Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1671_(-)_1896482_1896874
DateFri Aug 2 13:30:27 BST 2019
Unique Job ID0658374469ee85c2
SequenceMPTVGPADHA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:19.128 Y:14.265 Z:61.102
Model (left) based on template c2m67A_
Top template information
PDB header:transport protein
Chain: A: PDB Molecule:merf;
PDBTitle: full-length mercury transporter protein merf in lipid bilayer2 membranes
Confidence and coverage
Confidence: 67.0% Coverage: 32%
42 residues ( 32% of your sequence) have been modelled with 67.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2m67A_



67.0 19
PDB header:transport protein
Chain: A: PDB Molecule:merf;
PDBTitle: full-length mercury transporter protein merf in lipid bilayer2 membranes
2c6btmF_



50.1 18
PDB header:membrane protein
Chain: F: PDB Molecule:alternative complex iii subunit f;
PDBTitle: structure of alternative complex iii from flavobacterium johnsoniae2 (wild type)
3c5n9yB_



41.1 10
PDB header:membrane protein
Chain: B: PDB Molecule:zinc transport protein zntb;
PDBTitle: the full-length structure of zntb
4c4ev6E_



19.3 13
PDB header:metal transport
Chain: E: PDB Molecule:magnesium transport protein cora;
PDBTitle: the complete structure of cora magnesium transporter from2 methanocaldococcus jannaschii
5d2e9xb2



15.3 27
Fold:GINS/PriA/YqbF domain
Superfamily:PriA/YqbF domain
Family:PSF2 N-terminal domain-like
6d2axtj1



15.2 30
Fold:Single transmembrane helix
Superfamily:Photosystem II reaction center protein J, PsbJ
Family:PsbJ-like
7c3a0hJ_



15.2 30
PDB header:electron transport
Chain: J: PDB Molecule:photosystem ii reaction center protein j;
PDBTitle: crystal structure of i-substituted photosystem ii complex
8c2hn8A_



11.5 30
PDB header:viral protein
Chain: A: PDB Molecule:protein pb1-f2;
PDBTitle: structural characterization and oligomerization of pb1-f2,2 a pro-apoptotic influenza a virus protein
9c6humQ_



11.3 58
PDB header:proton transport
Chain: Q: PDB Molecule:proton-translocating nadh-quinone dehydrogenase subunit q
PDBTitle: structure of the photosynthetic complex i from thermosynechococcus2 elongatus
10c2bbjB_



10.4 12
PDB header:metal transport/membrane protein
Chain: B: PDB Molecule:divalent cation transport-related protein;
PDBTitle: crystal structure of the cora mg2+ transporter
11c1k6nH_



9.9 37
PDB header:photosynthesis
Chain: H: PDB Molecule:photosynthetic reaction center h subunit;
PDBTitle: e(l212)a,d(l213)a double mutant structure of photosynthetic reaction2 center from rhodobacter sphaeroides
12c2lcoA_



9.8 29
PDB header:membrane protein
Chain: A: PDB Molecule:walp19-p8 peptide;
PDBTitle: 1h and 15n assignments of walp19-p8 peptide in sds micelles
13c2y0mB_



9.1 22
PDB header:transcription
Chain: B: PDB Molecule:male-specific lethal 1 homolog;
PDBTitle: crystal structure of the complex between dosage2 compensation factors msl1 and mof
14d1y5ic1



8.6 19
Fold:Heme-binding four-helical bundle
Superfamily:Respiratory nitrate reductase 1 gamma chain
Family:Respiratory nitrate reductase 1 gamma chain
15c2a2bA_



8.5 40
PDB header:antibiotic
Chain: A: PDB Molecule:bacteriocin curvacin a;
PDBTitle: curvacin a
16c1eysH_



8.4 26
PDB header:electron transport
Chain: H: PDB Molecule:photosynthetic reaction center;
PDBTitle: crystal structure of photosynthetic reaction center from a2 thermophilic bacterium, thermochromatium tepidum
17c2lcnA_



8.1 29
PDB header:membrane protein
Chain: A: PDB Molecule:walp19-p10 peptide;
PDBTitle: 1h and 15n assignments of walp19-p10 peptide in sds micelles
18c6gcs6_



7.5 21
PDB header:oxidoreductase
Chain: 6: PDB Molecule:nd6 subunit (nu6m);
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
19d1ft8e_



7.4 33
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Non-canonical RBD domain
20c4n9nA_



7.1 44
PDB header:transcription
Chain: A: PDB Molecule:sterol uptake control protein 2, lysozyme;
PDBTitle: crystal structure of saccharomyces cerevisiae upc2 transcription2 factor fused with t4 lysozyme
21c6nbxG_



not modelled 6.9 18
PDB header:oxidoreductase
Chain: G: PDB Molecule:nadh-quinone oxidoreductase subunit j;
PDBTitle: t.elongatus ndh (data-set 2)
22c5uzlA_



not modelled 6.8 21
PDB header:transferase
Chain: A: PDB Molecule:o-acyltransferase;
PDBTitle: brassica napus dgat1 exosite
23c3fseB_



not modelled 6.6 20
PDB header:hydrolase
Chain: B: PDB Molecule:two-domain protein containing dj-1/thij/pfpi-like and
PDBTitle: crystal structure of a two-domain protein containing dj-1/thij/pfpi-2 like and ferritin-like domains (ava_4496) from anabaena variabilis3 atcc 29413 at 1.90 a resolution
24c5b2gG_



not modelled 6.6 30
PDB header:membrane protein
Chain: G: PDB Molecule:endolysin,claudin-4;
PDBTitle: crystal structure of human claudin-4 in complex with c-terminal2 fragment of clostridium perfringens enterotoxin
25c2e9xF_



not modelled 6.4 27
PDB header:replication
Chain: F: PDB Molecule:dna replication complex gins protein psf2;
PDBTitle: the crystal structure of human gins core complex
26d2p7tc1



not modelled 6.4 43
Fold:Voltage-gated potassium channels
Superfamily:Voltage-gated potassium channels
Family:Voltage-gated potassium channels
27c6c5wA_



not modelled 6.3 18
PDB header:membrane protein
Chain: A: PDB Molecule:calcium uniporter;
PDBTitle: crystal structure of the mitochondrial calcium uniporter
28c3uk7B_



not modelled 6.2 22
PDB header:transferase
Chain: B: PDB Molecule:class i glutamine amidotransferase-like domain-containing
PDBTitle: crystal structure of arabidopsis thaliana dj-1d
29c6ithA_



not modelled 6.1 33
PDB header:membrane protein
Chain: A: PDB Molecule:syndecan-2;
PDBTitle: structure of the transmembrane domain of syndecan 2 in micelles
30c6bymA_



not modelled 6.0 40
PDB header:lipid transport
Chain: A: PDB Molecule:sterol-binding protein;
PDBTitle: crystal structure of the sterol-bound second start domain of yeast2 lam4
31c3n23E_



not modelled 6.0 33
PDB header:hydrolase
Chain: E: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a;
PDBTitle: crystal structure of the high affinity complex between ouabain and the2 e2p form of the sodium-potassium pump
32c6ceiA_



not modelled 5.8 86
PDB header:toxin
Chain: A: PDB Molecule:g117;
PDBTitle: solution nmr structure of conotoxin g117 from conus geographus
33c5kgmA_



not modelled 5.6 57
PDB header:isomerase
Chain: A: PDB Molecule:2,3-bisphosphoglycerate-independent phosphoglycerate
PDBTitle: 2.95a resolution structure of apo independent phosphoglycerate mutase2 from c. elegans (monoclinic form)
34c4g4sP_



not modelled 5.5 23
PDB header:hydrolase/chaperone
Chain: P: PDB Molecule:proteasome assembly chaperone 2;
PDBTitle: structure of proteasome-pba1-pba2 complex
35c3jc7B_



not modelled 5.4 27
PDB header:hydrolase
Chain: B: PDB Molecule:dna replication complex gins protein psf2;
PDBTitle: structure of the eukaryotic replicative cmg helicase and pumpjack2 motion
36c6d80A_



not modelled 5.2 16
PDB header:transport protein
Chain: A: PDB Molecule:mitochondrial calcium uniporter;
PDBTitle: cryo-em structure of the mitochondrial calcium uniporter from n.2 fischeri bound to saposin
37c3k9tA_



not modelled 5.1 18
PDB header:hydrolase
Chain: A: PDB Molecule:putative peptidase;
PDBTitle: crystal structure of putative peptidase (np_348812.1) from clostridium2 acetobutylicum at 2.37 a resolution

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below