20
PDB header:isomerase
Chain: A: PDB Molecule:phosphosugar isomerase;
PDBTitle: e. coli cft073 c3406 in complex with a5p
85c3fxaA_



not modelled 10.0 20
PDB header:sugar binding protein
Chain: A: PDB Molecule:sis domain protein;
PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution
86c3m1rF_



not modelled 9.9 29
PDB header:hydrolase
Chain: F: PDB Molecule:formimidoylglutamase;
PDBTitle: the crystal structure of formimidoylglutamase from bacillus2 subtilis subsp. subtilis str. 168
87c4p9gA_



not modelled 9.8 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:2,4'-dihydroxyacetophenone dioxygenase;
PDBTitle: structure of the 2,4'-dihydroxyacetophenone dioxygenase from2 alcaligenes sp.
88c2l1iA_



not modelled 9.8 27
PDB header:transcription
Chain: A: PDB Molecule:hltf protein;
PDBTitle: nmr structure of the hltf hiran domain
89d1x94a_



not modelled 9.7 11
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
90d1vjea_



not modelled 9.6 36
Fold:LuxS/MPP-like metallohydrolase
Superfamily:LuxS/MPP-like metallohydrolase
Family:Autoinducer-2 production protein LuxS
91d1gsoa2



not modelled 9.6 31
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
92c4kw2A_



not modelled 9.4 7
PDB header:isomerase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative uncharacterized protein (bdi_1873)2 from parabacteroides distasonis atcc 8503 at 2.32 a resolution
93d1q50a_



not modelled 9.0 29
Fold:SIS domain
Superfamily:SIS domain
Family:Phosphoglucose isomerase, PGI
94d1gzda_



not modelled 8.9 24
Fold:SIS domain
Superfamily:SIS domain
Family:Phosphoglucose isomerase, PGI
95c2yt7A_



not modelled 8.8 15
PDB header:protein transport
Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family
PDBTitle: solution structure of the pdz domain of amyloid beta a42 precursor protein-binding family a member 3
96c3k1rA_



not modelled 8.8 13
PDB header:structural protein
Chain: A: PDB Molecule:harmonin;
PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans
97c1hf2A_



not modelled 8.7 11
PDB header:cell division protein
Chain: A: PDB Molecule:septum site-determining protein minc;
PDBTitle: crystal structure of the bacterial cell-division inhibitor minc from2 t. maritima
98d1iata_



not modelled 8.6 24
Fold:SIS domain
Superfamily:SIS domain
Family:Phosphoglucose isomerase, PGI
99c3k2yD_



not modelled 8.6 8
PDB header:nucleotide binding protein
Chain: D: PDB Molecule:uncharacterized protein lp_0118;
PDBTitle: crystal structure of protein lp_0118 from lactobacillus2 plantarum,northeast structural genomics consortium target3 lpr91b

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