Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1648_(-)_1857738_1858544
DateFri Aug 2 13:30:24 BST 2019
Unique Job ID63ab0809a57203e4
SequenceMIYRVACLLA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:41.868 Y:39.594 Z:52.475
Model (left) based on template d3b45a1
Top template information
Fold:Rhomboid-like
Superfamily:Rhomboid-like
Family:Rhomboid-like
Confidence and coverage
Confidence: 98.1% Coverage: 62%
165 residues ( 62% of your sequence) have been modelled with 98.1% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d3b45a1



98.1 13
Fold:Rhomboid-like
Superfamily:Rhomboid-like
Family:Rhomboid-like
2d2nr9a1



97.7 15
Fold:Rhomboid-like
Superfamily:Rhomboid-like
Family:Rhomboid-like
3c3ky7A_



7.4 33
PDB header:transferase
Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase;
PDBTitle: 2.35 angstrom resolution crystal structure of a putative trna2 (guanine-7-)-methyltransferase (trmd) from staphylococcus aureus3 subsp. aureus mrsa252
4c5wyrA_



6.2 33
PDB header:transferase
Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase;
PDBTitle: crystal structure and catalytic mechanism of the essential m1g37 trna2 methyltransferase trmd from pseudomonas aeruginosa
5c3iefA_



6.1 40
PDB header:transferase, rna binding protein
Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase;
PDBTitle: crystal structure of trna guanine-n1-methyltransferase from bartonella2 henselae using mpcs.
6c4h3zA_



5.7 33
PDB header:transferase
Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase;
PDBTitle: crystal structure of a symmetric dimer of a trna (guanine-(n(1)-)-2 methyltransferase from burkholderia phymatum bound to s-adenosyl3 homocystein in both half-sites
7d1p9pa_



5.5 33
Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:tRNA(m1G37)-methyltransferase TrmD
8d1uala_



5.4 33
Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:tRNA(m1G37)-methyltransferase TrmD
9c3quvB_



5.4 33
PDB header:transferase
Chain: B: PDB Molecule:trna (guanine-n(1)-)-methyltransferase;
PDBTitle: crystal structure of a trna-guanine-n1-methyltransferase from2 mycobacterium abscessus

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below