Phyre 2 Results for RVBD1669_(-)_1895732

Email	mdejesus@rockefeller.edu
Description	RVBD1669_(-)_1895732_1896094
Date	Fri Aug 2 13:30:26 BST 2019
Unique Job ID	562584ca525bc836
Sequence	MSRRPGYSNG ... Download FASTA
Job Type	normal
Job Expiry

Summary

Top model

Image coloured by rainbow N → C terminus

Model dimensions (Å):

X:27.354 Y:31.346 Z:29.446

Model (left) based on template c4er8A_

Top template information

PDB header:dna binding protein/dna
Chain: A: PDB Molecule:tnparep for protein;
PDBTitle: structure of the rep associates tyrosine transposase bound to a rep2 hairpin

Confidence and coverage

Confidence:

46.1%

Coverage:

28%

33 residues ( 28% of your sequence) have been modelled with 46.1% confidence by the single highest scoring template.

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3D viewing

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Sequence analysis

Download FASTA version

Secondary structure and disorder prediction [Show]

Domain analysis [Show]

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence	M	S	R	R	P	G	Y	S	N	G	R	A	G	A	S	R	Q	A	A	R	G	G	S	A	G	A	S	S	V	A	F	S	S	Q	P	N	C	G	L	T	E	S	V	L	G	H	Q	V	T	G	I	C	L	G	T	I	H	L	D	A
Secondary structure
SS confidence
Disorder	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?			?	?
Disorder confidence

	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence	M	Q	W	P	W	S	S	A	Y	R	L	E	P	A	V	A	T	T	L	I	G	I	S	A	W	W	A	N	G	S	V	K	Q	Y	A	G	D	L	T	D	R	V	A	T	M	T	V	C	R	R	T	P	A	P	R	V	H	Y	R	Q
Secondary structure
SS confidence
Disorder																																														?		?	?					?	?	?	?	?	?	?
Disorder confidence


Sequence
Secondary structure
SS confidence
Disorder
Disorder confidence

PDB 4er8 chain A

PDB 1f3k chain A